Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04295 and BL00421

See Amino acid alignment / Visit BSNT_04295 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence dna-align/BSNT_04295___tpx.1.5803.seq
#    -bsequence dna-align/BL00421___tpx.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04295___tpx-BL00421___tpx.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04295___tpx-BL00421___tpx.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04295___tpx
# 2: BL00421___tpx
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity:     386/511 (75.5%)
# Similarity:   386/511 (75.5%)
# Gaps:          14/511 ( 2.7%)
# Score: 1412.5
# 
#
#=======================================

BSNT_04295___      1 ATGGCTGAAATTACATTCAAAGGCGGTCCGGTTACACTTGTCGGACAAGA     50
                     ||||||..|||||||||.||.||....|||||.|||||.||.||...|||
BL00421___tpx      1 ATGGCTTCAATTACATTTAAGGGAAACCCGGTGACACTGGTGGGTTCAGA     50

BSNT_04295___     51 AGTGAAGGTAGGAGATCAAGCTCCTGATTTCACAGTGCTGACTAACAGCC    100
                     ||||||.||.|||||.||.||.|||||||||||.||..||.|.||....|
BL00421___tpx     51 AGTGAAAGTCGGAGACCAGGCGCCTGATTTCACGGTTTTGTCCAATTCGC    100

BSNT_04295___    101 TTGAAGAA---AAATCGTTAGCTGACATGAAAGGAAA---GGTAACGATT    144
                     ||||.|||   |.| |.|.||  |||||.|||||.||   ||   ||.||
BL00421___tpx    101 TTGAGGAAGTCACA-CTTCAG--GACATCAAAGGCAAACCGG---CGGTT    144

BSNT_04295___    145 ATTTCTGTTATCCCTTCAATTGATACAGGTGTTTGTGATGCACAAACACG    194
                     |||||.||.||.||.||.||.|||||||||||||||||.|||||.||.||
BL00421___tpx    145 ATTTCGGTGATTCCGTCTATCGATACAGGTGTTTGTGACGCACAGACCCG    194

BSNT_04295___    195 CCGTTTTAACGAAGAAGCTGCAAAGCTTGGAGATGTCAACGTCTACACAA    244
                     |||.||||||||||||||.|||...||.||....||.||.||.||.||.|
BL00421___tpx    195 CCGCTTTAACGAAGAAGCCGCAGGCCTCGGTTCGGTGAAAGTGTATACGA    244

BSNT_04295___    245 TCAGTGCAGACCTTCCATTCGCGCAAGCGCGCTGGTGCGGCGCTAACGGA    294
                     ||||.||.|||||.||.||.||.||.||||||||||||||.||.||||||
BL00421___tpx    245 TCAGCGCTGACCTGCCGTTTGCACAGGCGCGCTGGTGCGGAGCAAACGGA    294

BSNT_04295___    295 ATTGACAAAGTGGAAACACTGTCTGACCACAGAGATATGTCATTTGGCGA    344
                     |||||.||.|||||||||.||||.||.|||||.||.|||||.|||||.||
BL00421___tpx    295 ATTGAAAATGTGGAAACATTGTCAGATCACAGGGAGATGTCTTTTGGGGA    344

BSNT_04295___    345 AGCGTTCGGTGTGTATATTAAAGAACTTCGTCTGCTTGCGCGTTCCGTAT    394
                     |||.|||||.||.||.|||||||||.|..|..|||||||.||..||||||
BL00421___tpx    345 AGCATTCGGGGTTTACATTAAAGAATTGAGATTGCTTGCCCGCGCCGTAT    394

BSNT_04295___    395 TTGTCCTTGATGAGAATGGAAAAGTCGTTTACGCTGAATATGTAAGCGAA    444
                     ||||..|.|||||.||.||||||||.||.|||.|||||||.||.||||||
BL00421___tpx    395 TTGTTTTAGATGAAAACGGAAAAGTTGTCTACACTGAATACGTCAGCGAA    444

BSNT_04295___    445 GCAACAAACCACCCGAACTATGA-AAAGCCAATTGAGGCTGCTAAGGCAT    493
                     ||.||||||||.|||.||||.|| |||||| ||.||.|||||.||..||.
BL00421___tpx    445 GCGACAAACCATCCGGACTACGACAAAGCC-ATCGAAGCTGCCAAATCAC    493

BSNT_04295___    494 TAGTGAAGTAA    504
                     |.||.||||||
BL00421___tpx    494 TCGTTAAGTAA    504


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