Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04307 and BL00431
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence dna-align/BSNT_04307.1.5803.seq
# -bsequence dna-align/BL00431___thiI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04307-BL00431___thiI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04307-BL00431___thiI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04307
# 2: BL00431___thiI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1254
# Identity: 887/1254 (70.7%)
# Similarity: 887/1254 (70.7%)
# Gaps: 96/1254 ( 7.7%)
# Score: 2999.0
#
#
#=======================================
BSNT_04307 1 ATGAATTACGATCATATATTAATTCGTTTTGGGGAAATTTCGACCAAAGG 50
||||||.|.||..|.||.|||||..|.|||||.||||||||.||.|||||
BL00431___thi 1 ATGAATGAGGACTACATTTTAATCAGATTTGGCGAAATTTCAACAAAAGG 50
BSNT_04307 51 CAAAAACAGAAAAAGCTTTATT---GAGCGCTTAAAACAAAACATCAGAC 97
.||.||.|| |||||||| || ||.|||.|.|||..|||.||||.|.
BL00431___thi 51 AAAGAATAG--AAAGCTTT-TTGTCGATCGCCTGAAAAGAAATATCAAAA 97
BSNT_04307 98 TCGTTTTGAAAGACTATCCGAA-------TTTAAAATACTTTTCCAACA- 139
|.||.|||...|| |.||||.| ||...||| |||||
BL00431___thi 98 TGGTCTTGCGCGA-TTTCCGCAACGTCCGTTATGAAT-------CAACAC 139
BSNT_04307 140 GGGATCGTATGACGATTACATTAAATGGAGAGGATCCTGAGGCTCTTTTT 189
|.||..|.|||||..|...||||||.|||||.||..||||.|||.|..|.
BL00431___thi 140 GCGACAGAATGACTCTCGTATTAAACGGAGAAGACGCTGAAGCTGTAATG 189
BSNT_04307 190 CCTCATTTAAAGCAAGTGTTTGGGATTCAAAGCTTCAGCCTGGCAATTAA 239
.|||.|.|.||.||.||.||.||.||.|||...|||||.||.||..|.||
BL00431___thi 190 GCTCGTCTGAAACACGTTTTCGGCATCCAATCGTTCAGTCTTGCCGTGAA 239
BSNT_04307 240 GTG--TGACAGCCGCCTTGATGATATTAAGGCAACCGCACTAAAG----- 282
||| .|||| |||.| ||.|| |||.|||||
BL00431___thi 240 GTGCCGGACA-----------GATCT---GGAAA--GCATTAAAGAGACG 273
BSNT_04307 283 ------GCTATC----AAAGATCAGTATAAACCAGGTGATACGTTTAAAG 322
||| || .||||.||.||.||.||.||.|||||.|||||||
BL00431___thi 274 GCGCTCGCT-TCTGTTCAAGAACAATACAAGCCCGGGGATACCTTTAAAG 322
BSNT_04307 323 TCGCGACAAAGAGAGCGTATAAGCAATTTGAATTAGATACAAACCAAATG 372
|..||||.||.||.||.||||||||.|||||||||.|||||||..|.|||
BL00431___thi 323 TATCGACGAAAAGGGCTTATAAGCAGTTTGAATTAAATACAAATGAGATG 372
BSNT_04307 373 AACGCTGAAATCGGCGGCCATATTTTGCGAAATACAGAAGGAT-TGACGG 421
||.||.||.|||||.||.||.||||||||.||.||.| |.||| |.||.|
BL00431___thi 373 AATGCCGAGATCGGAGGACACATTTTGCGCAACACCG-ACGATCTTACCG 421
BSNT_04307 422 TCGATGTTCGCAACCCAGACATCCCGCTCAGAATCGAAATCAGGGAAGAA 471
|.||.||.|.|..|||.|||||||...|..|.||||||||..|||||||.
BL00431___thi 422 TTGACGTCCACTCCCCGGACATCCATTTGCGTATCGAAATTCGGGAAGAT 471
BSNT_04307 472 GCAACATTTTTGACAATTCGTGATGAAAAAGGTGCAGGCGGGTTGCCAGT 521
||.||.|.|||||||.|.||.||||||||||||||.|||||..||||.||
BL00431___thi 472 GCCACGTATTTGACATTCCGGGATGAAAAAGGTGCGGGCGGACTGCCGGT 521
BSNT_04307 522 TGGTTCAGC--AGGAAAAGCGATGCTGATGCTTTCTGGCGGTTTTGACAG 569
.|| .||| |||||||||||||||.|||.|.||.|||||..|.|||||
BL00431___thi 522 CGG--AAGCGGAGGAAAAGCGATGCTTATGATATCCGGCGGAATCGACAG 569
BSNT_04307 570 CCCTGTTGCCGGTTTTTATGCGATGAAACG-GGGCTTGTCGGTAGAAGCT 618
||||||||||||.||.|||||.|||||.|| ||.|||| .|.|.|||||.
BL00431___thi 570 CCCTGTTGCCGGGTTCTATGCCATGAAGCGCGGACTTG-AGATCGAAGCC 618
BSNT_04307 619 GTTCATTTCTTCAGCCCGCCATACACAAGCGAGCGCGCAAAGCAAAAGGT 668
|||||.||.||||||||||||||.|||||||||||.||.||||||||.||
BL00431___thi 619 GTTCACTTTTTCAGCCCGCCATATACAAGCGAGCGGGCCAAGCAAAAAGT 668
BSNT_04307 669 AATGGATCTGGCGAAATGTCTGTCCCG-TTTTGGGGGAAGCATGACACTT 717
.||.|||||..|.||..|.|| |.|.| ||||||.|||..|||.|..|||
BL00431___thi 669 GATCGATCTTACTAAGCGGCT-TACGGCTTTTGGCGGAGACATCAAGCTT 717
BSNT_04307 718 CATATTGTTCCATTTACAAAAACGCAAGAGCTCATTCAAAAACAAATTCC 767
|||||.|||||.|||||||||||.|||||||||||||||||.||.|||||
BL00431___thi 718 CATATCGTTCCGTTTACAAAAACTCAAGAGCTCATTCAAAAGCAGATTCC 767
BSNT_04307 768 TGAAAATTACACAATGACGGCAACCCGCCGCCTCATGCTTCAGATCGCCG 817
.||.||.||..|.||||||||.|||.|..|.||.|||||.||||||||||
BL00431___thi 768 CGAGAACTATTCCATGACGGCGACCAGAAGGCTGATGCTCCAGATCGCCG 817
BSNT_04307 818 ACAGAATCAGAGAA----AAGAGAAACGGGCTTGCCGTTATTACGGGAGA 863
|||.|.|..|.||| | .||||.||||||..|..||||.||.||
BL00431___thi 818 ACAAACTGCGCGAACGCCA----TAACGCGCTTGCGATCTTTACAGGGGA 863
BSNT_04307 864 AAGCCTCGGTCAGGTAGCGAGCCAAACGCTTGAAAGCATGTATGCAATTA 913
|||||||||.|||||.||.|||||.||||||||||||||||||||.||.|
BL00431___thi 864 AAGCCTCGGCCAGGTGGCAAGCCAGACGCTTGAAAGCATGTATGCCATCA 913
BSNT_04307 914 ATGCGGTGACGTCAACACCGATTTTGCGTCCGCTAATCGCCATGGACAAA 963
|.|||||.|||...||.|||.|||||||.||..||||||.||||||.||.
BL00431___thi 914 ACGCGGTCACGAGCACGCCGGTTTTGCGCCCTTTAATCGGCATGGATAAG 963
BSNT_04307 964 ACAGAAATCATCGAAAAATCACGGGAAATTGGCACATATGAGACAAGCAT 1013
||.|||||||||||||||.|...||||||.|..||.||.||.|..|||||
BL00431___thi 964 ACGGAAATCATCGAAAAAGCGAAGGAAATCGATACGTACGATATCAGCAT 1013
BSNT_04307 1014 TCAGCCGTTTGAAGACTGCTGCACGATCTTTACACC----GCCAAGCCCG 1059
.|..||||..|||||||||||||||||||||||.|| || .|||
BL00431___thi 1014 ACGTCCGTACGAAGACTGCTGCACGATCTTTACGCCTTCTGC----GCCG 1059
BSNT_04307 1060 AAAACACGCCCTAAAAAAGAGAAAATTGAACACTTTGAAAGCTTTGTTGA 1109
|||||.||.||.||||||||||||||.||||||||||||||||.....||
BL00431___thi 1060 AAAACGCGTCCGAAAAAAGAGAAAATCGAACACTTTGAAAGCTACACAGA 1109
BSNT_04307 1110 TTTCGAGCCGTATATTCAA-GAAGCGGTAGATAACATTGAGACAATGACC 1158
||||||.|||..|| |||| |||||.||.||.||||..||.||.||
BL00431___thi 1110 TTTCGAACCGCTTA-TCAACGAAGCTGTGGAAAACACGGAAACGAT---- 1154
BSNT_04307 1159 CTGTAT--AGCGAACAA----GAAGCTAACGATAAATTCGCTGAACTCTT 1202
|||.| ||| |.||| |||.|.||.|||.||||.||.||..|.||
BL00431___thi 1155 -TGTTTTGAGC-AGCAAAGCGGAAACGAAAGATCAATTTGCGGATTTTTT 1202
BSNT_04307 1203 TTAA 1206
.|||
BL00431___thi 1203 CTAA 1206
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