Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04288 and BL00417
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_04288___argG.1.5803.seq
# -bsequence dna-align/BL00417___argG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04288___argG-BL00417___argG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04288___argG-BL00417___argG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04288___argG
# 2: BL00417___argG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1215
# Identity: 961/1215 (79.1%)
# Similarity: 961/1215 (79.1%)
# Gaps: 6/1215 ( 0.5%)
# Score: 3772.0
#
#
#=======================================
BSNT_04288___ 1 ATGTCAGAACAGAAAAAAGTCGTATTAGCATACTCAGGAGGTCTTGATAC 50
|||.|..||.||||||||||.|||||||||||.||||||||.||||||||
BL00417___arg 1 ATGACGCAAAAGAAAAAAGTGGTATTAGCATATTCAGGAGGACTTGATAC 50
BSNT_04288___ 51 TTCCGTCGCAATAAAATGGCTTCAGGAGCAAGGATATAATGTAATCGCCT 100
|||.|||||.|||||.|||||||||||.||.||||||.|||||.|.||||
BL00417___arg 51 TTCTGTCGCGATAAAGTGGCTTCAGGAACAGGGATATGATGTAGTGGCCT 100
BSNT_04288___ 101 GCTGTCTGGATGTCGGTGAGGGCAAAGATTTGGCATTTGTTCAGCAGAAA 150
||||.||.||.|||||.|||||.||.|||.|.||.|||||||||||.|||
BL00417___arg 101 GCTGCCTTGACGTCGGAGAGGGAAAGGATCTCGCCTTTGTTCAGCAAAAA 150
BSNT_04288___ 151 GCGCTTGAAGTCGGCGCGACAAACTCCTACGTGATCGATGCAAAAGAAGA 200
||||||.|||||||.||..|.||.||.||.||.|||||||||||||||||
BL00417___arg 151 GCGCTTCAAGTCGGAGCCTCTAATTCTTATGTTATCGATGCAAAAGAAGA 200
BSNT_04288___ 201 ATTTGCACAGGACTACGCGCTTATTTCTTTGCAGGCCCACACGATGTATG 250
||||||..|.||.|..|||||.|...|..|.||||||||||||.|.||||
BL00417___arg 201 ATTTGCGAAAGAGTTTGCGCTGACCGCCCTCCAGGCCCACACGCTTTATG 250
BSNT_04288___ 251 AAGGAAAATACCCGCTTGTTTCGGCATTATCTCGACCGCTGATCGCGAAA 300
|||||||.||.|||||.||.||.||..|.||..|||||||||||||.|||
BL00417___arg 251 AAGGAAAGTATCCGCTCGTATCAGCCCTGTCCAGACCGCTGATCGCCAAA 300
BSNT_04288___ 301 AAACTGGTTGAAATAGCGGAAAAAGAAGATGCACAGGCGATTGCCCACGG 350
||.||.||.|||.|.||.||.||||||.|.||.||.||..|.||.|||||
BL00417___arg 301 AAGCTCGTCGAAGTGGCTGAGAAAGAAAACGCGCAAGCCGTGGCTCACGG 350
BSNT_04288___ 351 ATGCACAGGGAAAGGAAATGACCAGGTTCGTTTTGAAGTCTCCATTAAAT 400
.||||||||.|||||.||||||||.||.||.||.||.||.||.|||||||
BL00417___arg 351 CTGCACAGGCAAAGGGAATGACCAAGTGCGCTTCGAGGTGTCGATTAAAT 400
BSNT_04288___ 401 CATTAAACCCTGATCTTGAAGTCATCGCGCCGGTTCGCGAATGGCAGTGG 450
|..|.||.||.|||.|.||.||..|.||.||.||.|||||||||.|.|||
BL00417___arg 401 CGCTCAATCCGGATTTGGAGGTGCTGGCACCTGTGCGCGAATGGAAATGG 450
BSNT_04288___ 451 TCACGTGAAGAAGAAATTGAATATGCGGCTAGCCGCGGCATTCCGATTCC 500
||.||.||.|||||.||.|..|||||.|..|..|..||||||||.|||||
BL00417___arg 451 TCTCGCGACGAAGAGATCGCGTATGCAGAAAAGCATGGCATTCCAATTCC 500
BSNT_04288___ 501 GATCAATCTTGACAGCCCGTATTCTATCGACCAAAACCTCTGGGGACGCG 550
||||||||||||||||||||||||.||||||||.|||||.|||||..|..
BL00417___arg 501 GATCAATCTTGACAGCCCGTATTCAATCGACCAGAACCTGTGGGGCAGAA 550
BSNT_04288___ 551 CCAATGAGTGCGGCATTTTAGAAGATCCATGGGCGGCGCCGCCAGAAGGT 600
.||||||.|||||..|..|.||||||||.|||||.|||||.||.|||||.
BL00417___arg 551 GCAATGAATGCGGAGTCCTGGAAGATCCTTGGGCCGCGCCTCCTGAAGGA 600
BSNT_04288___ 601 GCATACGATTTAAC--AGCTCCGCTGGAAAAAACGCCGGACACGCCGGAA 648
||.||.|||||.|| || ||.||.||||||||.|||||.||.||.||.
BL00417___arg 601 GCGTATGATTTGACGAAG--CCTCTTGAAAAAACACCGGATACTCCTGAT 648
BSNT_04288___ 649 GTGATTGAAATTGCATTTGAACAGGGCGTGCCTGTCTCCATTGACGGTGT 698
|||||.|||||.||.||||||.|.|||||.||.||.||||||||||| |.
BL00417___arg 649 GTGATCGAAATCGCTTTTGAAGAAGGCGTTCCCGTATCCATTGACGG-GA 697
BSNT_04288___ 699 TTC-CTACTCGCTTTCTGAGCTGATCTTGAAGCTGAATGAAATGGCGGGG 747
.|| ||||.||||.||.||..||||.||.||||||||||||.|||||||.
BL00417___arg 698 CTCACTACCCGCTGTCAGACTTGATTTTAAAGCTGAATGAACTGGCGGGC 747
BSNT_04288___ 748 GCGCACGGTGTCGGACGTATCGACCACGTGGAAAACCGCCTCGTCGGCAT 797
||.||.||.||.||.||.||||||||.||.|||||||||||.||||||||
BL00417___arg 748 GCACATGGAGTGGGGCGCATCGACCATGTTGAAAACCGCCTTGTCGGCAT 797
BSNT_04288___ 798 TAAATCCCGGGAAGTATACGAATGCCCTGGTGCGATGACACTGATCAAAG 847
.|||||.||.|||||.|||||||||||.||.||||||||..||||.||.|
BL00417___arg 798 CAAATCGCGCGAAGTTTACGAATGCCCGGGCGCGATGACTTTGATTAAGG 847
BSNT_04288___ 848 CGCATAAAGAATTAGAAGATTTGACACTGGTGAAAGAGGTAGCCCACTTT 897
||||.||.||..|.||||||||||||.||||.|||||.||.||.||.||.
BL00417___arg 848 CGCACAAGGAGCTTGAAGATTTGACATTGGTAAAAGAAGTGGCGCATTTC 897
BSNT_04288___ 898 AAACCGATCATCGAGCAAAAAATGTCAGAGATCATTTACAACGGCTTATG 947
|||||.||.|||||.|||||||||.|.||..|.||.||.||||||.|.||
BL00417___arg 898 AAACCTATAATCGAACAAAAAATGGCTGAAGTGATCTATAACGGCCTCTG 947
BSNT_04288___ 948 GTTCTCGCCGTTAAAAGATGCGCTGCACGCTTTCTTAAAAGAAACGCAAA 997
|||.||.|||.|.|||||.|||||...||.||||.|.|||||||||||.|
BL00417___arg 948 GTTTTCTCCGCTTAAAGACGCGCTTTCCGGTTTCCTGAAAGAAACGCAGA 997
BSNT_04288___ 998 AGCATGTCACAGGCATTGTCCGCGTGAAGCTGTTTAAAGGCCATGCAATT 1047
||||||||||.|||.|.||||||||.||||||||||||||||||||.||.
BL00417___arg 998 AGCATGTCACGGGCGTCGTCCGCGTCAAGCTGTTTAAAGGCCATGCGATC 1047
BSNT_04288___ 1048 GTAGAAGGACGTAAATCAGAATACTCTCTATATGATGAAAAACTTGCAAC 1097
||.|||||.|||||.||.||||||||.||.|||||||||||.|||||.||
BL00417___arg 1048 GTTGAAGGGCGTAAGTCCGAATACTCCCTGTATGATGAAAAGCTTGCGAC 1097
BSNT_04288___ 1098 ATATACAAAAGACGATGCATTTGATCACCATGCAGCAATTGGATTTATCG 1147
.||||||||||||||||||||.|||||.||.||.|||.|.||.|||||||
BL00417___arg 1098 GTATACAAAAGACGATGCATTCGATCATCACGCTGCAGTCGGCTTTATCG 1147
BSNT_04288___ 1148 AGCTTTGGGGACTTCCGACAAAAGTGAACAGCATCGTGAAAAAGAAGGAG 1197
||||.||||||||.|||||.|||||.|||||||||||..||||.||||||
BL00417___arg 1148 AGCTGTGGGGACTGCCGACGAAAGTAAACAGCATCGTCCAAAAAAAGGAG 1197
BSNT_04288___ 1198 CAGATTAAAGCATGA 1212
|||||||||||||||
BL00417___arg 1198 CAGATTAAAGCATGA 1212
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