Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04281 and BL00413
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_04281___ytkL.1.5803.seq
# -bsequence dna-align/BL00413___ytkL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04281___ytkL-BL00413___ytkL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04281___ytkL-BL00413___ytkL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04281___ytkL
# 2: BL00413___ytkL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 691
# Identity: 539/691 (78.0%)
# Similarity: 539/691 (78.0%)
# Gaps: 11/691 ( 1.6%)
# Score: 2061.0
#
#
#=======================================
BSNT_04281___ 1 ATGAAAGTGACATATCACGGACATTCTGTAATCACAGTGGAAACGAAGGA 50
|||||||||.|||||||.||.|||||.||..|.|||||.||.|||...||
BL00413___ytk 1 ATGAAAGTGGCATATCATGGTCATTCAGTGGTAACAGTTGATACGGGAGA 50
BSNT_04281___ 51 CCATCATATTATTTTTGATCCGTTTTTAACAGGGAATTCATTAACGGATA 100
.|||||..|.||.||.|||||||||.|.|||||.||.||||||||.|||.
BL00413___ytk 51 TCATCAGTTGATCTTCGATCCGTTTATTACAGGAAACTCATTAACCGATT 100
BSNT_04281___ 101 TAAAGCCGGAGGATGTAAAAGCGGATGTCATCTTACTAACGCACGGCCAC 150
|||||||.||.|||||.||||||||.||||||||.||.||.|||||.||.
BL00413___ytk 101 TAAAGCCCGAAGATGTCAAAGCGGACGTCATCTTGCTGACTCACGGACAT 150
BSNT_04281___ 151 AATGACCATGTCGGTGATACTGAAC-AAATCGCCAAGCAAAATAACGCGT 199
||.||.||||||||.||||| .|.| ||||||||||||.|||.||..||.
BL00413___ytk 151 AACGATCATGTCGGCGATAC-CATCGAAATCGCCAAGCGAAACAATTCGC 199
BSNT_04281___ 200 TGGTTATAGCCCCGAACGAGCTCGCTGTGTACTTAGGCTGGAAAGGCTTG 249
|.|||.||||.|||||.||.|||||.||.||..||||.|||||||||.||
BL00413___ytk 200 TCGTTGTAGCTCCGAATGAACTCGCGGTCTATCTAGGATGGAAAGGCCTG 249
BSNT_04281___ 250 AATGTTCATCCAATGCATATTGGCGGCTCCCGCCAGTTCGATTTTGGAAA 299
|||||.|||||.|||||.||.||||||||||.||||||||||||||||||
BL00413___ytk 250 AATGTACATCCGATGCACATCGGCGGCTCCCACCAGTTCGATTTTGGAAA 299
BSNT_04281___ 300 AGTGAAGCTTACACAGGCCTTTCATGGATCAGC-CATCACAGATGAAGAA 348
|||.|||||.||.|||||.||.||.|||||.|| .|| ||.||.|||||.
BL00413___ytk 300 AGTCAAGCTGACGCAGGCTTTCCACGGATCGGCTTAT-ACGGAAGAAGAC 348
BSNT_04281___ 349 AACAAAACGATCACTTACACAGGCATGCCTGCCGGTATTTTGCTGACTGT 398
|.|.|||.||||...||.||.||||||||.||.||.||..|.||||||||
BL00413___ytk 349 AGCCAAAAGATCGTCTATACCGGCATGCCGGCGGGGATCCTTCTGACTGT 398
BSNT_04281___ 399 AGAAGATAAAACGATTTTCCACGCGGGCGATACGGCTCTTTTCTCTGATA 448
.||||..|..||||||||.||.||.|||||.||.|..||||||||.||||
BL00413___ytk 399 GGAAGGAAGGACGATTTTTCATGCCGGCGACACCGGGCTTTTCTCAGATA 448
BSNT_04281___ 449 TGAAACTCATTGGCGAATTGAATCATATCGACCTTGCTTTCCTGCCGATT 498
||||.||.||.||.|||||.|||||||||||||||||.|||.|||||||.
BL00413___ytk 449 TGAAGCTGATCGGTGAATTAAATCATATCGACCTTGCCTTCTTGCCGATC 498
BSNT_04281___ 499 GGCGATAACTTTACGATGGGGCCTGAAGACGCCAAGCTTGCCGCTGAATG 548
||||||||.|||||||||||.|||||.||||||||.||.|||||.|||||
BL00413___ytk 499 GGCGATAATTTTACGATGGGCCCTGAGGACGCCAAACTGGCCGCAGAATG 548
BSNT_04281___ 549 GCTGCGCGCAAAACAGGTCGTGCCGGTGCATTACAATACATTCCCGGTCA 598
|||..|.||.||||||||.||.|||||.||.|||...||.|||||.||||
BL00413___ytk 549 GCTCAGAGCGAAACAGGTTGTCCCGGTTCACTACTCGACGTTCCCCGTCA 598
BSNT_04281___ 599 TCGAACAAGACCCAGAAGCATTCGCTGACAGCCTGCCGGGCGGAGTCGGC 648
|||||||.||.||..|.|||||.||.||||||||.||.||.||.|||||.
BL00413___ytk 599 TCGAACAGGATCCGCATGCATTTGCGGACAGCCTTCCTGGAGGCGTCGGA 648
BSNT_04281___ 649 AAAGT-CATGTCGGTCGGTGAGACGATCGAGCTTTAA---- 684
||||| |.|| .||||||||||.|.||||| .|||||
BL00413___ytk 649 AAAGTGCTTG-AGGTCGGTGAGTCAATCGA-ATTTAAGTAA 687
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