Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04314 and BL00434

See Amino acid alignment / Visit BSNT_04314 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:27
# Commandline: needle
#    -asequence dna-align/BSNT_04314___yttP.1.5803.seq
#    -bsequence dna-align/BL00434___yttP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04314___yttP-BL00434___yttP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04314___yttP-BL00434___yttP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04314___yttP
# 2: BL00434___yttP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 671
# Identity:     465/671 (69.3%)
# Similarity:   465/671 (69.3%)
# Gaps:          79/671 (11.8%)
# Score: 1554.0
# 
#
#=======================================

BSNT_04314___      1 -----ATGAAA-------GTAAGCACCAAAGACAAAATTATTGAATCTGC     38
                          ||.|||       ..||.|||.||.||||..||.||.||||||||
BL00434___ytt      1 ATGGGATCAAACGCTACTCCAACCACGAAGGACAGGATCATCGAATCTGC     50

BSNT_04314___     39 TGTCATGCTTTTTAACCAAAAAGGATTTTCTGGCACGTCTGTCCGTGAAA     88
                     .||....||.||.|||||||||||.|||||.||.||.||.|||||.||||
BL00434___ytt     51 CGTGGAACTGTTCAACCAAAAAGGTTTTTCAGGAACATCAGTCCGCGAAA    100

BSNT_04314___     89 TCG-CAAAGTCAGCTGATGTAAATGTTGCGCACATCTCCTACTATTTTAA    137
                     |.| |..|| ||||..||||.|||||.||.|||||||||||.||||||||
BL00434___ytt    101 TTGCCCGAG-CAGCCAATGTCAATGTCGCCCACATCTCCTATTATTTTAA    149

BSNT_04314___    138 AGGCAAAGGAGGCTTGATGGAAAACTTAGTTTCAGAGTTTTACGAGGGCT    187
                     .||.|||||.||.||.|||||..|.|||||.||....|||||.||.||||
BL00434___ytt    150 TGGAAAAGGCGGGTTAATGGAGCATTTAGTATCCCGTTTTTATGAAGGCT    199

BSNT_04314___    188 ACAGCAAAACGCTTGAAACAGCGGC-----AAGCAATATCTCTTCTCAAA    232
                     |....|.||..||||||| || |||     |.||       ||||    |
BL00434___ytt    200 ATTTAAGAATCCTTGAAA-AG-GGCCATGAACGC-------CTTC----A    236

BSNT_04314___    233 GCACGCAGG---AACAG-----CTTCTTCAATTGGTTTTCGATATTTTAT    274
                     |.|.|||||   |||.|     |||||||||||||||||.||||||.|||
BL00434___ytt    237 GGATGCAGGTGCAACGGATTGCCTTCTTCAATTGGTTTTTGATATTCTAT    286

BSNT_04314___    275 CCTATCAGCATAATCATCGTCAATTAACTCGTTTTGTCTACCGGGAAGTC    324
                     |.|||||||||.|.|||||||||||||||||.||||||||.||.||||||
BL00434___ytt    287 CGTATCAGCATGAACATCGTCAATTAACTCGGTTTGTCTATCGCGAAGTC    336

BSNT_04314___    325 ACAATTGACTCCACA-TTAATCAGGGAAATTATGTCGACATATCTAATGA    373
                     ||.|||||.|||||| |.|||| |.|||.|.||||||||||||.|||.||
BL00434___ytt    337 ACGATTGATTCCACACTGAATC-GTGAAGTGATGTCGACATATTTAACGA    385

BSNT_04314___    374 AGGAAAAGTATATCTTCCAGCTGATCATTGA-----GGAAGGAGAAAAAC    418
                     |.||||||||.||..||||.|||||||||||     |.||.|||.|.|||
BL00434___ytt    386 AAGAAAAGTACATTCTCCATCTGATCATTGAAAAGGGAAATGAGGACAAC    435

BSNT_04314___    419 AGCGTGAATATTTAACG-CTGCCGCTGCCTCATTTTATTCTCCAATTAAA    467
                          |||| |||..|| .|.||.||..|.||||||||..|.||..|.||
BL00434___ytt    436 -----GAAT-TTTCCCGTTTTCCCCTTTCCCATTTTATGATTCAGCTGAA    479

BSNT_04314___    468 ATCTCTCTTGATGATGCCCTATCTCCAGCCTCAATATATTTCAGAAGTAC    517
                     .||.||.||.||||||||.|||||.|||||||||||||||||||||||.|
BL00434___ytt    480 GTCGCTTTTAATGATGCCTTATCTGCAGCCTCAATATATTTCAGAAGTGC    529

BSNT_04314___    518 TCTACATGCAGCCGCACGAGCCGTATTTTTATAAAATGTATTTTGAAGAA    567
                     |.||..|.|||||||||||||||||.||||||.|...|||||...|.|||
BL00434___ytt    530 TTTATGTACAGCCGCACGAGCCGTACTTTTATCAGGCGTATTACAAGGAA    579

BSNT_04314___    568 ATCAAGATTTGG---ATCAGAAGCGTCTTCCGGACAGGAGA-CGT-GGC-    611
                     .||||.|..|||   .|||     ||||...|.||| |||| ||| ||| 
BL00434___ytt    580 GTCAAAACATGGCTTCTCA-----GTCTGTTGTACA-GAGAGCGTCGGCA    623

BSNT_04314___    612 -GCTCACC-------AACTAG    624
                      || |.||       ||    
BL00434___ytt    624 AGC-CGCCGTTATTTAA----    639


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