Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05207 and BL00448
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:20
# Commandline: needle
# -asequence dna-align/BSNT_05207___yveA.1.5803.seq
# -bsequence dna-align/BL00448___yveA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05207___yveA-BL00448___yveA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05207___yveA-BL00448___yveA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05207___yveA
# 2: BL00448___yveA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1608
# Identity: 1155/1608 (71.8%)
# Similarity: 1155/1608 (71.8%)
# Gaps: 75/1608 ( 4.7%)
# Score: 4071.5
#
#
#=======================================
BSNT_05207___ 1 ATGTCTAAACAAGGAAATTTTCAAAAATCAATGTCGCTGTTTGATCTGAT 50
.||||.||.||.||.|||||..|||||.|.||.||.|||.||||.|||||
BL00448___yve 1 TTGTCAAATCAGGGCAATTTCAAAAAAACGATCTCTCTGCTTGACCTGAT 50
BSNT_05207___ 51 TTTGATTGGGATGGGAGCCATCTTTGGATCAGCGTGGCTGTTCGCTGTCA 100
||||||.||.|||||.||.||.||.|||||.||.||||||||.||.||||
BL00448___yve 51 TTTGATCGGCATGGGTGCGATATTCGGATCGGCTTGGCTGTTTGCCGTCA 100
BSNT_05207___ 101 GTAATGTCGCTTCAAAAGCAGGGCCCTCCGG-CGCTTTTTCCTGGATCCT 149
|.|||||||||||||||||.||||||.|.|| .|| |||||.|||||..|
BL00448___yve 101 GCAATGTCGCTTCAAAAGCCGGGCCCGCTGGAAGC-TTTTCGTGGATTAT 149
BSNT_05207___ 150 CGGAGGAGCCATTATTTTGTTAATCGGGCTCGTATATGCAGAGCTCGGAG 199
|||.||.|.||||||..|.||||||||.|||||.|||||.|||||.||||
BL00448___yve 150 CGGCGGCGTCATTATCCTTTTAATCGGCCTCGTTTATGCCGAGCTGGGAG 199
BSNT_05207___ 200 CCGCTCTGCCCCGTACCGGAGGCATCATTCGATACCCCGTTTATTCACAT 249
|.||..||||.||.||.||.||.||.||.||.||.||.||.|||.|.||.
BL00448___yve 200 CTGCGTTGCCGCGGACGGGCGGGATTATCCGCTATCCGGTGTATACCCAC 249
BSNT_05207___ 250 GGCCACCTTGTCGGCTACTTAATTTCGTTTGTCACGATTGTCGCTTATAC 299
||||||||||||||.||.||.|||||.|||.||||||||||.||.|||||
BL00448___yve 250 GGCCACCTTGTCGGATATTTGATTTCATTTATCACGATTGTTGCCTATAC 299
BSNT_05207___ 300 AAGCTTGATTTCAATTGAAGTGACAGCTGTGCGCCAGTATGTGGCCTATT 349
||||.|||||||.||.||||||||.|||||..|.||.||.||.|||||||
BL00448___yve 300 AAGCCTGATTTCGATCGAAGTGACGGCTGTCAGGCAATACGTAGCCTATT 349
BSNT_05207___ 350 GGTTTCCCGGCCTGACCATTAAAGGGTCTGATTCGCCGACCATTTCCGGC 399
||||||||||..||||.||.|||||.|||||.||||||||.|||..||||
BL00448___yve 350 GGTTTCCCGGTTTGACGATAAAAGGTTCTGAATCGCCGACGATTATCGGC 399
BSNT_05207___ 400 TGGATCTTGCAATTTGCCCTATTATGCTTGTTTTTCCTGCTGAATTATTG 449
|||.|.|||||.|||||.||..|.||.|||||.||..|.|||||||||||
BL00448___yve 400 TGGCTTTTGCAGTTTGCGCTGCTTTGTTTGTTCTTTTTACTGAATTATTG 449
BSNT_05207___ 450 GAGCGTCAAAACCTTCGCTAAGGCGAATTTCATCATATCGATTTTTAAAT 499
|||.||||||.|.||.||.||..|.|||||.||.||.|||.|||||||.|
BL00448___yve 450 GAGTGTCAAAGCGTTTGCGAAATCAAATTTAATTATTTCGGTTTTTAAGT 499
BSNT_05207___ 500 ATATTGTGCCGATTACCATCATTATTGTGCTGATCTTTCATTTTCAGCCG 549
||.||||.||..|.||.|||||.||.|||.||||.||.||||||.|..||
BL00448___yve 500 ATTTTGTTCCTTTGACAATCATCATCGTGTTGATATTCCATTTTAAATCG 549
BSNT_05207___ 550 GAGAATTTATCCGTTCAAGGATTTGCACCGTTTGGATTTACAGGTATTCA 599
|.|||.||..|.| .||.||||||.||||||||.|||...||..||||
BL00448___yve 550 GCGAACTTTGCGG---GAGAATTTGCGCCGTTTGGCTTTGGCGGGGTTCA 596
BSNT_05207___ 600 GGCTGCCATCTCGACAGGCGGCGTCATGTTTGCGTATCTCGGCCTGCACC 649
|.|..||||.|||||.|||||.||.|||||.||.||.|||||.||.||.|
BL00448___yve 597 GACATCCATTTCGACCGGCGGGGTGATGTTCGCATACCTCGGTCTACATC 646
BSNT_05207___ 650 CGATTGTATCTGTAGCAGGTGAAGTCCAAAATCCAAAACGCAATATCCCG 699
||||.||.||.||.||.||.|||||..|||||||..|.||.||.||||||
BL00448___yve 647 CGATCGTTTCGGTCGCCGGCGAAGTGAAAAATCCGCAGCGGAACATCCCG 696
BSNT_05207___ 700 ATCGCTTTAATCATTTGCATCATCGTTTCAACCATCATTTATACTGTTTT 749
.|.|||.|..|.|||||||||||.|||||..|...|.|.|||||..|..|
BL00448___yve 697 GTTGCTCTGCTGATTTGCATCATTGTTTCGGCTTGCGTCTATACGATACT 746
BSNT_05207___ 750 GCAGGTCACCTTTATTGGTGCAATCCCGACAGAAACACTGAAACATGGCT 799
|||.||....|||||.||.||.||.|||||.||.|..||.||..|.||.|
BL00448___yve 747 GCAAGTGGTGTTTATCGGAGCCATACCGACTGATATGCTAAATGACGGAT 796
BSNT_05207___ 800 GGCCGGCAATTGGCCGGGAGTTCTCATTGCCGTTTAAGGATATTGCGGTC 849
||...||.||.|||.||||.||.||..|.||||||||.|||||.|||||.
BL00448___yve 797 GGAAAGCGATCGGCAGGGAATTTTCTCTTCCGTTTAAAGATATCGCGGTG 846
BSNT_05207___ 850 ATGCTCGGGTTAGGCTGGCTTGCAACGCTTGTCATTTTAGACGCCATTCT 899
.||||||||.|.|||||||||||.||.||||||.||.|.||.||.|||.|
BL00448___yve 847 CTGCTCGGGATGGGCTGGCTTGCCACTCTTGTCGTTCTGGATGCGATTTT 896
BSNT_05207___ 900 GTCTCCCGGAGGAAACGGGAATATCTTTATGAATACGACATCCCGCCTTG 949
.||.|||||.||||||||.|||||.|||||||||||.|||||.|||.|.|
BL00448___yve 897 ATCACCCGGCGGAAACGGCAATATTTTTATGAATACAACATCGCGCTTGG 946
BSNT_05207___ 950 TTTACGCCTGGGCGCGTAACGGCACATTATTTGGCATATTCT---CAAAG 996
||||.||.||||||||.|||||||||||.|| ||.|.||| |.|||
BL00448___yve 947 TTTATGCATGGGCGCGGAACGGCACATTGTT---CAAAATCTTTGCCAAG 993
BSNT_05207___ 997 GTCAATAAAGATACGGGGACACCCCGCGCTTCGCTTTGGCTTTCGTTTGC 1046
||.||||||...|||||.|..||.||..|.|||.|.|||||.||||||||
BL00448___yve 994 GTGAATAAACCAACGGGAATTCCGCGTCCGTCGTTGTGGCTGTCGTTTGC 1043
BSNT_05207___ 1047 CCTGTCCATTTTCTGGACACTTCCCTTTCCTTCGTGGAATGCGCTCGTCA 1096
.||..||.||||.|||||.|||||.|||||.||.|||.|.||||||||||
BL00448___yve 1044 GCTCGCCGTTTTTTGGACGCTTCCGTTTCCGTCTTGGGACGCGCTCGTCA 1093
BSNT_05207___ 1097 ATGTCTGTTCAGTCGCGCTCATTCTTTCATATGCGATTGCACCCATTTCT 1146
||||.||.||.||.||.||.||.||.||.|||||||||||.||..||||.
BL00448___yve 1094 ATGTTTGCTCTGTTGCCCTGATCCTCTCCTATGCGATTGCTCCGGTTTCA 1143
BSNT_05207___ 1147 TCAGCTGCGCTGAGGGTCAACGCGAAGGA-CTTAAACAGGCCGTTTTATT 1195
.||||.|||||||..||.||.||.|||.| |||||| |.|||..|..|..
BL00448___yve 1144 GCAGCGGCGCTGAATGTGAATGCCAAGCAGCTTAAA-AAGCCTCTGCAAA 1192
BSNT_05207___ 1196 TAAAAGGAATGAGTATTATCGGGCCGCTTTCCTTTATATTTACAGCGTTT 1245
|.|||||||||..|.|.||||..||..|.|||||.||||||.|..|||.|
BL00448___yve 1193 TCAAAGGAATGGCTGTCATCGCTCCTGTCTCCTTCATATTTGCGTCGTAT 1242
BSNT_05207___ 1246 ATCGTGTACTGGTCAGGATGGAAAACAGTCTCCTGGCTGCTCGGTTCACA 1295
|||||.||.||||||||.|||||.||.||.||.|||||||||||.|||||
BL00448___yve 1243 ATCGTCTATTGGTCAGGGTGGAACACCGTGTCATGGCTGCTCGGATCACA 1292
BSNT_05207___ 1296 GCTCGTGATGTTTTTGATCTATCTCTGTTTCA----GC-----AAATATA 1336
|||.||||||||| .|||||| | || |||.|||
BL00448___yve 1293 GCTTGTGATGTTT----------GCTGTTT-ATTGCGCGTGTAAAAAATA 1331
BSNT_05207___ 1337 CG--CCTAAAGAAGATGTCAGCCTC----GCTCAGCAGCTGAAATCAGCC 1380
|| ||..|.||.||||| .|| ||.||||||||.||||||..|
BL00448___yve 1332 CGTTCCGCAGGACGATGT----TTCGTTTGCACAGCAGCTTAAATCAAGC 1377
BSNT_05207___ 1381 TGGTGGCTTATCGGGTTTTATATTATGATGCTGATCTTTTCCTACATCGG 1430
||||||.|..||||.|.||||.|.|||.|.|||||.|| ||||.
BL00448___yve 1378 TGGTGGATCGTCGGATATTATGTGATGCTCCTGATTTT-------ATCGT 1420
BSNT_05207___ 1431 TTCT-------TTCGGACATGGTTTAGGGATTATCAGCAATCCCGTCGAC 1473
|||| |||||..|.||..|.||..|..|.||.|..||.|||||.
BL00448___yve 1421 TTCTGGGCTCATTCGGTAACGGCCTTGGCCTATTGAGAACGCCGGTCGAT 1470
BSNT_05207___ 1474 CTCATTTTAGTCGCGATCGGCTCACTTGCGATTTATTACTGGGCAAAGTA 1523
.|.||.||..|||||.|.||.||..|||||.|.|.|||||||||.||.||
BL00448___yve 1471 TTAATCTTGATCGCGCTAGGATCGATTGCGGTATTTTACTGGGCGAAATA 1520
BSNT_05207___ 1524 TACCGGGCTCCCAAAAGCCGCCATTGATTACGAT---AAATAA------- 1563
|||.|.|||.|||||.||.|.|||||||||.||| |||.||
BL00448___yve 1521 TACGGCGCTGCCAAAGGCAGTCATTGATTATGATGAGAAAAAAGAAGAAA 1570
BSNT_05207___ 1563 -------- 1563
BL00448___yve 1571 CCGTTTAA 1578
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