Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04286 and BL00416
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_04286___argH.1.5803.seq
# -bsequence dna-align/BL00416___argH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04286___argH-BL00416___argH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04286___argH-BL00416___argH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04286___argH
# 2: BL00416___argH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1418
# Identity: 1088/1418 (76.7%)
# Similarity: 1088/1418 (76.7%)
# Gaps: 70/1418 ( 4.9%)
# Score: 4194.0
#
#
#=======================================
BSNT_04286___ 1 ATGAAGAAGCTTTGGGGAGGCCGATTTCAAAAAACACCGGAAAAATGGGT 50
|||||.|||||.|||||||||||.||.|||||||||||||||||||||||
BL00416___arg 1 ATGAAAAAGCTGTGGGGAGGCCGGTTCCAAAAAACACCGGAAAAATGGGT 50
BSNT_04286___ 51 CGACGAGTTCGGCGCGTCCATATCA-TTTGAC-CAACATTTAGTTGCT-- 96
|||.|||||||||||.||.|| .|| |||||| .||| |||
BL00416___arg 51 CGATGAGTTCGGCGCATCGAT-CCACTTTGACAAAAC--------GCTTG 91
BSNT_04286___ 97 -----GAAGACATTACAGGGTCTCTCGCACATGCTGCCATGCTGAAAAAA 141
|||||.||..|||||||||||||.||||||.|||||||..|||||
BL00416___arg 92 TAAAAGAAGATATCGCAGGGTCTCTCGCTCATGCTTCCATGCTTGAAAAA 141
BSNT_04286___ 142 TGCGGTATTCTGACAGCAGAAGAAGAGCTGAAAATCCGAGAGGGCCTGA- 190
|||||.|||.|.||.|.||.|||||.|.|.|||||....||.|||||||
BL00416___arg 142 TGCGGCATTTTAACCGAAGCAGAAGCGGTCAAAATAAAGGAAGGCCTGAC 191
BSNT_04286___ 191 ATACCCTTTTGCAAAAAGCAGAGGAGGGAAC--ATTGGAATTCTCAGTCG 238
|| ||||||||||.|||||.|| |...||| |.|.||.||.|||||||
BL00416___arg 192 AT-CCCTTTTGCACAAAGCGGA--AAAAAACGAACTCGATTTTTCAGTCG 238
BSNT_04286___ 239 ATTATGAGGATATTCATTTGAACATTGAGAAAATGCTCATTGACGAAATC 288
|||..||.||||||||..|.|||.|.||.||||||||||||||.||||||
BL00416___arg 239 ATTGCGAAGATATTCACCTCAACCTAGAAAAAATGCTCATTGATGAAATC 288
BSNT_04286___ 289 GGTCCTCTTGGCGGCAAGCTGCATACCGGCAGAAGTCGGAATGACCAGGT 338
||.||.||.|||||.|||||.|||||.|.||||||.||.||.||||||||
BL00416___arg 289 GGGCCGCTCGGCGGAAAGCTTCATACGGCCAGAAGCCGAAACGACCAGGT 338
BSNT_04286___ 339 GGCGACTGACATGCATTTATACTTGAAGAATCATGTCGGCCAC------- 381
||||||.||.|||||..|.||.||.|| .||.|||
BL00416___arg 339 GGCGACGGATATGCACCTGTATTTAAA---------AGGGCACACTGAGC 379
BSNT_04286___ 382 --ATCATCGAGCTGATTGAGGCATTCCAAAGTGCGCTGATTGAAAAGGCG 429
|||||||||||||||..|||.||.|||...|..|||||.|||||.|||
BL00416___arg 380 ATATCATCGAGCTGATTACGGCTTTTCAACACGTTCTGATCGAAAAAGCG 429
BSNT_04286___ 430 GAAGCGAACGTTGAAACGATTCTGCCGGGCTACACACATCTGCAGCGCGC 479
||||...||||.||.|||||.||||||||.|||||.|||.|||||||.||
BL00416___arg 430 GAAGAACACGTGGAGACGATACTGCCGGGATACACCCATTTGCAGCGGGC 479
BSNT_04286___ 480 CCAGCCGATTTCATTCGCTCACCATCTGCTTGCGTATTTCTGGATGCTTG 529
|||||||||.||.|||||.||.|||.||||.||.||||||||||||||.|
BL00416___arg 480 CCAGCCGATCTCGTTCGCGCATCATTTGCTGGCTTATTTCTGGATGCTGG 529
BSNT_04286___ 530 AGCGCGACAAGGAGCGTTTTCAGGATTCGATGAAGCGGATTAACAAATCT 579
|||||||.||.||.||.|.|||.|||||..|.||||||||||||||.|||
BL00416___arg 530 AGCGCGATAAAGAACGCTATCATGATTCATTCAAGCGGATTAACAAGTCT 579
BSNT_04286___ 580 CCGCTCGGCTGCGGGGCGCTCGCGGGAACAACCTTCCCAATTGACCGTGA 629
||.|||||.||||||||||||||.|||||.||.||.||.||.||||||||
BL00416___arg 580 CCTCTCGGATGCGGGGCGCTCGCCGGAACGACGTTTCCGATCGACCGTGA 629
BSNT_04286___ 630 TTATTCAGCAGAACTGCTCGGCTTTGATGCCATTTATGAAAACAGCTTGG 679
.|||||.|||||.|||||||||||||||.|.||.||||||||||||.|||
BL00416___arg 630 ATATTCCGCAGACCTGCTCGGCTTTGATTCGATATATGAAAACAGCCTGG 679
BSNT_04286___ 680 ACGGCGTCAGCGACAGAGACTTCATTTTGGAGTTTTTAAGCAACAGCAGT 729
||||||||||||||||.||.|||||..|.||.|||||||||...|||||.
BL00416___arg 680 ACGGCGTCAGCGACAGGGATTTCATCCTTGAATTTTTAAGCGCGAGCAGC 729
BSNT_04286___ 730 ATGCTGATGATGCACCTATCCCGTTTCTCTGAAGAAATCATTTTATGGTG 779
||.|||||||||||.||.||..|.|||||.||||||||||||.|.|||||
BL00416___arg 730 ATTCTGATGATGCATCTGTCAAGATTCTCCGAAGAAATCATTCTTTGGTG 779
BSNT_04286___ 780 CTCGCAGGAGTTTAAATTCATCGAGCTTGACGATACGTACGCAACAGGAA 829
|||||||||.|||||||||||.||||||||.||.||.|||||.||.||||
BL00416___arg 780 CTCGCAGGAATTTAAATTCATTGAGCTTGATGACACCTACGCGACGGGAA 829
BSNT_04286___ 830 GCAGCATGATGCCGCAAAAGAAAAACCCTGATATGGCGGAGCTGATCCGC 879
||||||||||||||||||||||||||||.||.|||||||||||.||||||
BL00416___arg 830 GCAGCATGATGCCGCAAAAGAAAAACCCGGACATGGCGGAGCTCATCCGC 879
BSNT_04286___ 880 GGCAAAACAGGACGCGTATACGGCGATATGATGGGTCTGTTTACGATCAT 929
||.||||||||||||||||||||.|||.||||.||.||..|.|||||.||
BL00416___arg 880 GGGAAAACAGGACGCGTATACGGTGATCTGATCGGACTCCTCACGATTAT 929
BSNT_04286___ 930 GAAAGGACTTCCGCTCGCTTACAACAAAGATCTGCAGGAAGACAAAGAGG 979
|||.||.||.|||.|.||.|||||.||||||.||||||||||||||||.|
BL00416___arg 930 GAAGGGGCTCCCGTTAGCATACAATAAAGATTTGCAGGAAGACAAAGAAG 979
BSNT_04286___ 980 GCATGTTTGACACGGTGAAAACGGTGGAAGGCAGCCTGCAAATCTTCACA 1029
|.||||||||.||.|||||||||||.|||||.|||||..|.||.||..|.
BL00416___arg 980 GTATGTTTGATACTGTGAAAACGGTCGAAGGAAGCCTTGAGATTTTTGCC 1029
BSNT_04286___ 1030 GGCATGATCCAAACAATGACTGTAAACAAAGACGTCATGAAGCAAGCGAC 1079
||||||||..||||.|||||.||.||||||.|..|.|||||..||||.||
BL00416___arg 1030 GGCATGATTAAAACGATGACAGTGAACAAAAATATGATGAAAAAAGCAAC 1079
BSNT_04286___ 1080 AAAACAAGACTTTTCAAATGCGACGGAACTGGCCGATTATTTAGCTAAAA 1129
..|.||.||.|||||||||||.||.|||||.|||||.|||.|.||.||||
BL00416___arg 1080 GGAGCAGGATTTTTCAAATGCAACTGAACTTGCCGACTATCTGGCGAAAA 1129
BSNT_04286___ 1130 AAGGAATGCCGTTCAGAGAAGCGCATGAAGTGGTCGGGAAACTTGTGTAC 1179
|.||.|||||.||||||||||||||.|||||.|||||.|.||||||.|.|
BL00416___arg 1130 AGGGCATGCCCTTCAGAGAAGCGCACGAAGTCGTCGGAAGACTTGTCTTC 1179
BSNT_04286___ 1180 ACATGCATCGAAAGAGGG-ATCTATTTAAGCGATATGCCGATTGGCGAGT 1228
||.|||||||||| |||| ||.|||.|.||||...|||||.|||..||||
BL00416___arg 1180 ACCTGCATCGAAA-AGGGCATTTATCTCAGCGGCCTGCCGTTTGAAGAGT 1228
BSNT_04286___ 1229 TTCAGCAGGCTAGCACACTATTCGAAGAAGATATTTACACTGTGTTAGAC 1278
|..|..||||.|||...||.||.||||||||..|.||||..|||.|.|||
BL00416___arg 1229 TCAAAAAGGCAAGCGGGCTGTTTGAAGAAGACGTCTACATCGTGCTCGAC 1278
BSNT_04286___ 1279 CCTTACTACGCAGTTGAAAAAAGAATGAGCGCCGGGGGCACCGGATTTAA 1328
||..||.|.||.||.||||||||||||||||..||.||.||.|||||.||
BL00416___arg 1279 CCGCACCATGCCGTCGAAAAAAGAATGAGCGAAGGCGGGACGGGATTCAA 1328
BSNT_04286___ 1329 ACAGGTAAAGCAG--GCGCTTGAAAAAGCGAAAGCTTGCGTGGCAGCTGG 1376
|.||||.| ||| ||..||.||||.||||| ||| |
BL00416___arg 1329 AAAGGTGA--CAGAAGCCATTCAAAAGGCGAA----------GCA----G 1362
BSNT_04286___ 1377 AGTTTG--------TTAA 1386
.||||| ||||
BL00416___arg 1363 TGTTTGAACAATTTTTAA 1380
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