Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04291 and BL00419
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_04291___ackA.1.5803.seq
# -bsequence dna-align/BL00419___ackA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04291___ackA-BL00419___ackA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04291___ackA-BL00419___ackA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04291___ackA
# 2: BL00419___ackA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1308
# Identity: 977/1308 (74.7%)
# Similarity: 977/1308 (74.7%)
# Gaps: 132/1308 (10.1%)
# Score: 3982.0
#
#
#=======================================
BSNT_04291___ 1 ATGTTTAAATGGAAAAGTCAGATATTTTTCGGAGAAGATGTTGATATTCA 50
BL00419___ack 0 -------------------------------------------------- 0
BSNT_04291___ 51 CCGGGAAAAAAGTACGAAAAACGAAGTTGTTGATACAGAGTATAAAGGAG 100
BL00419___ack 0 -------------------------------------------------- 0
BSNT_04291___ 101 CGTCAATCATGTCCAAAATTATTGCAATTAACGCAGGAAGCTCGTCTTTG 150
||||||||||||||||||||.||.||.||||||||.||..||
BL00419___ack 1 --------ATGTCCAAAATTATTGCAATCAATGCTGGAAGCTCATCACTG 42
BSNT_04291___ 151 AAATTTCAGCTTTTCGAAATGCCTTCA--GAAACCGTTTTAACGAAGGGT 198
||||||||.||.||||||||||| || ||||..||.|||||.||.||.
BL00419___ack 43 AAATTTCAACTGTTCGAAATGCC--CAGCGAAAAAGTATTAACAAAAGGC 90
BSNT_04291___ 199 TTAGTTGAACGAATCGGTATCGCCG----ACAGCGTATTCACAATTTCTG 244
.|.|||||.|||||||| ||.| ||.||.|.|||||.|||||.|
BL00419___ack 91 CTTGTTGAGCGAATCGG----GCTGGATAACGGCATCTTCACGATTTCCG 136
BSNT_04291___ 245 TGAACGGCGAAAAAAATACAGAAGTAACTGATATTCCGGATCATGCGGTA 294
|.||||.|||||||||.||.|||..|||.|||||||||||||||.|.|||
BL00419___ack 137 TCAACGACGAAAAAAAGACTGAAACAACAGATATTCCGGATCATTCCGTA 186
BSNT_04291___ 295 GCTGTTAAAATGCTGCTGAATAAGTTAACGGAATTCGGCATTATTAAAGA 344
|||||.||||||||||||.||||..|.||..|||||||||||||.||.||
BL00419___ack 187 GCTGTAAAAATGCTGCTGGATAAACTGACAAAATTCGGCATTATCAAGGA 236
BSNT_04291___ 345 CTTGAATGAAATTGACGGAATTGGCCATCGTGTCGTTCACGGCGGAGAAA 394
.||.||||||||.||||||||.||.||.||.|||||.||||||||.||||
BL00419___ack 237 TTTAAATGAAATCGACGGAATCGGTCACCGCGTCGTACACGGCGGCGAAA 286
BSNT_04291___ 395 AATTCAGCGATTCTGTTTTATTAACGGATGAAA----CCATTAAGGAAAT 440
|.||||||||.||.||||||||.|||||||||| |||| ||.||
BL00419___ack 287 AGTTCAGCGACTCCGTTTTATTGACGGATGAAATGATCCAT----GAGAT 332
BSNT_04291___ 441 CGAAGATATTTCTGAATTGGCACCGCTTCACAATCCGGCAAATATCGTTG 490
||||||.|||||.||..|.|||||||||||.||.|||||.|||||.||.|
BL00419___ack 333 CGAAGAGATTTCAGAGCTTGCACCGCTTCATAACCCGGCCAATATTGTCG 382
BSNT_04291___ 491 GAATTAAAGCGTTCAAAGAAGTGCTTCCAAATGTTCCTGCGGTAGCTGTA 540
|||||||||||||.||||||||.|||||.|||||||||||.||.||.||.
BL00419___ack 383 GAATTAAAGCGTTTAAAGAAGTTCTTCCGAATGTTCCTGCCGTGGCCGTT 432
BSNT_04291___ 541 TTTGATACGGCATTCCACCAAACAATGCCTGAGCAGTCTTACCTGTACAG 590
|||||||||||||||||.|||||.|||||.||.||.|||||.||||||||
BL00419___ack 433 TTTGATACGGCATTCCATCAAACGATGCCGGAACAATCTTATCTGTACAG 482
BSNT_04291___ 591 CCTGCCGTATGAATACTATGAAAAATTCGGCATCCGTAAATACGGCTTCC 640
.|||||.||||||||.|||||.|||||||||||||||||||||||.||||
BL00419___ack 483 TCTGCCATATGAATATTATGAGAAATTCGGCATCCGTAAATACGGTTTCC 532
BSNT_04291___ 641 ACGGCACTTCACATAAATATGTAACTGAGCGTGCGGCAGAGCTTCTCGGC 690
|.||.||.||.|||||||||||.|||||.||.|||||||||||.||.|||
BL00419___ack 533 ATGGTACATCTCATAAATATGTGACTGAACGCGCGGCAGAGCTGCTTGGC 582
BSNT_04291___ 691 CGTCCG-TTAAAAGACTTGCGCCTGATTTCCTGCCACCTTGGAAACGGAG 739
|||||| ||.||..|||| |||||||||||||||||||||||||||||||
BL00419___ack 583 CGTCCGATTGAAGAACTT-CGCCTGATTTCCTGCCACCTTGGAAACGGAG 631
BSNT_04291___ 740 CAAGTATTGCCGCTGTTGAAGGCGGAAAATCTATTGACACATCCATGGGC 789
|.||.||.||.||||||||||||||.|||||.||.||.|||||.||||||
BL00419___ack 632 CGAGCATCGCAGCTGTTGAAGGCGGCAAATCAATCGATACATCAATGGGC 681
BSNT_04291___ 790 TTTACGCCGCTTGCCGGTGTAGCAATGGGCACACGCTCTGGAAACATCGA 839
||.||.||||||||.||||||||.|||||.||.||.||.||.||||||||
BL00419___ack 682 TTCACACCGCTTGCAGGTGTAGCGATGGGTACGCGTTCAGGTAACATCGA 731
BSNT_04291___ 840 CCCTGCCCTGATCCCATACATCATGGAGAAAACAGGCCAAACGGCTGACG 889
.|||||.||.|||||.|.|||.|||||.|||||.||.|||||.||.||||
BL00419___ack 732 TCCTGCGCTTATCCCGTTCATTATGGAAAAAACGGGTCAAACAGCCGACG 781
BSNT_04291___ 890 AAGTACTGAATACATTAAACAAAAAAAGCGGACTGCTCGGCATTTCCGGT 939
||||.|||||.||..|.||.||.||.|||||.||..|.||.|||||.||.
BL00419___ack 782 AAGTCCTGAACACGCTCAATAAGAAGAGCGGTCTTTTGGGTATTTCTGGA 831
BSNT_04291___ 940 TTCTCAAGCGATCTTCGTGACATCGTTGAAGCAACGAAAGAAGGAAATGA 989
||||||||||||.|.||.||.||||||||||||||.||||||||.|||||
BL00419___ack 832 TTCTCAAGCGATTTGCGCGATATCGTTGAAGCAACTAAAGAAGGCAATGA 881
BSNT_04291___ 990 GCGCGCGGAAACGGCTCTTGAAGTATTCGCAAGCAGAATCCACAAATACA 1039
.||.||||||||.||.||.||||||||||||||||||||.||.|||||||
BL00419___ack 882 ACGTGCGGAAACAGCACTCGAAGTATTCGCAAGCAGAATTCATAAATACA 931
BSNT_04291___ 1040 TCGGTTCTTACGCTGCAAGAATGAGCGGTGTCGATGCGATCATCTTTACT 1089
||||||||||.||.||..||||||||||.||.||.|||||.||.||.|||
BL00419___ack 932 TCGGTTCTTATGCAGCGCGAATGAGCGGAGTAGACGCGATTATTTTCACT 981
BSNT_04291___ 1090 GCCGGTATCGGTGAAAACAGTGTGGAAGTCAGAGAACGCGTTCTGCGCGG 1139
|||||.|||||.||||||||.||.|||||||||||.||||||||.|..||
BL00419___ack 982 GCCGGCATCGGGGAAAACAGCGTTGAAGTCAGAGAGCGCGTTCTTCATGG 1031
BSNT_04291___ 1140 TTTAGAATTCATGGGCGTATACTGGGATCCTGCGCTT-AATAACGTGCGC 1188
|||.||||||||||||||.||.|||||.||||| ||| ||||||||.|||
BL00419___ack 1032 TTTGGAATTCATGGGCGTCTATTGGGACCCTGC-CTTGAATAACGTCCGC 1080
BSNT_04291___ 1189 GGCGAGGAAGCTTTCATCAGCTATCCGCATTCTCCAGTAAAAGTCATGAT 1238
||..|.|||||.||.||||||||.||||||||.||.|||||||||||..|
BL00419___ack 1081 GGAAAAGAAGCGTTTATCAGCTACCCGCATTCGCCTGTAAAAGTCATCGT 1130
BSNT_04291___ 1239 CATTCCGACTGATGAAGAAGTCATGATTGCGCGCGACGTTGTTCGTTTAG 1288
|||||||||..||||||||||.||||||||..|.|||||.||..|..|.|
BL00419___ack 1131 CATTCCGACGAATGAAGAAGTAATGATTGCAAGAGACGTCGTCAGACTGG 1180
BSNT_04291___ 1289 CAAAATAA 1296
||.|.|||
BL00419___ack 1181 CACACTAA 1188
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