Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02075 and BL00469
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_02075___yjjA.1.5803.seq
# -bsequence dna-align/BL00469___hemD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02075___yjjA-BL00469___hemD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02075___yjjA-BL00469___hemD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02075___yjjA
# 2: BL00469___hemD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity: 562/873 (64.4%)
# Similarity: 562/873 (64.4%)
# Gaps: 105/873 (12.0%)
# Score: 1663.5
#
#
#=======================================
BSNT_02075___ 1 ATGGGAAAAGGGTT--ACTTGGAAAACGCGTGGCAATCGGTGGCTCACGA 48
.||||||||||.|| || ||.|.|.|..|.||.|||||.|..||.|||
BL00469___hem 1 TTGGGAAAAGGATTGAAC--GGCAGAAGAATTGCCATCGGAGCATCGCGA 48
BSNT_02075___ 49 AAAACGGAAGAAATTAGTACAATCATTGAAAAACAGGGCGGAATACCTGT 98
||||||||.|||||.||.||..|.||..||||.||.|||||..|.||..|
BL00469___hem 49 AAAACGGATGAAATGAGCACGCTGATCAAAAAGCAAGGCGGGGTTCCCCT 98
BSNT_02075___ 99 CATCCGGCCTCTCCAAGGTACAGTTTACTTAGC----AGAGAAGCAGGTG 144
|||.||..|.||.||.|||||.||.|..||.|| |.|||||.|||
BL00469___hem 99 CATTCGCTCCCTTCAGGGTACCGTGTTTTTGGCCGAAAAAGAAGTAGG-- 146
BSNT_02075___ 145 GAGCCGGATTTGCGGACGTTTGCGGAAGAAAA----AGCTGACTGGGTCA 190
.||.||||||||..|.||.|..| ||| |||.||||||||.|
BL00469___hem 147 --CCCTGATTTGCGTGCCTTCGTTG----AAACGGGAGCCGACTGGGTGA 190
BSNT_02075___ 191 TTTTCACGACAGGCATCGGGTTGGAGACTCTTGTCGATATGGCAGAGAAA 240
||||||||||.||.||||||..|||.||.||||||....|.||.||||||
BL00469___hem 191 TTTTCACGACCGGAATCGGGACGGAAACGCTTGTCAGCCTAGCTGAGAAA 240
BSNT_02075___ 241 ATTGGACTGAAAGAT----GAG---TTTCTGCAGGCCATTCGCCAAGCGA 283
.|||| ||| ||| |.|.|.||.||.||.|||...||||
BL00469___hem 241 CTTGG-------GATCGGAGAGCGCTATTTACAAGCGATCCGCAGGGCGA 283
BSNT_02075___ 284 AAGCGGCATGCCGGGGATACAAAACGCTGTCTGCGCTGAAAAAGCTTGGA 333
|||||||||...|.||.||||||||..|..|.||..|.||||||||.||.
BL00469___hem 284 AAGCGGCATCGAGAGGCTACAAAACAATCGCCGCTTTAAAAAAGCTCGGC 333
BSNT_02075___ 334 ATCACACCGGAAGCTTCGGATGAAGACGGGAC-AACAAGAGGCTTAATC- 381
||.||.||.|..||..|||||||||||||.|| |.|||| ||..|.|||
BL00469___hem 334 ATTACGCCCGTTGCGGCGGATGAAGACGGCACGACCAAG-GGACTGATCG 382
BSNT_02075___ 382 ---CGTTCCTTGGAGCCTCACGACTTTTCAGGAAAAACAGTCATGGTGCA 428
||.||| |..|.|||||.|||||.||.|||...||.|||||.||
BL00469___hem 383 ACTCGCTCC----AATCCCACGATTTTTCCGGCAAACGGGTGATGGTTCA 428
BSNT_02075___ 429 GCTTCATGGCGAAAAAGCGCCG-----GCTCTCATGGCATTTCTTGAAGA 473
|||.||.||||||||.||.||| ||| ||| .|||.|.|||||
BL00469___hem 429 GCTCCACGGCGAAAACGCTCCGTCACTGCT-TCA----GTTTTTGGAAGA 473
BSNT_02075___ 474 AAAAGGCGC-GTCTGTCCTGCCGATTCTGCCTTATCAGCACATCCCGCCG 522
.|||||.|| |.| ||..|.|||.|||||||.||||.|||..|..|.||.
BL00469___hem 474 GAAAGGTGCAGAC-GTTGTTCCGCTTCTGCCGTATCGGCATGTTGCTCCA 522
BSNT_02075___ 523 GAGGAGGAAACGGTGG----AGCAGTTATGCCGAGAGCTGATGAACGATG 568
||...||||||.||.| | ||.|||.|.|||.|.||.|||..||
BL00469___hem 523 GACCGGGAAACCGTCGCTTTA----TTGTGCAGCGAGATCATCAACCGTG 568
BSNT_02075___ 569 AGGTCGATGCCGTTTGTTTTACAACGGCCATTCAGGTTCGTTCCCTGTTT 618
|.||.|||||.|||||.|||||||||||..|.||.||.||.||.||.|||
BL00469___hem 569 AAGTGGATGCGGTTTGCTTTACAACGGCTGTCCAAGTCCGCTCGCTTTTT 618
BSNT_02075___ 619 GATTTTGCCAAGG-----GGC------GAGGTTATATCAATGAAGTGAAG 657
.||||.||.||.| ||| ||| || ||.||...
BL00469___hem 619 CATTTCGCGAAAGAAAACGGCTATGCGGAG--------AA--AATTGTTC 658
BSNT_02075___ 658 AAGGTATTCGAAGAACGCGCCATCGCAGCTGCTGTCGGAAAAGTGACTGC 707
||..|.||| ||||..|||...|.||.||.|||||||||||||||||.||
BL00469___hem 659 AATCTTTTC-AAGACAGCGTGTTGGCGGCCGCTGTCGGAAAAGTGACGGC 707
BSNT_02075___ 708 TGAAGCACTGCGGGAAGAGGGCATTACGA--GACTGCTTGCGCCAGAGAT 755
.|||||..|..|.|||||.||..| ||| |.||.||.||.||.||..|
BL00469___hem 708 AGAAGCTTTAAGAGAAGAAGGAGT--CGAACGCCTTCTCGCTCCGGATCT 755
BSNT_02075___ 756 TGAGCGGATGGGTGCGATGATTGTTGAGCTGGCCAAGTATTATGAA---G 802
.||.||||||||.|||||||||||.|||||.||...||.||||||| |
BL00469___hem 756 CGAACGGATGGGAGCGATGATTGTGGAGCTAGCGCGGTTTTATGAAACGG 805
BSNT_02075___ 803 AA-AAGGAATAA----------- 813
|| |.||.||||
BL00469___hem 806 AAGAGGGGATAAGAACACAGTAA 828
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