Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01170 and BL00449

See Amino acid alignment / Visit BSNT_01170 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:41
# Commandline: needle
#    -asequence dna-align/BSNT_01170___yezE.1.5803.seq
#    -bsequence dna-align/BL00449___yezE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01170___yezE-BL00449___yezE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01170___yezE-BL00449___yezE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01170___yezE
# 2: BL00449___yezE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 597
# Identity:     395/597 (66.2%)
# Similarity:   395/597 (66.2%)
# Gaps:          24/597 ( 4.0%)
# Score: 1175.0
# 
#
#=======================================

BSNT_01170___      1 TTGGGGAGGAATAAAGAATTTGATACGGCGCTTGTTCTTCACAGGGCGAT     50
                     |||||.||||..||||||||||||||.||.||.||.|||||.|..|||||
BL00449___yez      1 TTGGGAAGGAGCAAAGAATTTGATACCGCTCTCGTCCTTCATAAAGCGAT     50

BSNT_01170___     51 AGAGGTTTTTGGAGAGTATGGCTACGAAGGAACGTCTCTTCAGGATCTGC    100
                     .||||||||.||..|.|..|||||.||.||..||||..|.|||||.||||
BL00449___yez     51 GGAGGTTTTCGGCCAATTCGGCTATGAGGGGGCGTCGATGCAGGAGCTGC    100

BSNT_01170___    101 TCTCTCATTTAGGCATTGCGCGCCAAAGTTTGTATGATACGTATGGCACG    150
                     ||...|...|.||.|||||..|.||||||.||||..||.|.|..||.||.
BL00449___yez    101 TCAGCCGCCTGGGAATTGCCAGGCAAAGTCTGTACAATGCATTCGGGACT    150

BSNT_01170___    151 AAGCGTGATTTGTTTTTGTCCGCTGTGAAAACGTATCTTGAAGGGAAAAA    200
                     ||..|.|.|.|||||.|..||||..|.|.||..|||||.||.|..|||||
BL00449___yez    151 AAAAGGGGTCTGTTTATCGCCGCCCTTACAAGATATCTAGATGATAAAAA    200

BSNT_01170___    201 CACTGC---CGTTATGGAAAGGCTTGAATCGCCAGGATCTGTAAAGGAAG    247
                        |||   .||.||.|..|.|||||||...||.|||||.||.|||.||.
BL00449___yez    201 ---TGCGCAAGTGATCGCCATGCTTGAAAGCCCCGGATCAGTGAAGCAAT    247

BSNT_01170___    248 CCATTCGTAATATTTTTCAAGAAGGTGTCAATGCTTTGAGGGATCCTGAA    297
                     |..||||..|.||.||.||.|||.|..|.||.|.|.|||..||.||.|||
BL00449___yez    248 CGGTTCGGCAGATCTTCCAGGAAAGCTTAAACGTTCTGAAAGACCCCGAA    297

BSNT_01170___    298 CGGGCGAAGGCGTGCTATATCATTAACAGCGCGATTGAACAGATTCCGCA    347
                     ||..|.|||||.|||||||||||.||||||||.||||||||.|||||.|.
BL00449___yez    298 CGTTCAAAGGCATGCTATATCATCAACAGCGCAATTGAACAAATTCCCCG    347

BSNT_01170___    348 TGACCCTGAGCTTGCCCGGTATTTTGA----CAGACAATCCAAGCAGCTT    393
                     .||.||.|||.|||||...||.||.||    ||||||    ||||||.|.
BL00449___yez    348 CGATCCGGAGGTTGCCGAATACTTCGATAAGCAGACA----AAGCAGTTG    393

BSNT_01170___    394 GAGGACGCTTTTTATCAGGCGCTTTTAAGGGCGAAGGATCAAGGAGAATT    443
                     ||...|||.|||||..|.||||||.|..|.||..||...||.||.|||.|
BL00449___yez    394 GAAACCGCCTTTTACAAAGCGCTTGTCCGAGCACAGTCACAGGGGGAACT    443

BSNT_01170___    444 GAATGGCGAAGATAC----TGATATAACTGCGCTTGCCCGTTACCTGAAT    489
                     .||    ||||...|    ||||.|..|.||..|||||||||...|||||
BL00449___yez    444 AAA----GAAGGGCCTCCATGATCTTTCAGCAGTTGCCCGTTTTTTGAAT    489

BSNT_01170___    490 CAAAGCAGGCTGTCTCTGACATTTGTTGCGAAAGTGACGGCTGATATGGA    539
                     ||||.|.|||||||.||.||.|||...|||||..|.||||..|||.|.||
BL00449___yez    490 CAAACCCGGCTGTCGCTCACGTTTCAGGCGAAGTTAACGGGGGATTTTGA    539

BSNT_01170___    540 TCGGCTTCAGAACCATG-TTGACGTGAGTTTATCAGTGCTTGATTAA    585
                     |...||||||.|.| || |.||.||.||..|.||..|.|||||||.|
BL00449___yez    540 TGCCCTTCAGGATC-TGATCGATGTCAGCCTGTCTATTCTTGATTGA    585


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