Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01072 and BL00489
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_01072___ydjM.1.5803.seq
# -bsequence dna-align/BL00489___ydjM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01072___ydjM-BL00489___ydjM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01072___ydjM-BL00489___ydjM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01072___ydjM
# 2: BL00489___ydjM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity: 273/423 (64.5%)
# Similarity: 273/423 (64.5%)
# Gaps: 54/423 (12.8%)
# Score: 925.0
#
#
#=======================================
BSNT_01072___ 1 -------------------------------ATGT-----TGAAGAAAGT 14
||.| |||||||..|
BL00489___ydj 1 ATGTCAGAAAAAAATCCCATTCACGGAGGATATTTTTATATGAAGAAGAT 50
BSNT_01072___ 15 CATTTTAGCCGCTTTTATCTTAGTAGGAAG--TACT-TTGGGAGCTTTTA 61
..||||..|.|.||||.|.||.|.|||.|| |.|| ||| |||||||
BL00489___ydj 51 ACTTTTTTCTGTTTTTGTTTTGGCAGGCAGCTTGCTATTG---GCTTTTA 97
BSNT_01072___ 62 GTTTTTCATCAGATGCCAGTG------CGAAACATGTGAACGGAAATATT 105
.||||.|....||.||.|||| |||||.|.||.|.|||..||||.
BL00489___ydj 98 ATTTTGCCGGTGAAGCGAGTGCTAAAACGAAAAAAGTCAGCGGCTATATC 147
BSNT_01072___ 106 ACTTGGTATAACGGAGTCGGGAAAAAAGGCTCTTCAGGTAAGAAACTTGG 155
||||||||.||||||||.||.||||..|||.||...||.||||..||.||
BL00489___ydj 148 ACTTGGTACAACGGAGTGGGCAAAATCGGCGCTGACGGCAAGAGGCTCGG 197
BSNT_01072___ 156 ACATTGGGATTGTGCGACCAAAATCGGATTTGATGTTCCTAGAAACGGGA 205
.||||||||.||.||.||.||.||.||.||.||||||||.|||||.||.|
BL00489___ydj 198 CCATTGGGACTGCGCCACAAAGATGGGCTTCGATGTTCCGAGAAAAGGCA 247
BSNT_01072___ 206 CAAAAATCAGAGCTTATGCAAAAGCGAAGCCTAAAAAGGTGATTACGGTT 255
|||||||.|||||.|||.|||||||.||.||..|.||.||.|||||.||.
BL00489___ydj 248 CAAAAATAAGAGCCTATTCAAAAGCAAAACCGCACAAAGTCATTACAGTC 297
BSNT_01072___ 256 TATAAAAATGATGTTGGCAGAATGCCTAATGCAGTGCTGGATGTTAGCCC 305
||||||.|||||||.|||||||||||....||.||..|||||||.|||||
BL00489___ydj 298 TATAAATATGATGTCGGCAGAATGCCGGGCGCTGTTTTGGATGTAAGCCC 347
BSNT_01072___ 306 TAAAGCGTTTAAAGCGCTTGGATACCCATTAAGCAAAGGTAAAGTAGCGG 355
.|||||.||||.|||..|.||||..||...|||||||||.||.|||||.|
BL00489___ydj 348 GAAAGCTTTTAGAGCTTTGGGATTTCCGACAAGCAAAGGAAAGGTAGCCG 397
BSNT_01072___ 356 GGCATTACAGCTATTAA------ 372
|.|||||.|..|||.||
BL00489___ydj 398 GACATTATACATATAAAAAATAG 420
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