Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04314 and BL00434
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence dna-align/BSNT_04314___yttP.1.5803.seq
# -bsequence dna-align/BL00434___yttP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04314___yttP-BL00434___yttP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04314___yttP-BL00434___yttP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04314___yttP
# 2: BL00434___yttP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 671
# Identity: 465/671 (69.3%)
# Similarity: 465/671 (69.3%)
# Gaps: 79/671 (11.8%)
# Score: 1554.0
#
#
#=======================================
BSNT_04314___ 1 -----ATGAAA-------GTAAGCACCAAAGACAAAATTATTGAATCTGC 38
||.||| ..||.|||.||.||||..||.||.||||||||
BL00434___ytt 1 ATGGGATCAAACGCTACTCCAACCACGAAGGACAGGATCATCGAATCTGC 50
BSNT_04314___ 39 TGTCATGCTTTTTAACCAAAAAGGATTTTCTGGCACGTCTGTCCGTGAAA 88
.||....||.||.|||||||||||.|||||.||.||.||.|||||.||||
BL00434___ytt 51 CGTGGAACTGTTCAACCAAAAAGGTTTTTCAGGAACATCAGTCCGCGAAA 100
BSNT_04314___ 89 TCG-CAAAGTCAGCTGATGTAAATGTTGCGCACATCTCCTACTATTTTAA 137
|.| |..|| ||||..||||.|||||.||.|||||||||||.||||||||
BL00434___ytt 101 TTGCCCGAG-CAGCCAATGTCAATGTCGCCCACATCTCCTATTATTTTAA 149
BSNT_04314___ 138 AGGCAAAGGAGGCTTGATGGAAAACTTAGTTTCAGAGTTTTACGAGGGCT 187
.||.|||||.||.||.|||||..|.|||||.||....|||||.||.||||
BL00434___ytt 150 TGGAAAAGGCGGGTTAATGGAGCATTTAGTATCCCGTTTTTATGAAGGCT 199
BSNT_04314___ 188 ACAGCAAAACGCTTGAAACAGCGGC-----AAGCAATATCTCTTCTCAAA 232
|....|.||..||||||| || ||| |.|| |||| |
BL00434___ytt 200 ATTTAAGAATCCTTGAAA-AG-GGCCATGAACGC-------CTTC----A 236
BSNT_04314___ 233 GCACGCAGG---AACAG-----CTTCTTCAATTGGTTTTCGATATTTTAT 274
|.|.||||| |||.| |||||||||||||||||.||||||.|||
BL00434___ytt 237 GGATGCAGGTGCAACGGATTGCCTTCTTCAATTGGTTTTTGATATTCTAT 286
BSNT_04314___ 275 CCTATCAGCATAATCATCGTCAATTAACTCGTTTTGTCTACCGGGAAGTC 324
|.|||||||||.|.|||||||||||||||||.||||||||.||.||||||
BL00434___ytt 287 CGTATCAGCATGAACATCGTCAATTAACTCGGTTTGTCTATCGCGAAGTC 336
BSNT_04314___ 325 ACAATTGACTCCACA-TTAATCAGGGAAATTATGTCGACATATCTAATGA 373
||.|||||.|||||| |.|||| |.|||.|.||||||||||||.|||.||
BL00434___ytt 337 ACGATTGATTCCACACTGAATC-GTGAAGTGATGTCGACATATTTAACGA 385
BSNT_04314___ 374 AGGAAAAGTATATCTTCCAGCTGATCATTGA-----GGAAGGAGAAAAAC 418
|.||||||||.||..||||.||||||||||| |.||.|||.|.|||
BL00434___ytt 386 AAGAAAAGTACATTCTCCATCTGATCATTGAAAAGGGAAATGAGGACAAC 435
BSNT_04314___ 419 AGCGTGAATATTTAACG-CTGCCGCTGCCTCATTTTATTCTCCAATTAAA 467
|||| |||..|| .|.||.||..|.||||||||..|.||..|.||
BL00434___ytt 436 -----GAAT-TTTCCCGTTTTCCCCTTTCCCATTTTATGATTCAGCTGAA 479
BSNT_04314___ 468 ATCTCTCTTGATGATGCCCTATCTCCAGCCTCAATATATTTCAGAAGTAC 517
.||.||.||.||||||||.|||||.|||||||||||||||||||||||.|
BL00434___ytt 480 GTCGCTTTTAATGATGCCTTATCTGCAGCCTCAATATATTTCAGAAGTGC 529
BSNT_04314___ 518 TCTACATGCAGCCGCACGAGCCGTATTTTTATAAAATGTATTTTGAAGAA 567
|.||..|.|||||||||||||||||.||||||.|...|||||...|.|||
BL00434___ytt 530 TTTATGTACAGCCGCACGAGCCGTACTTTTATCAGGCGTATTACAAGGAA 579
BSNT_04314___ 568 ATCAAGATTTGG---ATCAGAAGCGTCTTCCGGACAGGAGA-CGT-GGC- 611
.||||.|..||| .||| ||||...|.||| |||| ||| |||
BL00434___ytt 580 GTCAAAACATGGCTTCTCA-----GTCTGTTGTACA-GAGAGCGTCGGCA 623
BSNT_04314___ 612 -GCTCACC-------AACTAG 624
|| |.|| ||
BL00434___ytt 624 AGC-CGCCGTTATTTAA---- 639
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