Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01079 and BL00480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_01079.1.5803.seq
# -bsequence dna-align/BL00480___yeaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01079-BL00480___yeaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01079-BL00480___yeaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01079
# 2: BL00480___yeaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1134
# Identity: 527/1134 (46.5%)
# Similarity: 527/1134 (46.5%)
# Gaps: 429/1134 (37.8%)
# Score: 1039.0
#
#
#=======================================
BSNT_01079 0 -------------------------------------------------- 0
BL00480___yea 1 ATGGCATCTGCTAAACTGCAGCAGCGATTGGATCAATATAAAGCAATTTA 50
BSNT_01079 1 -------TT-------GATTT------------------TCAGCG----T 14
|| ||||| |||||| |
BL00480___yea 51 CTCTGAGTTAAAAAGCGATTTAAAATGGAAAGTCACAGATCAGCGGACAT 100
BSNT_01079 15 TTATGAT--TTG---------------------AGCAGC----------- 30
|.||||| ||| |||.||
BL00480___yea 101 TAATGATGATTGCTTCCATGTATGTCGTCAACAAGCGGCCTTTTGATAAA 150
BSNT_01079 31 ----------TATATCAAA---------TCAAACATCGGCAGC------- 54
||.|||..| ||||||| |||.||
BL00480___yea 151 GAACGGTTTTTAAATCTGAGTGAGGCTGTCAAACA--GGCCGCCGGTACA 198
BSNT_01079 55 TTCTCAACACTCAATTCACACCACCGCTTTACTGTTGCATCTATTCTGGA 104
||.||..|..|.|..|||..|||.||||..|||.||||..||||..|.||
BL00480___yea 199 TTTTCGCCGTTGAGGTCAGCCCATCGCTACACTTTTGCCGCTATGTTTGA 248
BSNT_01079 105 CATTCATTTTCAGCAT-GAGGCAAAAC---AAA--CATTTCATA-CTTTT 147
|.|.| ||.| || |.||| ||| |||.|||.| |||||
BL00480___yea 249 CGTAC-------GCTTCGA---AGAACCTGAAACGCATATCAGACCTTTT 288
BSNT_01079 148 ATC------GATGTATACAATGA-----AATGG--TGAAGCTAGGATATA 184
.|| .||||| |.||||| ||.|| |.| |.|.|
BL00480___yea 289 TTCACTCTTTATGTA-AAAATGACCGGCAACGGATTCA-------AAAAA 330
BSNT_01079 185 AGCGGGATATGTTCACATACCTTTCCGCTCTGA-TCTTGCTCACCGGCAA 233
|| |||.|||||.||..|.||||||||.| |||
BL00480___yea 331 AG-----TATTTTCACTTATTTGTCCGCTCTTATTCT------------- 362
BSNT_01079 234 ATCTGAAACGACAAACCAAAAAGAACAGATGAACATG------------- 270
|.|| ||.|.|.|||...|.||.| ||||.||||
BL00480___yea 363 -TTTG--ACAAAATACCGTGATGAGC--ATGATCATGACAGCAAAATCAA 407
BSNT_01079 271 --GGGCTAGCAGTTTATC---------AGCAGATGAAGAAAAATCA---T 306
|||| |||.|| ||.| ||||||.|.||.|| |
BL00480___yea 408 TCGGGC------TTTGTCTATTTACAAAGGA-ATGAAGGACAAGCACGTT 450
BSNT_01079 307 TATTT--CCTC--------ACTTCAACTCAGAATGTTCCGCTTGCCGTAC 346
|.||| |.|| |||.| |||||..||||.|
BL00480___yea 451 TTTTTAACATCTGCCGGCGACTAC-------------CCGCTCTCCGTGC 487
BSNT_01079 347 TGCTTGG-------AGAAAACGGA-AAAGGT-------TTGCAGGCGCTA 381
| .|||| || |.|.||| |.|||| ||| .|||
BL00480___yea 488 T-TTTGGCCGGTTCAG-ATATGGAGACAGGTGAACTGATTG-----ACTA 530
BSNT_01079 382 CA--GAAGGCGGAAACATGCTATCAGCTGCTGGCAGCCAACGGC----TT 425
.| |||| |.|..||.||...||| .|.||| ||| ||
BL00480___yea 531 TATCGAAG-------CGTTTTACCAAAAGCT--TAACCA--GGCGGGTTT 569
BSNT_01079 426 TAAAAAAGGACAGTACTTACA---TCAGGTCAGCCATAT--TCTGGCCT- 469
|...|||||..|..|.||.|| || |||||||.|| |||.||.|
BL00480___yea 570 TCGCAAAGGGAACGATTTGCAGTTTC---TCAGCCACATCCTCTCGCTTA 616
BSNT_01079 470 TGCAAAGTGAAAAAGAGCCCGAAATGCTTGT-TTCCGCTTGCAAACAGAT 518
||| ..||..|.||..|.||...|||||| ..|||| |.|...|.|||
BL00480___yea 617 TGC---CGGAGCAGGATTCAGATCAGCTTGTCGCCCGC-TCCCTCCGGAT 662
BSNT_01079 519 ATATCAATCGATCACTGAATCTGTCAAAAA----------ACCAAAGGAT 558
||| ||| ||||| ||.|||||| |||||||..|
BL00480___yea 663 ATA-----CGA----TGAAT-TGACAAAAAAGCATAAAAGACCAAAGCCT 702
BSNT_01079 559 TATCATTATCCAGACCTTGCTCTCCTCACATTTCT----------GGAAG 598
...|||||.||.||..|.|..||.|||.|..|.|| |.||.
BL00480___yea 703 GTCCATTACCCGGAAATCGGACTGCTCGCGCTGCTTGAGAACGGCGAAAA 752
BSNT_01079 599 AGCCAGATATCAAAACGGTTTTGTG-CATCACT---------GACGAATT 638
||.||.|.| || ||||||| |.||.|||
BL00480___yea 753 AGACATAGA--------------TGCCATCACTATCATGGCAGGCGCATT 788
BSNT_01079 639 AAACCAG-GAAAAAGCT-TTTAAATGGCAAAAGGAAATGAATTTTAAAAT 686
.|| ||| ||.||| || ||.|..|||||.||.||.||||||.|.||||.
BL00480___yea 789 GAA-CAGCGATAAA-CTGTTCAGGTGGCAGAAAGACATGAATCTGAAAAC 836
BSNT_01079 687 TGCTGTCAGCCTCTATCTCAGTGAGCATATGGAGAAAAATC--------- 727
.||.||||.|.|.|| || ||||| ||||||.|
BL00480___yea 837 GGCCGTCAACTTGTA---CA-TGAGC-------GAAAAAACGGAAGACCC 875
BSNT_01079 728 --TGCTGATGGAATCAGGAC--TATACACCGCTATCGAAACAGTCATTCA 773
.|||..||||..||||.| |||..|.||| |.|||.|.||.|||||
BL00480___yea 876 GGCGCTTTTGGATACAGGGCTTTATCAAACGC--TTGAAGCTGTTATTCA 923
BSNT_01079 774 AGCGCAGCAGGCAGCCGCGACAGCT-GCCATCAT---CAGCTCAACAGCA 819
|||.||||||.|.||.||.| | |||||.|| .|||||..|.|||
BL00480___yea 924 AGCACAGCAGACGGCAGCAA----TCGCCATTATGACAAGCTCTGCTGCA 969
BSNT_01079 820 GC----CAGCCATA---CTCATGATGGAAACTAA 846
|| |||.||.| |||||.|
BL00480___yea 970 GCGTCTCAGGCAAACGGCTCATAA---------- 993
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