Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04268 and BL00406
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence dna-align/BSNT_04268___ytsJ.1.5803.seq
# -bsequence dna-align/BL00406___ytsJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04268___ytsJ-BL00406___ytsJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04268___ytsJ-BL00406___ytsJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04268___ytsJ
# 2: BL00406___ytsJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1241
# Identity: 983/1241 (79.2%)
# Similarity: 983/1241 (79.2%)
# Gaps: 13/1241 ( 1.0%)
# Score: 3881.0
#
#
#=======================================
BSNT_04268___ 1 ATGTCATTAAGAGAAGAAGCATTACACCTGCATAAAGTCAACCAGGGGAA 50
||||||||.|.||||.|||||.|.||..||||.|||||.||||||||.||
BL00406___yts 1 ATGTCATTGAAAGAAAAAGCACTGCATATGCACAAAGTAAACCAGGGCAA 50
BSNT_04268___ 51 ACTGGAGTCTAAATCAAAAGTAGAGGTCAGAAATGCAAAAGATCTAAGCC 100
|.||||.||.|||||||||||..||||..|.|||||..|.|||.||||||
BL00406___yts 51 ATTGGAATCAAAATCAAAAGTGCAGGTTCGCAATGCGGACGATTTAAGCC 100
BSNT_04268___ 101 TCGCTTATTCTCCGGGTGTTGCAGAACCGTGTAAGGATATTCATGAAGAC 150
|.||.||||||||||||||.||.|||||.||.||.|..|||.|.||.||.
BL00406___yts 101 TTGCATATTCTCCGGGTGTGGCTGAACCCTGCAAAGCGATTTACGATGAT 150
BSNT_04268___ 151 ATTAACAAAGTATATGATTATACAATGAAGGGGAACATGGTAGCAGTTGT 200
|..|.|||||||||||||||||||||||||||.||||||||||||||.||
BL00406___yts 151 AACAGCAAAGTATATGATTATACAATGAAGGGAAACATGGTAGCAGTCGT 200
BSNT_04268___ 201 AACTGACGGTACAGCTGTGCTTGGCCTTGGAAACATCGGCCCTGAAGCGG 250
..|.|||||.||.||||||||.|||||.||.||.||||||||||||||.|
BL00406___yts 201 CTCGGACGGAACGGCTGTGCTCGGCCTCGGCAATATCGGCCCTGAAGCCG 250
BSNT_04268___ 251 CGCTTCCTGTTATGGAAGGGAAAGCAGTTCTTTTCAAAAGCTTTGCGGGC 300
|.||.|||||.||||||||.|||||.||||||||||||||||||||.||.
BL00406___yts 251 CCCTCCCTGTGATGGAAGGAAAAGCGGTTCTTTTCAAAAGCTTTGCCGGT 300
BSNT_04268___ 301 GTAGATGCGTTCCCGAT-TGCTTTAAACACAAACGATGTTGATAAAATCG 349
||.||.||.|||||.|| || ||||||.|||...|||||.||||||||.|
BL00406___yts 301 GTGGACGCTTTCCCAATCTG-TTTAAATACATCTGATGTCGATAAAATTG 349
BSNT_04268___ 350 TTGAAACTGTAAAATTGCTGGAACCGACATTTGGCGGCGTCAACCTTGAA 399
||||.||.||.||..||||.||.||||||||.||||||||||||||||||
BL00406___yts 350 TTGAGACGGTCAAGCTGCTTGAGCCGACATTCGGCGGCGTCAACCTTGAA 399
BSNT_04268___ 400 GATATTGCAGCGCCAAACTGCTTTATCATTGAAGAGCGCCTCAAAAAAGA 449
||.||||||||.||||||||.|||.||||||||||.||||||||||||||
BL00406___yts 400 GACATTGCAGCTCCAAACTGTTTTGTCATTGAAGAACGCCTCAAAAAAGA 449
BSNT_04268___ 450 AACAAACATCCCGGTTTTCCATGATGATCAGCACGGTACTGCCATTGTAA 499
|||.||.||.|||||.||.||.|||||.|||||||||||.||.||.||||
BL00406___yts 450 AACGAAAATTCCGGTGTTTCACGATGACCAGCACGGTACAGCAATCGTAA 499
BSNT_04268___ 500 CCGTAGCAGGTCTTGTGAACGCGCTGAAACTGTCTGGAAAATCCATGTCA 549
|.|||||.|||||.||.||.|||||.||.|||||.||.|||.|.|||||.
BL00406___yts 500 CGGTAGCCGGTCTCGTCAATGCGCTTAAGCTGTCCGGCAAAACGATGTCT 549
BSNT_04268___ 550 TCCATTAAAGTTGTCGCAAACGGCGCGGGTGCGGCTGGCATTGCGATTAT 599
|||.|.||||||||.||.||||||||.||.||.||.||.|||||.||.||
BL00406___yts 550 TCCGTCAAAGTTGTGGCGAACGGCGCCGGCGCAGCGGGAATTGCCATCAT 599
BSNT_04268___ 600 CAAGCTTCTTCATCATTATGGCGTTCGCGACATTGTGATGTGCGATTCCA 649
.|||||||||.||||||..|||||.||||||||..|.||||||||..|.|
BL00406___yts 600 TAAGCTTCTTTATCATTTCGGCGTGCGCGACATCATCATGTGCGACACGA 649
BSNT_04268___ 650 AAGGGGCCATTTATGAAGGGCGCCCGAACGGCATGAACGATGTCAAAAAT 699
||||.||.||.||.|||||.||.||||||||||||||||..||.|||.|.
BL00406___yts 650 AAGGCGCGATCTACGAAGGCCGTCCGAACGGCATGAACGCAGTTAAAGAA 699
BSNT_04268___ 700 GAAGTGGCGAAGTTCACGAACCAAGATCGCAAAGACGGTTCTCTGAAAGA 749
|||||.||.||.|..||||||.||.|.||||.|||||||||.||.|||||
BL00406___yts 700 GAAGTCGCAAAATATACGAACAAAAACCGCATAGACGGTTCGCTCAAAGA 749
BSNT_04268___ 750 TGTCATCATTGATGCTGACGTATTTATCGGTGTCTCTGTAGCAGGCGCGT 799
.||.||||..||.||.||.||.||||||||.||.||.||.|.||||||..
BL00406___yts 750 CGTGATCAAAGACGCCGATGTCTTTATCGGGGTTTCCGTCGAAGGCGCTC 799
BSNT_04268___ 800 TAACAAAAGAAATGGTTCAAAGCATGG----CAAAAGATCCGATTATCTT 845
|.|||||||||||||||.||||||||| |||| |||||.|||||
BL00406___yts 800 TGACAAAAGAAATGGTTGAAAGCATGGCTGACAAA----CCGATCATCTT 845
BSNT_04268___ 846 TGCAATGGCAAATCCAAATCCGGAAATCATGCCGGAAGATGCGCGTGAAG 895
.||.|||||.|||||||||||.||.||||||||.|..||.||||.|||||
BL00406___yts 846 CGCCATGGCGAATCCAAATCCTGAGATCATGCCTGCCGAAGCGCATGAAG 895
BSNT_04268___ 896 CCGGAGCAAGCGTTATCGGAACTGGCCGTTCTGACTTCCCGAACCAAGTA 945
|||||||||||||..|.|||||.||.||.|||||||||||.||||||||.
BL00406___yts 896 CCGGAGCAAGCGTCGTTGGAACGGGACGCTCTGACTTCCCTAACCAAGTG 945
BSNT_04268___ 946 AACAATGTTCTTGCATTCCCTGGTATTTTCCGCGGAGCACTTGATGTGCG 995
|||||.|||||.||.||.|||||.||.||||||||.||.||.||.||.||
BL00406___yts 946 AACAACGTTCTCGCTTTTCCTGGCATCTTCCGCGGGGCGCTCGACGTCCG 995
BSNT_04268___ 996 TGCCACTCATATTAACGAGGAAATGAAAATCGCAGCGGTTGAAGCCATTG 1045
.||.||.|||||.||||||||.|||||||||||.||||||||.||.||.|
BL00406___yts 996 CGCGACACATATCAACGAGGAGATGAAAATCGCCGCGGTTGAGGCGATCG 1045
BSNT_04268___ 1046 CTTCACTGGTTTCAGAAGATGAGCTTAGCGCAGATTATGTCATCCCTGCA 1095
|.|||||.|||||.||.||.|||||.||..|.||.||||||||.||.||.
BL00406___yts 1046 CGTCACTCGTTTCCGACGAAGAGCTGAGACCTGAATATGTCATTCCGGCT 1095
BSNT_04268___ 1096 CCGTTTGATAAACGTGTTGCGCCTGCTGTTGCGAAGGCTGTGGCAAAAGC 1145
|||||.|||..|.|.||.||.||.||||||||.||.||.||.||.|||||
BL00406___yts 1096 CCGTTCGATCCAAGGGTCGCACCAGCTGTTGCCAAAGCGGTAGCCAAAGC 1145
BSNT_04268___ 1146 TGCGATGGAAACAGGTGTTGCAAGAATCACTGTTGACCCTGAGGAAGTCG 1195
.||||||||||||||.||||||.|||||..|||.||.||.||.|||||||
BL00406___yts 1146 CGCGATGGAAACAGGCGTTGCACGAATCGATGTCGATCCAGAAGAAGTCG 1195
BSNT_04268___ 1196 CAGAAAAAACAAGAAAACTTAC---GATTATTGGTGAATAA 1233
|.||||||||||||||.|||.| ||||...||..|||||
BL00406___yts 1196 CTGAAAAAACAAGAAAGCTTGCAGTGATTGAAGGGAAATAA 1236
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