Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04323 and BL00440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence dna-align/BSNT_04323___acsA.1.5803.seq
# -bsequence dna-align/BL00440___acsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04323___acsA-BL00440___acsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04323___acsA-BL00440___acsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04323___acsA
# 2: BL00440___acsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1759
# Identity: 1311/1759 (74.5%)
# Similarity: 1311/1759 (74.5%)
# Gaps: 80/1759 ( 4.5%)
# Score: 4796.0
#
#
#=======================================
BSNT_04323___ 1 ATGAATTTGAAAGCGTTACCAGCAATAGAGGGGGATCATAACTTAAAAAA 50
|||||.|||||||||.|.||||||..|.||||..||.|.|||||.|||.|
BL00440___acs 1 ATGAAATTGAAAGCGCTGCCAGCAGAAAAGGGAAATTACAACTTGAAAGA 50
BSNT_04323___ 51 CTATGAAGAAACGTACCGG-CATTTTGATTGGGCCGAGGCAGAGAAACAT 99
||||||.|||||.|||||| || |||||.|||...||.||.||.||.|||
BL00440___acs 51 CTATGATGAAACATACCGGACA-TTTGACTGGAAGGATGCCGAAAAGCAT 99
BSNT_04323___ 100 TTCTCTTGGCATGAGACAGGGAAACTGAATGCGGCGTATGAAGCGATTGA 149
||.||.|||||..|.||.||.|||.|.|||||.||.||||||||.||.||
BL00440___acs 100 TTTTCATGGCACAAAACGGGAAAAATCAATGCAGCTTATGAAGCTATCGA 149
BSNT_04323___ 150 CCGCCATGCCGAATC--GTTTCGAAAAAACAAAGTAGCGCTTTATTATAA 197
||||||.||.||.|| .||| .|||||||||||.||..||||.||.||
BL00440___acs 150 CCGCCACGCTGAGTCAAATTT--GAAAAACAAAGTGGCATTTTACTACAA 197
BSNT_04323___ 198 AGA-------CGCAAAAAGGGATGAAAAATACACATTTAAAGAAATGAAG 240
||| ||| ||.|||||.|||||.||.|.|||.|||||.
BL00440___acs 198 AGATCCGGTCCGC-------GAAGAAAAGTACACTTTCAGAGAGATGAAA 240
BSNT_04323___ 241 GAAGAATCAAACAGAGCCGGGAATGTGCTGAGA-CGGTATGGAAATGTGG 289
.|.|||.|.||||.|||||||||||| ||.|.| |.|.|||...||||||
BL00440___acs 241 AATGAAACCAACAAAGCCGGGAATGT-CTTAAAGCAGCATGCCGATGTGG 289
BSNT_04323___ 290 AAAAAGGGGACCGCGTTTTTATTTTTATGCCGAGATCACCCGAGCTTTAT 339
.|||.||.|||||.||.|||.||||||||||||||||.||||||||||||
BL00440___acs 290 GAAAGGGAGACCGTGTGTTTGTTTTTATGCCGAGATCGCCCGAGCTTTAT 339
BSNT_04323___ 340 TTTATTATGCTTGGCGCAATCAAAATTGGCGCCATCGCCGGGCCGCTGTT 389
||||||.|.||.|||||.||||||.|.||.||.||||.|||||||.|.||
BL00440___acs 340 TTTATTCTTCTCGGCGCCATCAAATTGGGAGCGATCGTCGGGCCGTTATT 389
BSNT_04323___ 390 CGAAGCATTTATGGAGGGAGCGGTGAAAGATCGGCTTGAAAACAGTGAGG 439
.|||||.||||||||.||.||.||.|||||..||||||.||||||.|..|
BL00440___acs 390 TGAAGCGTTTATGGAAGGTGCCGTCAAAGACAGGCTTGCAAACAGCGGAG 439
BSNT_04323___ 440 CAAAGGTTGTTGTCACAACACCTGAGCTGCTGGAGAGAATACCGGTAGAC 489
|.|||||..|.||.||.||.||.||..||||.||..|..|.||||..||.
BL00440___acs 440 CGAAGGTCATCGTGACGACGCCGGAATTGCTTGAACGGGTGCCGGCCGAT 489
BSNT_04323___ 490 AAACTGCCTCA-CTTGCAGCATGTCTTCGTAGTCGGGGGAGAGGCTGAGA 538
.||||.||..| ||||.|.|| .||.|.||||..|||||.|
BL00440___acs 490 GAACTTCCGGATCTTGAATCA----ATCATTGTCGTTGGAGAAG------ 529
BSNT_04323___ 539 GCG----GCACGAA-----TATCATCAATTATGATG---AAGCAGC-GAA 575
||| |.|.||| |.||||..|||||.|.| ||||.|| |||
BL00440___acs 530 GCGTAAAGGAAGAAGGACCTGTCATTGATTATTACGCGAAAGCGGCGGAA 579
BSNT_04323___ 576 ACAGGAAAGCACAAGA-CTGGATATCGAATGGATGGATAAAAAAGACGGC 624
.||| |||| .|| ||.||.||.||||||.|||||.|..|||||||.
BL00440___acs 580 GCAG----GCAC-TGATCTTGAGATTGAATGGGTGGATCAGGAAGACGGG 624
BSNT_04323___ 625 TTTCTGCTTCACTATACATCAGGTTCCACTGGTACGCCAAAGGGCGTGCT 674
.|.||||||||||||||.||.|||||.||.||..|||||||.||.||.||
BL00440___acs 625 ATGCTGCTTCACTATACGTCGGGTTCGACCGGCGCGCCAAAAGGGGTTCT 674
BSNT_04323___ 675 GCATGTCCATGAAGCGATGATTCAGCAATATCAAACAGGAAAGTGGGTCC 724
.||.||||||.||||.|||||.|||||.||||||||||..||.|||||.|
BL00440___acs 675 CCACGTCCATAAAGCAATGATCCAGCATTATCAAACAGCCAAATGGGTTC 724
BSNT_04323___ 725 TTGATTTAAAGGAAGAAGACATTTATTGGTGCACGGCTGATCCAGGCTGG 774
|||||.|..|.||.||.|||||.|||||||||||.||||||||.||||||
BL00440___acs 725 TTGATCTGCATGACGATGACATCTATTGGTGCACCGCTGATCCCGGCTGG 774
BSNT_04323___ 775 GTGACAGGTACGGTATACGGCATTTTTGCACCGTGGCTGAACGGAGCGAC 824
||.||.||.|||||.|||||.|||||.|..|||||||||||.|||||.||
BL00440___acs 775 GTCACCGGAACGGTTTACGGGATTTTCGGTCCGTGGCTGAATGGAGCTAC 824
BSNT_04323___ 825 AAATGTCATCGTCGGCGGACGTTTCAGCCCGGAAAGCTGGTATGGT---- 870
.|||||..||||.|||||..|.|||||.||.|| ||.|||||
BL00440___acs 825 GAATGTTGTCGTAGGCGGCAGATTCAGTCCTGA-----GGCATGGTACGA 869
BSNT_04323___ 871 -ACGATTGAACAGCTTGGCGTCAATGTCTGGTACAGCGCGCCGACCGCTT 919
|||||||||.|..|.|..||.|..||.||||||||||||||.||.||||
BL00440___acs 870 AACGATTGAAAAAATGGAAGTGACGGTATGGTACAGCGCGCCAACGGCTT 919
BSNT_04323___ 920 TTCGGATGCTGATGGGAGCGGGAGATGA-------AATGGCTGCGAAATA 962
|.||||||||||||||.||.||.||.|| ||| |||||
BL00440___acs 920 TCCGGATGCTGATGGGTGCAGGCGACGATCTTGTGAAT-------AAATA 962
BSNT_04323___ 963 TGATCTAACTTCACTCCGGCATGTGCTCAGTGTCGGTGAGCCGCTAAATC 1012
|.||||||..||..|.||||||.|..|.||.||.||.||||||.||||||
BL00440___acs 963 TAATCTAAGCTCCTTGCGGCATATTTTAAGCGTAGGGGAGCCGTTAAATC 1012
BSNT_04323___ 1013 CGGAAGTCATCAGATGGGGACATAAAGTTTTTAACAAACGAATTCATGAT 1062
|.|||||||||||.|||||.||||||||.||...|||.||.|||||||||
BL00440___acs 1013 CCGAAGTCATCAGGTGGGGGCATAAAGTCTTCGGCAACCGGATTCATGAT 1062
BSNT_04323___ 1063 ACATGGTGGATGACAGAAACGGGCAGTCAGCTTATCTGCAACTATCCTTG 1112
||.|||||||||||.|||||.||....|||||.||||||||.||.||.||
BL00440___acs 1063 ACTTGGTGGATGACTGAAACAGGATCGCAGCTCATCTGCAATTACCCGTG 1112
BSNT_04323___ 1113 CATGGATATTAAACCGGGTTCAATGGGTAAGCCGATTCCAGGAGTGGAGG 1162
||||||.|||||||||||.||||||||.|||||||||||.||.||.||||
BL00440___acs 1113 CATGGAAATTAAACCGGGATCAATGGGCAAGCCGATTCCCGGTGTAGAGG 1162
BSNT_04323___ 1163 CAGCGATCGTTGACAATCAAGGCAACGAGCTTCCGCCGTACCGAATGGGC 1212
|.||.|||||.|||||.||.||.||.||.||.||.||.|||.|||||||.
BL00440___acs 1163 CTGCAATCGTCGACAACCAGGGAAATGAACTGCCTCCTTACAGAATGGGA 1212
BSNT_04323___ 1213 AATCTCGCCATCAAAAAGGGCTGGCCTTCCATGATGCATACCATTTGGAA 1262
|||||||||||.|||||.||||||||.||.|||||||||.|.||.|||||
BL00440___acs 1213 AATCTCGCCATTAAAAAAGGCTGGCCGTCGATGATGCATTCGATCTGGAA 1262
BSNT_04323___ 1263 TAACCCTGAAAAGTATGAATCGTATTTCATGCCGGGCGGCTGGTATGTGT 1312
.||.||||||||.|||...||.|||||.||||||||||..||||||||||
BL00440___acs 1263 CAATCCTGAAAAATATAGCTCCTATTTTATGCCGGGCGATTGGTATGTGT 1312
BSNT_04323___ 1313 CTGGGGATTCTGCTTACATGGATGAAGAGGGATACTTTTGGTTCCAAGG- 1361
|.||.|||||.||.||||||||||||||.||.|||||.||||||||.||
BL00440___acs 1313 CAGGAGATTCCGCCTACATGGATGAAGACGGGTACTTCTGGTTCCAGGGA 1362
BSNT_04323___ 1362 CAGAGTTGATGACGTCATCATGACCTCCGGTGAGCGCGTCGGCCCATTTG 1411
|.|| |.||.||.|||||||||||.||.||.||.|||||||||||.||||
BL00440___acs 1363 CGGA-TCGACGATGTCATCATGACATCGGGCGAACGCGTCGGCCCGTTTG 1411
BSNT_04323___ 1412 AAGTGGAAAGCAAGCTGGTCGAACATCCGGCTATTGCAGAAGCAGGCGTA 1461
||||.||.||||||||.||.||.||||.|||..|.||.|||||||||||.
BL00440___acs 1412 AAGTCGAGAGCAAGCTTGTTGAGCATCAGGCCGTCGCTGAAGCAGGCGTC 1461
BSNT_04323___ 1462 ATCGGAAAACCTGACCCGGTGCGTGGAGAAATCATTAAAGCCTTTATTGC 1511
|||||.|||||.||.||.||.||.||.|||||.||||||||.||.||.||
BL00440___acs 1462 ATCGGCAAACCGGATCCCGTCCGGGGTGAAATTATTAAAGCGTTCATCGC 1511
BSNT_04323___ 1512 ACTCAGGGAAGGATTTGAGCCTTCTGATAAACTGAAAGAAGAGATCCGCC 1561
..|.|||||.||.|.|||.||.||.|||....|.||||||||.|||.|.|
BL00440___acs 1512 CTTGAGGGACGGTTATGAACCGTCAGATGCGTTAAAAGAAGAAATCAGGC 1561
BSNT_04323___ 1562 TATTCGTAAAGCAGGGTCTT-GCAGCCCATGCGGCTCCGCGTGAGATCGA 1610
..|||||.||.||.|| ||| ||.||.|||||.||.||..|.||.|||||
BL00440___acs 1562 AGTTCGTGAAACAAGG-CTTGGCCGCACATGCCGCGCCAAGGGAAATCGA 1610
BSNT_04323___ 1611 ATTTAAAGATAAGCTTCCGAAAACCCGAAGCGGAAAGATCATGAGGCGCG 1660
||||||||||||.||.|||||.||..|||||||||||||||||||.||||
BL00440___acs 1611 ATTTAAAGATAAACTGCCGAAGACAAGAAGCGGAAAGATCATGAGACGCG 1660
BSNT_04323___ 1661 TGCTGAAGGCATGGGAGCTTAATCTTCCTGCTGGAGATCTGTCAACAATG 1710
|.|||||.|||||||||||.||.|||||.||.||.|||||.|||.|.|||
BL00440___acs 1661 TCCTGAAAGCATGGGAGCTGAACCTTCCGGCAGGCGATCTCTCATCGATG 1710
BSNT_04323___ 1711 GAGGATTAA 1719
||.||.|.|
BL00440___acs 1711 GAAGACTGA 1719
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