Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02071 and BL00446
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_02071___yjiC.1.5803.seq
# -bsequence dna-align/BL00446___yjiC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02071___yjiC-BL00446___yjiC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02071___yjiC-BL00446___yjiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02071___yjiC
# 2: BL00446___yjiC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1279
# Identity: 808/1279 (63.2%)
# Similarity: 808/1279 (63.2%)
# Gaps: 188/1279 (14.7%)
# Score: 2341.5
#
#
#=======================================
BSNT_02071___ 1 ATG----AAAAAGTACCATATTTCGATGATCAATATCCCGGCGTACGGAC 46
||| |.||| |||||..||||..|.|||||.|||||..||||.|
BL00446___yji 1 ATGGGACATAAA----CATATCGCGATTTTTAATATTCCGGCTCACGGCC 46
BSNT_02071___ 47 ATGTCAATCCTACGCTTGCTTTAGTA-GAGAAGCTTTGTGAGAAA---GG 92
||.|.|||||.|||||.|||||| | |..||||.|||| .||| ||
BL00446___yji 47 ATATTAATCCAACGCTAGCTTTA--ACGGCAAGCCTTGT--CAAACGCGG 92
BSNT_02071___ 93 GCACCGTGTCACGTACGCGACGACTGAGGAGTTTGCGCCCGCTGTTCAGC 142
..|.||.||.||.||..||..|||.||.|||||||.|...||||||.||.
BL00446___yji 93 TTATCGGGTAACATATCCGGTGACGGATGAGTTTGTGAAGGCTGTTGAGG 142
BSNT_02071___ 143 AAGCCGGTGGAGAAGCATTGCT---CTATCATACATCCTTGAATATTGAT 189
||.|.||.|.|||..| ||| |||.|...||.|.||.|||||.|||
BL00446___yji 143 AAACTGGGGCAGAGCC---GCTCAACTACCGCTCAACTTTAAATATCGAT 189
BSNT_02071___ 190 CCTAAGCAAATCAGGGAGATGATGGAAAAGA--------ATG----ACGC 227
||..|||||||..|||||.|||||.||||.| ||| |.||
BL00446___yji 190 CCGCAGCAAATTCGGGAGCTGATGAAAAATAAAAAAGATATGTCGCAGGC 239
BSNT_02071___ 228 GCCCCTCAGCCTTTTGAAAGAATCACTCAGCA--TTCTGCCGCAGCTTGA 275
.||.||.|...||.|.|||||| |...||.| ||||.||.||||||||
BL00446___yji 240 TCCGCTGATGTTTATCAAAGAA--ATGGAGGAGGTTCTTCCTCAGCTTGA 287
BSNT_02071___ 276 GGAGTTATATAAGGATGATCAGCCTGATCTGATCATCTATGACTTTGTTG 325
.|.|.|.|||.||.||||..||||.||.||.|||.|.|.|||||||.|.|
BL00446___yji 288 AGCGCTCTATGAGAATGACAAGCCAGACCTTATCCTTTTTGACTTTATGG 337
BSNT_02071___ 326 CGCTGGCTGGTAAATTGTTTGCTGAAAAGCTT--AAT------GTTCCGG 367
|..||||.||.|||.||.|.|||||.|||.|| ||| |.||||
BL00446___yji 338 CCATGGCGGGAAAACTGCTGGCTGAGAAGTTTGGAATAGAGGCGGTCCG- 386
BSNT_02071___ 368 TCATTAAGCTCTGTTCGTCATATGCCCAAAATGAA-----TCCTTTCAGT 412
.||.|||||..|||||||.||.||.||| |.|.|||||
BL00446___yji 387 -------CCTTTGTTCTACATATGCACAGAACGAACATTTTACATTCAG- 428
BSNT_02071___ 413 TAGGAAATGAAGACA-TGCTGAAAAAAATAAGA--GAAGCAGAGGCTGAA 459
|..|| |.|||||.|...||||| || ||||
BL00446___yji 429 ----------ATCCATTTCTGAAGAGTTTAAGATCGA-------GCTG-- 459
BSNT_02071___ 460 TTTAAAGCCTACTTGGAGCAAGAGAAGTTGC-----------CGGCTGTT 498
|.|||| ||||||||| |.||| ||..|.||
BL00446___yji 460 ----ACGCCT-----GAGCAAGAG--GATGCTTTGAAAAATTCGAATCTT 498
BSNT_02071___ 499 ---TCATTTGAACAGTTAG---CTGT----GCCGGAAGCATTAAATATTG 538
|||||| |||..|.|| .||| |||.|.|..|||.||.||||
BL00446___yji 499 CCGTCATTT-AACTTTGAGGATATGTTCGAGCCTGCAAAATTGAACATTG 547
BSNT_02071___ 539 TCTTTATGCCGAAGT-CTTTTCAG--ATTCAGCATGAGACGTTCGATGAC 585
|||||||||| ..|| |||||||| .|.|.|| ||.|||||.|||||.
BL00446___yji 548 TCTTTATGCC-TCGTGCTTTTCAGCCTTACGGC--GAAACGTTTGATGAG 594
BSNT_02071___ 586 CGTTTCTGTTTTGTCGGCCCCTCTCTCGGAGAACGGA------AGGAGAA 629
||.||||.||||||.||.||.|||||.|...||||.| ||||.||
BL00446___yji 595 CGGTTCTCTTTTGTTGGTCCTTCTCTTGCCAAACGCAAGTTTCAGGAAAA 644
BSNT_02071___ 630 AGAAA-GCCTGTTGATT---GACA-AGGATGATCGCCCGCTTATGCTGAT 674
||||| ||| |.|.||| |||| .|| .||.||..|.||||||||
BL00446___yji 645 AGAAACGCC-GATTATTTCGGACAGCGG----CCGTCCTGTCATGCTGAT 689
BSNT_02071___ 675 TTCTTTGGGTACGGCGTTTAACACATGGCCGGAATTTTACAAGATGTGCA 724
.|||||.||.||||||||.||..|.||||||||||||||..|.|||||||
BL00446___yji 690 ATCTTTAGGGACGGCGTTCAATGCCTGGCCGGAATTTTATCATATGTGCA 739
BSNT_02071___ 725 TCAAGGCATTTCGGGATTCTTCA-----TGGCAAGTAATCATGTCGGTTG 769
|..|.|||||..|||| || |||||.||.||||||.|.||||
BL00446___yji 740 TAGAAGCATTCAGGGA-----CACGAAGTGGCAGGTTATCATGGCTGTTG 784
BSNT_02071___ 770 GGAAAACGATTGATCCAGAAAGCTTGGAGGATATTCCTGCTAACTTTACC 819
|.|..||.||.|||||.||||||||.||.||.||.||||..||||||.|.
BL00446___yji 785 GCACGACAATCGATCCTGAAAGCTTTGATGACATACCTGAGAACTTTTCG 834
BSNT_02071___ 820 ATTCGCCAAAGTGTGCCTCAGCTTGAGGTGTTAGAGAAAGCTGATTTGTT 869
||||..||..|.||.||||||||.|||.|..|..|||||||.||..||||
BL00446___yji 835 ATTCATCAGCGCGTTCCTCAGCTGGAGATCCTGAAGAAAGCGGAGCTGTT 884
BSNT_02071___ 870 CATCTCTCATGGCGGGATGAACAGTACGATGGAAGCGATGAACGCAGGTG 919
||||.|.|||||.||.|||||||||||||||||||.|.||||.||.||||
BL00446___yji 885 CATCACCCATGGGGGTATGAACAGTACGATGGAAGGGTTGAATGCCGGTG 934
BSNT_02071___ 920 TGCCGCTTGTCGTCATTCCGCAAATGTATGAGCAAGAGCTCACTGCAAAT 969
|.|||||.||.|.|.|||||||||||..|||.||.||..|||||||....
BL00446___yji 935 TACCGCTCGTTGCCGTTCCGCAAATGCCTGAACAGGAAATCACTGCCCGC 984
BSNT_02071___ 970 CGGGTTGATGAATTAGGCCTTGGCGTTTATTT---GCCGAAAGAGGAAGT 1016
||.||.||.||..|.||.||||||....|||| ||||.||||...|
BL00446___yji 985 CGCGTCGAAGAGCTTGGGCTTGGCAAGCATTTGCAGCCGGAAGACACA-- 1032
BSNT_02071___ 1017 GACTGTTTCCAGC----CTGCAGGAAGCGGT---TCAGGCTGTATCCAGT 1059
||.| |||| ||||.||||||.|| ||||.| |.|| .||
BL00446___yji 1033 -ACAG----CAGCTTCACTGCGGGAAGCCGTCTCTCAGAC-GGAT--GGT 1074
BSNT_02071___ 1060 GATCAAGAGCTGCTCAGCCGCGTCAAGAATATGCAAAAGGATGTAAAAGA 1109
||.|...|..|.||.|..||..|..||.|.|||||||||.|..|.|||.|
BL00446___yji 1075 GACCCGCATGTCCTGAAACGGATACAGGACATGCAAAAGCACATTAAACA 1124
BSNT_02071___ 1110 AGCTGGCGGAGCGGAGCGTGCGGCAGCTGAGATTGAAGCGTTTAT-GAAA 1158
|||.||.||.||.|||...||.||||.|||.|||||.||.|||.| |.|
BL00446___yji 1125 AGCCGGAGGGGCCGAGAAAGCCGCAGATGAAATTGAGGCATTTTTAGCA- 1173
BSNT_02071___ 1159 AAATCCGCTGTCCCGC---AGTAA----- 1179
||||| |||||
BL00446___yji 1174 -----------CCCGCAGGAGTAAAATAA 1191
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