Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04322 and BL00439
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence dna-align/BSNT_04322___tyrS.1.5803.seq
# -bsequence dna-align/BL00439___tyrS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04322___tyrS-BL00439___tyrS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04322___tyrS-BL00439___tyrS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04322___tyrS
# 2: BL00439___tyrS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1282
# Identity: 1010/1282 (78.8%)
# Similarity: 1010/1282 (78.8%)
# Gaps: 26/1282 ( 2.0%)
# Score: 3969.0
#
#
#=======================================
BSNT_04322___ 1 ---ATGACAAACTTACTTGAAGACTTATCCTTCCGCGGATTGATTCAGCA 47
||||||.||.|||||||.||.||.||||||.|.|||.||||||||||
BL00439___tyr 1 ATGATGACACACATACTTGATGATTTGTCCTTCAGGGGACTGATTCAGCA 50
BSNT_04322___ 48 --AATGACAGATGAAGAAGGGTTAAATAAACAGCTGAATGAAGAAAAAAT 95
|| ||.|||||||.|||.||.|...|||.|||..||.||||.|||||
BL00439___tyr 51 GCAA--ACCGATGAAGCAGGCTTGAGAGAACTGCTCGATAAAGAGAAAAT 98
BSNT_04322___ 96 CCGCTTGTACTCAGGCTTTGACCCGACAGCAGACAGCTTGCATATCGGAC 145
|.||||.|||||.||.|||||.||||||||.|||||..||||||||||.|
BL00439___tyr 99 CAGCTTATACTCCGGATTTGATCCGACAGCTGACAGTCTGCATATCGGCC 148
BSNT_04322___ 146 ACCTGCTGCCTATTTTAACACTTCGCCGTTTTCAGCTTGCGGGGCATCAT 195
||||||||||.|||||||..||||||||.||.|||||.||.||.||||.|
BL00439___tyr 149 ACCTGCTGCCGATTTTAATGCTTCGCCGCTTCCAGCTGGCCGGACATCGT 198
BSNT_04322___ 196 CCGATTGCGCTTGTGGGCGGCGCGACGGGCCTCATCGGTGATCCAAGCGG 245
|||||||||||.||.|||||.|||||||||||.|||||.|||||.|||||
BL00439___tyr 199 CCGATTGCGCTCGTAGGCGGGGCGACGGGCCTTATCGGCGATCCGAGCGG 248
BSNT_04322___ 246 AAAAAAAGCAGAGCGTACATTAAACACTGCTGACATCGTATCCGAATGGT 295
|||.|||||.|||||.||..|.||||.||..||.|||||...||||||||
BL00439___tyr 249 AAAGAAAGCGGAGCGCACGCTGAACAATGAAGAAATCGTCCGCGAATGGT 298
BSNT_04322___ 296 CCCAAAAAATCAAAAACCAGCTGTCCAGATTTCTAGATTTTGAAGCAGCA 345
|.||.|||||||||||||||||.||..|.||.||.|||||||||||.|.|
BL00439___tyr 299 CGCAGAAAATCAAAAACCAGCTTTCGCGTTTCCTTGATTTTGAAGCTGAA 348
BSNT_04322___ 346 GAAAACCCAGCTGTCATCGCGAACAACTTTGACTGGATCGGCAAAATGAA 395
||.|||||.||..||||.||||||||||.|||||||||||||||||||||
BL00439___tyr 349 GAGAACCCGGCGATCATGGCGAACAACTATGACTGGATCGGCAAAATGAA 398
BSNT_04322___ 396 TGTGATCGATTTCCTTCGTGACGTTGGTAAAAATTTCGGCATCAATTACA 445
.||.||.||||||||.||.||.||.||.|||||.|||||.||||||||||
BL00439___tyr 399 CGTCATTGATTTCCTGCGCGATGTCGGCAAAAACTTCGGAATCAATTACA 448
BSNT_04322___ 446 TGCTGGCAAAAGATACGGTCAGCTCAAGAATTGAATCAGGCATCTCGTAC 495
||||.||.||.||||||||.|||||.|||||.||..|||||||.||.||.
BL00439___tyr 449 TGCTTGCCAAGGATACGGTAAGCTCCAGAATCGAGACAGGCATATCTTAT 498
BSNT_04322___ 496 ACTGAATTCAGCTACATGATTCTTCAATCTTATGATTTCTTAAATCTTTA 545
||||||||||||||||||||.||.||.|||...||||||||.|||.|.||
BL00439___tyr 499 ACTGAATTCAGCTACATGATCCTGCAGTCTCTCGATTTCTTGAATTTGTA 548
BSNT_04322___ 546 CAGAGACAAAAACTGTAAACTGCAAATCGGCGGAAGCGATCAGTGGGGCA 595
||||.||.|..|.||.||.||.||.||||||||||||||.||||||||||
BL00439___tyr 549 CAGAAACCAGGAATGCAAGCTTCAGATCGGCGGAAGCGACCAGTGGGGCA 598
BSNT_04322___ 596 ATATCACAGCGGGTCTTGAACTGATCAGAAAATCAGAAGAAGAAGGAGCA 645
|.||||||.|.|||||.|||||.|||.|.|||||.|||| |||| .|||
BL00439___tyr 599 ACATCACATCAGGTCTCGAACTCATCCGCAAATCCGAAG-AGAA--TGCA 645
BSNT_04322___ 646 AAAGCGTTCGGCCTAACGATTCCGCTTGTCACAAAAGCAGACGGCACGAA 695
|||||.|||||..|.||||||||||||||.||||||||||||||||||||
BL00439___tyr 646 AAAGCTTTCGGATTGACGATTCCGCTTGTGACAAAAGCAGACGGCACGAA 695
BSNT_04322___ 696 GTTCGGAAAAACGGAAGGCGGCGCGATCTGGCTTGATAAAGAAAAAACAT 745
||||||||||||||||||||||||||||||||||||||||||.|||||.|
BL00439___tyr 696 GTTCGGAAAAACGGAAGGCGGCGCGATCTGGCTTGATAAAGAGAAAACGT 745
BSNT_04322___ 746 CGCCATATGAATTCTATCAATTCTGGATCAACACAGACGACCGTGACGTT 795
||.|.|||||.||.|||||.|||||||||||.||.||||||.|.||.||.
BL00439___tyr 746 CGGCGTATGAGTTTTATCAGTTCTGGATCAATACCGACGACAGGGATGTC 795
BSNT_04322___ 796 GTCAAATACTTGAAATACTTTACGTTCCTTTCAAAAGAGGAAATTGAAGC 845
||.||||||||.||||||||.||.|||.|.||||||||.||||||||||
BL00439___tyr 796 GTGAAATACTTAAAATACTTCACTTTCTTATCAAAAGAAGAAATTGAAG- 844
BSNT_04322___ 846 AT-ACGCTGAAAAAACAGAAACGGCGCCAGAAAAACGTGAAGCGCAAAAA 894
|| .|||||||||||||||.||||||||.||||||||.|||||||||||.
BL00439___tyr 845 ATCTCGCTGAAAAAACAGAGACGGCGCCTGAAAAACGCGAAGCGCAAAAG 894
BSNT_04322___ 895 CGCCTGGCAGAAGAAGTGACATCACTTGTTCACGGACGCGAGGCGCTGGA 944
|||||.||.|||||||||||....|||||.|||||.||.||.|||.|.||
BL00439___tyr 895 CGCCTCGCCGAAGAAGTGACCGTTCTTGTACACGGCCGTGAAGCGTTTGA 944
BSNT_04322___ 945 GCAAGCCATCAACATCTCCCAAGCGCTGTTCAGCGGCAATATTAAAGAGC 994
|||.|||.||||||||||..||||.|||||||||||..||||.|||.|..
BL00439___tyr 945 GCAGGCCGTCAACATCTCAAAAGCACTGTTCAGCGGAGATATCAAACAAT 994
BSNT_04322___ 995 TTTCTGCTCAAGACGTAAAAGTAGGCTTTAAAGATGTTCCTTCTATGGAA 1044
|..|.|||.||||.||||||||.||||||||||..||||||||..||||.
BL00439___tyr 995 TGACAGCTGAAGAAGTAAAAGTCGGCTTTAAAGGGGTTCCTTCCCTGGAG 1044
BSNT_04322___ 1045 GTTGACAGCACCCAAGAGCTTTCACTTGTAGATGTGTTGGTGCAATCTAA 1094
||.||.|...|..|.||.|||.|.|||||.||..|..|.||.|||||.||
BL00439___tyr 1045 GTCGAGAAAGCGGATGAACTTCCTCTTGTTGAAATACTCGTCCAATCAAA 1094
BSNT_04322___ 1095 ATTATCTCCTTCTAAACGCCAAGCGCGTGAAGACATCCAAAACGGAGCTG 1144
..|.|||||.||||||||.||.|||||.|||||.|||...||.||.||.|
BL00439___tyr 1095 GCTGTCTCCGTCTAAACGGCAGGCGCGCGAAGATATCACGAATGGCGCGG 1144
BSNT_04322___ 1145 TTTACATTAACGGCGAACGCCAAACAGAAATAAATTAT-----AC--CCT 1187
|.|||.||||||||||.||||..||.|| |.| || |||
BL00439___tyr 1145 TATACGTTAACGGCGAGCGCCGCACCGA-------TGTTGCGGACGTCCT 1187
BSNT_04322___ 1188 ATCGGCTGAAGACCGCATCGAAAATCAATTTACTGTTCTGCGCCGCGGGA 1237
..|.||.||.||||||||||||...||.|||||.||..|.||||||||.|
BL00439___tyr 1188 CACCGCCGACGACCGCATCGAAGGACAGTTTACCGTCATTCGCCGCGGTA 1237
BSNT_04322___ 1238 AGAAAAAATACTTCCTTGTGACGTATAAATAA 1269
|.||.|||||||||||..||||.|||||.|||
BL00439___tyr 1238 AAAAGAAATACTTCCTGCTGACTTATAAGTAA 1269
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