Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04282 and BL00414

See Amino acid alignment / Visit BSNT_04282 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence dna-align/BSNT_04282___ytkK.1.5803.seq
#    -bsequence dna-align/BL00414___fabG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04282___ytkK-BL00414___fabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04282___ytkK-BL00414___fabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04282___ytkK
# 2: BL00414___fabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 788
# Identity:     571/788 (72.5%)
# Similarity:   571/788 (72.5%)
# Gaps:          46/788 ( 5.8%)
# Score: 2048.5
# 
#
#=======================================

BSNT_04282___      1 GTGCGACATGCTTTAATTACTGCCGGTTCGAAGGGTTTAGGCCGCAAAGT     50
                     |||||.|||||.|||||||||||||||||.||.|||||.||.||.|||||
BL00414___fab      1 GTGCGCCATGCGTTAATTACTGCCGGTTCAAAAGGTTTGGGGCGTAAAGT     50

BSNT_04282___     51 GACTGAAACGTTGCTTGCAAAGGGGTATTCAGTAACAGTCAATTACAGAC    100
                     |||.|||.|..||||||.|||.||.||.|||||.||.||.||||||||.|
BL00414___fab     51 GACGGAAGCCCTGCTTGAAAAAGGCTACTCAGTGACGGTGAATTACAGGC    100

BSNT_04282___    101 AGGATGAGGAGGCAGTCAGCCGCCTGAAGGAA----GCCTGTC--CCGAT    144
                     |.||.||.||.||.|||.|||||||.||.|||    |.|.|||  ||   
BL00414___fab    101 AAGACGAAGAAGCTGTCCGCCGCCTCAAAGAAAAATGGCGGTCATCC---    147

BSNT_04282___    145 TGTCTTGACCGGCTGCAATTTGTAAAAGGTGATGTCACCAAAAAAGAAGA    194
                        ||||||||..||||.|||||.||.|||||||||||||..||||||||
BL00414___fab    148 ---CTTGACCGTTTGCAGTTTGTTAAGGGTGATGTCACCAGGAAAGAAGA    194

BSNT_04282___    195 TCTGCTGCGTATTGCAAAGGCTGC-CTTAAACCGCTTCGGAAGGATCGAC    243
                     .|||||.||.||.|..||.||.|| ||| .|.||.||.||||..||.||.
BL00414___fab    195 CCTGCTCCGGATGGTGAATGCCGCTCTT-GAGCGATTTGGAAAAATTGAT    243

BSNT_04282___    244 TTTTTGATTAACAACGCGGGACCATACATATTTGAACGTAAAAAGTTAGC    293
                     .||.||||.||.||.||.||.|||||||||||||||||.||||||.|.||
BL00414___fab    244 CTTCTGATCAATAATGCCGGCCCATACATATTTGAACGAAAAAAGCTTGC    293

BSNT_04282___    294 CGATTATACTGATGATGAATGGTATGGCATGCTGGAAGGAAATTTAAGCG    343
                     .|||||||||||||||||||||||||.||||||.|||||.||.||||||.
BL00414___fab    294 GGATTATACTGATGATGAATGGTATGACATGCTTGAAGGCAACTTAAGCT    343

BSNT_04282___    344 CCGTCTTTCATTTATTCAAAGCGGTTATTCCTGTTATGAGAAAACAGCAA    393
                     |.|||||.|||.|.||.|||||||||.||||..|.|||||....||||..
BL00414___fab    344 CTGTCTTCCATCTGTTTAAAGCGGTTGTTCCGATCATGAGGCGCCAGCGG    393

BSNT_04282___    394 TTTGGACGCATCATTACGTACGGATTCCAAGGTGCGGCTCACGCGCCCGG    443
                     ||.||.||.|||||.||.||||||||.||.||.||.|..||.|||||.||
BL00414___fab    394 TTCGGCCGAATCATCACTTACGGATTTCAGGGGGCCGACCATGCGCCTGG    443

BSNT_04282___    444 CTGGCTTCACCGATCGGCATTTGGCGCTGCGAAAGT-GGGCTTGGCTTCT    492
                     ||||||.||.||.||.||.|||||.||.||.||||| |||| ||||||||
BL00414___fab    444 CTGGCTGCATCGTTCCGCTTTTGGAGCGGCAAAAGTAGGGC-TGGCTTCT    492

BSNT_04282___    493 TTGACGAAGACAATTGCCATTGAAGAAGCCGAATTCGGCATAACCTCCAA    542
                     ||.||.|||||.||.||||||||||||||.|..|.||||||.||..||||
BL00414___fab    493 TTAACAAAGACGATCGCCATTGAAGAAGCGGGCTCCGGCATCACAGCCAA    542

BSNT_04282___    543 CATGGTTTGCCCGGGAGACATTGTCGGCGACATGAAAGAAGCATCGATAG    592
                     ||||||.||.||.||..||||||||||.||.||||||||.||.|||||..
BL00414___fab    543 CATGGTCTGTCCAGGCAACATTGTCGGGGATATGAAAGAGGCCTCGATTT    592

BSNT_04282___    593 AGGAAGCCAGAATGCG--AATCGGCAAAGAAAAAACGCCGATAGGAAGAT    640
                     ..|||||  ||..|||  |.|.|   |.||..||||||||||.||.||.|
BL00414___fab    593 CAGAAGC--GAGGGCGTCACTTG---ATGAGGAAACGCCGATCGGCAGGT    637

BSNT_04282___    641 CCGGTACAGGCGAGGATATCGCCCGGATTATCGCTTTCCTGTGTGAGGAG    690
                     |.||.||.||.||.||.|||||..||||.|||.||||.||.||.||.||.
BL00414___fab    638 CGGGAACCGGTGAAGACATCGCAAGGATCATCACTTTTCTATGCGATGAA    687

BSNT_04282___    691 AACTCAGACCTTGTGACAGGGACTGTCATTGAAGCCACTGGAGGCCTCAA    740
                     .|.||.|||....|.||.||.||.||||||||||||||.||.|||.|.||
BL00414___fab    688 CATTCCGACTACATTACGGGAACAGTCATTGAAGCCACAGGCGGCTTGAA    737

BSNT_04282___    741 TGTCATTAACAAGAATCAAACAACATAA----------    768
                     |||.||||||             |.|.|          
BL00414___fab    738 TGTGATTAAC-------------CGTCATTCTCTCTAG    762


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04282 and BL00414

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
