Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04242 and BL00391

See Amino acid alignment / Visit BSNT_04242 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:20
# Commandline: needle
#    -asequence dna-align/BSNT_04242___ytaG.1.5803.seq
#    -bsequence dna-align/BL00391___coaE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04242___ytaG-BL00391___coaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04242___ytaG-BL00391___coaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04242___ytaG
# 2: BL00391___coaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 641
# Identity:     416/641 (64.9%)
# Similarity:   416/641 (64.9%)
# Gaps:          82/641 (12.8%)
# Score: 1188.5
# 
#
#=======================================

BSNT_04242___      1 TTGACCTTAGTCATTGGTTTAACGGGAGGAATAGCTAGCGGCAAAAGCAC     50
                     |||||.||.|||||.||.|||||.||.||.||.||.||||||||||||||
BL00391___coa      1 TTGACATTGGTCATCGGGTTAACCGGGGGGATTGCCAGCGGCAAAAGCAC     50

BSNT_04242___     51 GGTAGC-CAATATGCT----GATTGAAAAAGGAATAACAGTTATAGATGC     95
                     .||.|| ||| |||.|    .|.||    .||.||.||.||..|.|||||
BL00391___coa     51 TGTCGCGCAA-ATGTTCCAGCAGTG----CGGCATCACGGTCGTCGATGC     95

BSNT_04242___     96 AGATATCATTGCAAAACAAGCGGTAGAAAAAGGGATGCCGGCCTACCGGC    145
                     .||..|.||.||.|||.|.||.||.|||.|.||||||||.||.||.|.|.
BL00391___coa     96 GGACGTGATCGCGAAAGAGGCCGTTGAACAGGGGATGCCCGCTTATCAGA    145

BSNT_04242___    146 AAATCATTGACGA-ATTCGGTGAAGACATACTGCTCTCAAA-TGGCGATA    193
                     |||||..||| || |||.|||||||.|.|.||||| |.||| .|||||||
BL00391___coa    146 AAATCGCTGA-GACATTTGGTGAAGGCGTGCTGCT-TGAAACAGGCGATA    193

BSNT_04242___    194 TAGATCGAAAAAAGCTTGGAGCGCTGGTATTTACAAATGAACAAAAACGT    243
                     |.||.||.|.|||.|||||||...|.||.|||.|.||||||.|||||.|.
BL00391___coa    194 TCGACCGGAGAAAACTTGGAGAAATTGTTTTTGCTAATGAAGAAAAAAGG    243

BSNT_04242___    244 CTCGC-TTTAAATGCAATTGTTCATCCCGCAGTCAGGCAGGAA--ATGCT    290
                     || || .|||||||||||.||.|||||||.|||.||  |..||  |||.|
BL00391___coa    244 CT-GCAGTTAAATGCAATCGTCCATCCCGAAGTGAG--AAAAATGATGAT    290

BSNT_04242___    291 CAATCGCCGTGATGAAGCCGTTGCAAATCGGGAGGC---------ATTTG    331
                     |||.|..||.||.||||||       |||.|  |||         .||||
BL00391___coa    291 CAAGCAGCGCGACGAAGCC-------ATCCG--GGCCGGTGAACGGTTTG    331

BSNT_04242___    332 TTGTATTGGATATCCCGCTATTGTTCGAAAGC--------AAATTGGAAT    373
                     ||||..|.|||||.|||||.||.|..||||||        |.|||.||  
BL00391___coa    332 TTGTTCTCGATATTCCGCTTTTATATGAAAGCGGGCTCGAACATTTGA--    379

BSNT_04242___    374 CATTGGTTGATAAAATTATTGTGGTCAGTGTGACAAAAGATCTTCAACTG    423
                     ||      ||||||.|.||.||.|||.|.||..|.|..||.|||||.||.
BL00391___coa    380 CA------GATAAAGTGATCGTTGTCTGGGTTCCGATGGAGCTTCAGCTT    423

BSNT_04242___    424 GAACGTCTGATGAAGCGCAATCAGCTGACGGAAGAAGAAGCAGTCAGCCG    473
                     ||.||.||||||||..|.||.|.|||.|...||||.||.||..|.|.|.|
BL00391___coa    424 GAGCGGCTGATGAAAAGAAACCGGCTTAATAAAGACGAGGCGCTGAACAG    473

BSNT_04242___    474 TATCCGCTCTCA--AATGCCCTTAGAGGAAAAAACAGCAAAA--GCAGAT    519
                     .||.|.|.|.||  ||| |.||| ||.||||||| || ||||  |||||.
BL00391___coa    474 AATTCACGCCCAGCAAT-CTCTT-GACGAAAAAA-AG-AAAAGGGCAGAC    519

BSNT_04242___    520 CAAGTCATTGATAACAGCGGCACGCTTGAAGAGACCAAAAG-GCAGCTTG    568
                     ...||.||.|||||||||||||..||..||||.| ||.||| |||||||.
BL00391___coa    520 GCGGTGATCGATAACAGCGGCAGTCTGAAAGATA-CAGAAGCGCAGCTTC    568

BSNT_04242___    569 ATGAAAT-CATGA-ACAGCTGGGCATAA-------------    594
                     ||.|..| |.||| |||  |||.|| ||             
BL00391___coa    569 ATCAGCTGCTTGATACA--TGGTCA-AATATTGAAAAGTGA    606


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