Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04261 and BL00401
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence dna-align/BSNT_04261___fxsA.1.5803.seq
# -bsequence dna-align/BL00401___fxsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04261___fxsA-BL00401___fxsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04261___fxsA-BL00401___fxsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04261___fxsA
# 2: BL00401___fxsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 267/404 (66.1%)
# Similarity: 267/404 (66.1%)
# Gaps: 37/404 ( 9.2%)
# Score: 783.5
#
#
#=======================================
BSNT_04261___ 1 ATGAGATTATTGTTTTTGCTTTTTATT-------GTGTTTCCGGCAATAG 43
|||| .|||||| |||.||||| .|.|||||.||.|..|
BL00401___fxs 1 ATGA------AGTTTTT-CTTATTATTTCTCGTCATTTTTCCAGCGAGTG 43
BSNT_04261___ 44 AAATCGGCATATTCCTATTTTTAGGCAAGCTGATTGGCATTTTACCGACA 93
|||||||..|.|||||.||.|..|..||...|||.||..|..|.|||||.
BL00401___fxs 44 AAATCGGTCTGTTCCTCTTGTCCGCTAATTGGATCGGTGTGCTGCCGACC 93
BSNT_04261___ 94 GTTCTATTCATGATTCTGACGGGCATTATCGGCGCAGCAGCT-GCAAAAA 142
|||.|..|.||.|||.||||||||.||.||||.||.|| .|| ||.||||
BL00401___fxs 94 GTTTTGCTGATCATTTTGACGGGCTTTCTCGGGGCCGC-TCTCGCCAAAA 142
BSNT_04261___ 143 AACAAGGAACCGAAGTGTATTATAAGGTTCAGCGTGATCTTCAATATGGC 192
|||||||||.||||||.||.||.||.||.|||||.||||||||.||.||.
BL00401___fxs 143 AACAAGGAATCGAAGTCTACTACAAAGTCCAGCGCGATCTTCAGTACGGA 192
BSNT_04261___ 193 AAAATGCCGGGAGAAGCGATTGCTGACGGTCTGTGCATTTTCATTGGCGG 242
||.|||||.||.|..||||||...|||||.||.||.||||||||.||.||
BL00401___fxs 193 AAGATGCCTGGGGCCGCGATTTTGGACGGGCTTTGTATTTTCATAGGGGG 242
BSNT_04261___ 243 TCTATTGCTGATGCTTCCGGGCTTTTTATCAGATTTGGCCGGCGCCTGT- 291
..|..||||..||||.||.||.||||||||.|||.|...||| |.|
BL00401___fxs 243 CATGCTGCTTTTGCTGCCCGGTTTTTTATCGGATATCATCGG----TTTA 288
BSNT_04261___ 292 ---CTTCTTATCCCGTTTACCCGCGGCTGGTGTAAGCCGATTCTGT---T 335
||.||..|.|||...||.||||||.|.|..||.||..||.|.| .
BL00401___fxs 289 CTGCTGCTGCTGCCGGCAACGCGCGGCCGTTTCAAACCATTTATCTCCCG 338
BSNT_04261___ 336 CAAATGGCTGAGAG-GTATGTC-GAAGAATAAGCGGAT---CATCATCAA 380
||| ||||| || |.||||| |||| ..|.|||||| |||.|||||
BL00401___fxs 339 CAA---GCTGA-AGAGAATGTCTGAAG-GCAGGCGGATCAACATTATCAA 383
BSNT_04261___ 381 ATAA 384
||||
BL00401___fxs 384 ATAA 387
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