Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04242 and BL00391
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence dna-align/BSNT_04242___ytaG.1.5803.seq
# -bsequence dna-align/BL00391___coaE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04242___ytaG-BL00391___coaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04242___ytaG-BL00391___coaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04242___ytaG
# 2: BL00391___coaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 641
# Identity: 416/641 (64.9%)
# Similarity: 416/641 (64.9%)
# Gaps: 82/641 (12.8%)
# Score: 1188.5
#
#
#=======================================
BSNT_04242___ 1 TTGACCTTAGTCATTGGTTTAACGGGAGGAATAGCTAGCGGCAAAAGCAC 50
|||||.||.|||||.||.|||||.||.||.||.||.||||||||||||||
BL00391___coa 1 TTGACATTGGTCATCGGGTTAACCGGGGGGATTGCCAGCGGCAAAAGCAC 50
BSNT_04242___ 51 GGTAGC-CAATATGCT----GATTGAAAAAGGAATAACAGTTATAGATGC 95
.||.|| ||| |||.| .|.|| .||.||.||.||..|.|||||
BL00391___coa 51 TGTCGCGCAA-ATGTTCCAGCAGTG----CGGCATCACGGTCGTCGATGC 95
BSNT_04242___ 96 AGATATCATTGCAAAACAAGCGGTAGAAAAAGGGATGCCGGCCTACCGGC 145
.||..|.||.||.|||.|.||.||.|||.|.||||||||.||.||.|.|.
BL00391___coa 96 GGACGTGATCGCGAAAGAGGCCGTTGAACAGGGGATGCCCGCTTATCAGA 145
BSNT_04242___ 146 AAATCATTGACGA-ATTCGGTGAAGACATACTGCTCTCAAA-TGGCGATA 193
|||||..||| || |||.|||||||.|.|.||||| |.||| .|||||||
BL00391___coa 146 AAATCGCTGA-GACATTTGGTGAAGGCGTGCTGCT-TGAAACAGGCGATA 193
BSNT_04242___ 194 TAGATCGAAAAAAGCTTGGAGCGCTGGTATTTACAAATGAACAAAAACGT 243
|.||.||.|.|||.|||||||...|.||.|||.|.||||||.|||||.|.
BL00391___coa 194 TCGACCGGAGAAAACTTGGAGAAATTGTTTTTGCTAATGAAGAAAAAAGG 243
BSNT_04242___ 244 CTCGC-TTTAAATGCAATTGTTCATCCCGCAGTCAGGCAGGAA--ATGCT 290
|| || .|||||||||||.||.|||||||.|||.|| |..|| |||.|
BL00391___coa 244 CT-GCAGTTAAATGCAATCGTCCATCCCGAAGTGAG--AAAAATGATGAT 290
BSNT_04242___ 291 CAATCGCCGTGATGAAGCCGTTGCAAATCGGGAGGC---------ATTTG 331
|||.|..||.||.|||||| |||.| ||| .||||
BL00391___coa 291 CAAGCAGCGCGACGAAGCC-------ATCCG--GGCCGGTGAACGGTTTG 331
BSNT_04242___ 332 TTGTATTGGATATCCCGCTATTGTTCGAAAGC--------AAATTGGAAT 373
||||..|.|||||.|||||.||.|..|||||| |.|||.||
BL00391___coa 332 TTGTTCTCGATATTCCGCTTTTATATGAAAGCGGGCTCGAACATTTGA-- 379
BSNT_04242___ 374 CATTGGTTGATAAAATTATTGTGGTCAGTGTGACAAAAGATCTTCAACTG 423
|| ||||||.|.||.||.|||.|.||..|.|..||.|||||.||.
BL00391___coa 380 CA------GATAAAGTGATCGTTGTCTGGGTTCCGATGGAGCTTCAGCTT 423
BSNT_04242___ 424 GAACGTCTGATGAAGCGCAATCAGCTGACGGAAGAAGAAGCAGTCAGCCG 473
||.||.||||||||..|.||.|.|||.|...||||.||.||..|.|.|.|
BL00391___coa 424 GAGCGGCTGATGAAAAGAAACCGGCTTAATAAAGACGAGGCGCTGAACAG 473
BSNT_04242___ 474 TATCCGCTCTCA--AATGCCCTTAGAGGAAAAAACAGCAAAA--GCAGAT 519
.||.|.|.|.|| ||| |.||| ||.||||||| || |||| |||||.
BL00391___coa 474 AATTCACGCCCAGCAAT-CTCTT-GACGAAAAAA-AG-AAAAGGGCAGAC 519
BSNT_04242___ 520 CAAGTCATTGATAACAGCGGCACGCTTGAAGAGACCAAAAG-GCAGCTTG 568
...||.||.|||||||||||||..||..||||.| ||.||| |||||||.
BL00391___coa 520 GCGGTGATCGATAACAGCGGCAGTCTGAAAGATA-CAGAAGCGCAGCTTC 568
BSNT_04242___ 569 ATGAAAT-CATGA-ACAGCTGGGCATAA------------- 594
||.|..| |.||| ||| |||.|| ||
BL00391___coa 569 ATCAGCTGCTTGATACA--TGGTCA-AATATTGAAAAGTGA 606
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