Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04286 and BL00416

See Amino acid alignment / Visit BSNT_04286 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence dna-align/BSNT_04286___argH.1.5803.seq
#    -bsequence dna-align/BL00416___argH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04286___argH-BL00416___argH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04286___argH-BL00416___argH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04286___argH
# 2: BL00416___argH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1418
# Identity:    1088/1418 (76.7%)
# Similarity:  1088/1418 (76.7%)
# Gaps:          70/1418 ( 4.9%)
# Score: 4194.0
# 
#
#=======================================

BSNT_04286___      1 ATGAAGAAGCTTTGGGGAGGCCGATTTCAAAAAACACCGGAAAAATGGGT     50
                     |||||.|||||.|||||||||||.||.|||||||||||||||||||||||
BL00416___arg      1 ATGAAAAAGCTGTGGGGAGGCCGGTTCCAAAAAACACCGGAAAAATGGGT     50

BSNT_04286___     51 CGACGAGTTCGGCGCGTCCATATCA-TTTGAC-CAACATTTAGTTGCT--     96
                     |||.|||||||||||.||.|| .|| |||||| .|||        |||  
BL00416___arg     51 CGATGAGTTCGGCGCATCGAT-CCACTTTGACAAAAC--------GCTTG     91

BSNT_04286___     97 -----GAAGACATTACAGGGTCTCTCGCACATGCTGCCATGCTGAAAAAA    141
                          |||||.||..|||||||||||||.||||||.|||||||..|||||
BL00416___arg     92 TAAAAGAAGATATCGCAGGGTCTCTCGCTCATGCTTCCATGCTTGAAAAA    141

BSNT_04286___    142 TGCGGTATTCTGACAGCAGAAGAAGAGCTGAAAATCCGAGAGGGCCTGA-    190
                     |||||.|||.|.||.|.||.|||||.|.|.|||||....||.||||||| 
BL00416___arg    142 TGCGGCATTTTAACCGAAGCAGAAGCGGTCAAAATAAAGGAAGGCCTGAC    191

BSNT_04286___    191 ATACCCTTTTGCAAAAAGCAGAGGAGGGAAC--ATTGGAATTCTCAGTCG    238
                     || ||||||||||.|||||.||  |...|||  |.|.||.||.|||||||
BL00416___arg    192 AT-CCCTTTTGCACAAAGCGGA--AAAAAACGAACTCGATTTTTCAGTCG    238

BSNT_04286___    239 ATTATGAGGATATTCATTTGAACATTGAGAAAATGCTCATTGACGAAATC    288
                     |||..||.||||||||..|.|||.|.||.||||||||||||||.||||||
BL00416___arg    239 ATTGCGAAGATATTCACCTCAACCTAGAAAAAATGCTCATTGATGAAATC    288

BSNT_04286___    289 GGTCCTCTTGGCGGCAAGCTGCATACCGGCAGAAGTCGGAATGACCAGGT    338
                     ||.||.||.|||||.|||||.|||||.|.||||||.||.||.||||||||
BL00416___arg    289 GGGCCGCTCGGCGGAAAGCTTCATACGGCCAGAAGCCGAAACGACCAGGT    338

BSNT_04286___    339 GGCGACTGACATGCATTTATACTTGAAGAATCATGTCGGCCAC-------    381
                     ||||||.||.|||||..|.||.||.||         .||.|||       
BL00416___arg    339 GGCGACGGATATGCACCTGTATTTAAA---------AGGGCACACTGAGC    379

BSNT_04286___    382 --ATCATCGAGCTGATTGAGGCATTCCAAAGTGCGCTGATTGAAAAGGCG    429
                       |||||||||||||||..|||.||.|||...|..|||||.|||||.|||
BL00416___arg    380 ATATCATCGAGCTGATTACGGCTTTTCAACACGTTCTGATCGAAAAAGCG    429

BSNT_04286___    430 GAAGCGAACGTTGAAACGATTCTGCCGGGCTACACACATCTGCAGCGCGC    479
                     ||||...||||.||.|||||.||||||||.|||||.|||.|||||||.||
BL00416___arg    430 GAAGAACACGTGGAGACGATACTGCCGGGATACACCCATTTGCAGCGGGC    479

BSNT_04286___    480 CCAGCCGATTTCATTCGCTCACCATCTGCTTGCGTATTTCTGGATGCTTG    529
                     |||||||||.||.|||||.||.|||.||||.||.||||||||||||||.|
BL00416___arg    480 CCAGCCGATCTCGTTCGCGCATCATTTGCTGGCTTATTTCTGGATGCTGG    529

BSNT_04286___    530 AGCGCGACAAGGAGCGTTTTCAGGATTCGATGAAGCGGATTAACAAATCT    579
                     |||||||.||.||.||.|.|||.|||||..|.||||||||||||||.|||
BL00416___arg    530 AGCGCGATAAAGAACGCTATCATGATTCATTCAAGCGGATTAACAAGTCT    579

BSNT_04286___    580 CCGCTCGGCTGCGGGGCGCTCGCGGGAACAACCTTCCCAATTGACCGTGA    629
                     ||.|||||.||||||||||||||.|||||.||.||.||.||.||||||||
BL00416___arg    580 CCTCTCGGATGCGGGGCGCTCGCCGGAACGACGTTTCCGATCGACCGTGA    629

BSNT_04286___    630 TTATTCAGCAGAACTGCTCGGCTTTGATGCCATTTATGAAAACAGCTTGG    679
                     .|||||.|||||.|||||||||||||||.|.||.||||||||||||.|||
BL00416___arg    630 ATATTCCGCAGACCTGCTCGGCTTTGATTCGATATATGAAAACAGCCTGG    679

BSNT_04286___    680 ACGGCGTCAGCGACAGAGACTTCATTTTGGAGTTTTTAAGCAACAGCAGT    729
                     ||||||||||||||||.||.|||||..|.||.|||||||||...|||||.
BL00416___arg    680 ACGGCGTCAGCGACAGGGATTTCATCCTTGAATTTTTAAGCGCGAGCAGC    729

BSNT_04286___    730 ATGCTGATGATGCACCTATCCCGTTTCTCTGAAGAAATCATTTTATGGTG    779
                     ||.|||||||||||.||.||..|.|||||.||||||||||||.|.|||||
BL00416___arg    730 ATTCTGATGATGCATCTGTCAAGATTCTCCGAAGAAATCATTCTTTGGTG    779

BSNT_04286___    780 CTCGCAGGAGTTTAAATTCATCGAGCTTGACGATACGTACGCAACAGGAA    829
                     |||||||||.|||||||||||.||||||||.||.||.|||||.||.||||
BL00416___arg    780 CTCGCAGGAATTTAAATTCATTGAGCTTGATGACACCTACGCGACGGGAA    829

BSNT_04286___    830 GCAGCATGATGCCGCAAAAGAAAAACCCTGATATGGCGGAGCTGATCCGC    879
                     ||||||||||||||||||||||||||||.||.|||||||||||.||||||
BL00416___arg    830 GCAGCATGATGCCGCAAAAGAAAAACCCGGACATGGCGGAGCTCATCCGC    879

BSNT_04286___    880 GGCAAAACAGGACGCGTATACGGCGATATGATGGGTCTGTTTACGATCAT    929
                     ||.||||||||||||||||||||.|||.||||.||.||..|.|||||.||
BL00416___arg    880 GGGAAAACAGGACGCGTATACGGTGATCTGATCGGACTCCTCACGATTAT    929

BSNT_04286___    930 GAAAGGACTTCCGCTCGCTTACAACAAAGATCTGCAGGAAGACAAAGAGG    979
                     |||.||.||.|||.|.||.|||||.||||||.||||||||||||||||.|
BL00416___arg    930 GAAGGGGCTCCCGTTAGCATACAATAAAGATTTGCAGGAAGACAAAGAAG    979

BSNT_04286___    980 GCATGTTTGACACGGTGAAAACGGTGGAAGGCAGCCTGCAAATCTTCACA   1029
                     |.||||||||.||.|||||||||||.|||||.|||||..|.||.||..|.
BL00416___arg    980 GTATGTTTGATACTGTGAAAACGGTCGAAGGAAGCCTTGAGATTTTTGCC   1029

BSNT_04286___   1030 GGCATGATCCAAACAATGACTGTAAACAAAGACGTCATGAAGCAAGCGAC   1079
                     ||||||||..||||.|||||.||.||||||.|..|.|||||..||||.||
BL00416___arg   1030 GGCATGATTAAAACGATGACAGTGAACAAAAATATGATGAAAAAAGCAAC   1079

BSNT_04286___   1080 AAAACAAGACTTTTCAAATGCGACGGAACTGGCCGATTATTTAGCTAAAA   1129
                     ..|.||.||.|||||||||||.||.|||||.|||||.|||.|.||.||||
BL00416___arg   1080 GGAGCAGGATTTTTCAAATGCAACTGAACTTGCCGACTATCTGGCGAAAA   1129

BSNT_04286___   1130 AAGGAATGCCGTTCAGAGAAGCGCATGAAGTGGTCGGGAAACTTGTGTAC   1179
                     |.||.|||||.||||||||||||||.|||||.|||||.|.||||||.|.|
BL00416___arg   1130 AGGGCATGCCCTTCAGAGAAGCGCACGAAGTCGTCGGAAGACTTGTCTTC   1179

BSNT_04286___   1180 ACATGCATCGAAAGAGGG-ATCTATTTAAGCGATATGCCGATTGGCGAGT   1228
                     ||.|||||||||| |||| ||.|||.|.||||...|||||.|||..||||
BL00416___arg   1180 ACCTGCATCGAAA-AGGGCATTTATCTCAGCGGCCTGCCGTTTGAAGAGT   1228

BSNT_04286___   1229 TTCAGCAGGCTAGCACACTATTCGAAGAAGATATTTACACTGTGTTAGAC   1278
                     |..|..||||.|||...||.||.||||||||..|.||||..|||.|.|||
BL00416___arg   1229 TCAAAAAGGCAAGCGGGCTGTTTGAAGAAGACGTCTACATCGTGCTCGAC   1278

BSNT_04286___   1279 CCTTACTACGCAGTTGAAAAAAGAATGAGCGCCGGGGGCACCGGATTTAA   1328
                     ||..||.|.||.||.||||||||||||||||..||.||.||.|||||.||
BL00416___arg   1279 CCGCACCATGCCGTCGAAAAAAGAATGAGCGAAGGCGGGACGGGATTCAA   1328

BSNT_04286___   1329 ACAGGTAAAGCAG--GCGCTTGAAAAAGCGAAAGCTTGCGTGGCAGCTGG   1376
                     |.||||.|  |||  ||..||.||||.|||||          |||    |
BL00416___arg   1329 AAAGGTGA--CAGAAGCCATTCAAAAGGCGAA----------GCA----G   1362

BSNT_04286___   1377 AGTTTG--------TTAA   1386
                     .|||||        ||||
BL00416___arg   1363 TGTTTGAACAATTTTTAA   1380


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.