Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04231 and BL00385
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:19
# Commandline: needle
# -asequence dna-align/BSNT_04231___dnaI.1.5803.seq
# -bsequence dna-align/BL00385___dnaI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04231___dnaI-BL00385___dnaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04231___dnaI-BL00385___dnaI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04231___dnaI
# 2: BL00385___dnaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 996
# Identity: 684/996 (68.7%)
# Similarity: 684/996 (68.7%)
# Gaps: 123/996 (12.3%)
# Score: 2260.5
#
#
#=======================================
BSNT_04231___ 1 ATGGAACC----AATCGGCCGTTCTCTGCAGGGCGTAAC--CGGCAGGCC 44
|||||.|| ||.|| || ||.||||.|||||.|| || ||.||
BL00385___dna 1 ATGGAGCCGATTAAACG--CG--CTTTGCAAGGCGTGACGACG--AGACC 44
BSNT_04231___ 45 GGATTTCCAAAAACGTCTTGAACAAATGAAGGAAAAAG-----TCATGAA 89
.|||||..|||||||.||||||.|.|||||.||||||| || |||
BL00385___dna 45 CGATTTTAAAAAACGCCTTGAAGATATGAAAGAAAAAGTGCTCTC-TGA- 92
BSNT_04231___ 90 AGATCAA-GATGTTCAAGCATTTTTGAAGGAAAACGA----------AGA 128
||| ||||||||.||.||||| |||| | |||
BL00385___dna 93 ----CAAGGATGTTCAGGCGTTTTT------AAAC-AGCCGCCAGTCAGA 131
BSNT_04231___ 129 AGTGATTGACCAAAAAATGATCGAAAAGAGCTTAAATAAGCTTTATGAAT 178
|||| ||.|||..|||||||||.|.||||.|.||.|||||||||||||
BL00385___dna 132 AGTG---GATCAAGGAATGATCGACAGGAGCCTTAACAAGCTTTATGAAT 178
BSNT_04231___ 179 ATATCGAACAAAGC-AAGAATTGCTCCTATTGTTCGGAAGA--------- 218
|||...|.|||||| |||.||..| ||||
BL00385___dna 179 ATACACAGCAAAGCAAAGCATGCC-------------AAGACTGCCCGGG 215
BSNT_04231___ 219 --TGAAA-ACTGCAACAATTTGTTGGAGGGCTACCATCCGAAGCTTGTTG 265
||||| |.|||||.||..||.|..||||.||.|||||.||||||||..
BL00385___dna 216 TCTGAAAGAATGCAAAAACCTGATACAGGGTTATCATCCAAAGCTTGTGC 265
BSNT_04231___ 266 TCAATGGGAGGTCTATTGATATCGAGT--ATTACGA---ATGTCCAG-TC 309
|.||.||.|...|.||.||| || |.||||| .|||||.| ..
BL00385___dna 266 TGAACGGAAAAACAATCGAT-----GTTCAATACGATAGGTGTCCGGAAA 310
BSNT_04231___ 310 AAACGGAAGCTCGACCAGCAGAAGAAACAAAAGTCTCTTATGAAAAGCAT 359
|||.|.|||| .|||.||..|.|.|.|||.|.|||.||.||.||||||||
BL00385___dna 311 AAAAGAAAGC-GGACGAGAGGGAAAGACAGAGGTCGCTGATTAAAAGCAT 359
BSNT_04231___ 360 GTATATCCAGCAGGATCTTCTCGGA--GCGACGTT--CCAGCAAGTTGAT 405
.|||||.||.||||||||||| || ||.||||| || |||
BL00385___dna 360 CTATATTCAACAGGATCTTCT--GAATGCTACGTTTGCC--------GAT 399
BSNT_04231___ 406 AT-----CAG-TGACCCGAGCAGGCTCGCGAT-----GT--TTCAGCATG 442
|| .|| ||||||||||| ||| || ||||||.||
BL00385___dna 400 ATTGACGGAGATGACCCGAGCA-------GATTGAAGGTCCTTCAGCTTG 442
BSNT_04231___ 443 TTACAGACTTCCTGAAAAGCTATAATGAGACGGGAAAAGGGAAAGG-ATT 491
|.||.|..|||.||.|...||||||.||.||||||||.||.||||| |||
BL00385___dna 443 TGACGGGATTCTTGCATGACTATAACGAAACGGGAAAGGGAAAAGGCATT 492
BSNT_04231___ 492 ATATTTATACGGGAAATTCGGGGTAGGAAAAACGTTTATGCTCGCTGCGA 541
||..|.||||||||.||||||||.|||||.||.||||||||.||.||.|
BL00385___dna 493 -TACGTCTACGGGAAGTTCGGGGTCGGAAAGACCTTTATGCTGGCCGCCA 541
BSNT_04231___ 542 TTGCCAATGAGCTGGCGGAAAAAGAGTATTCCTCCATGATTGTCTATGTG 591
||||.||||||||.||.|.|||.||..||.|.|||||..|.||||||||.
BL00385___dna 542 TTGCAAATGAGCTTGCCGCAAAGGATCATCCGTCCATTCTCGTCTATGTC 591
BSNT_04231___ 592 CCTGAATTTGTGAGAGAGCTTAAGAATTCGCTGCAAGACCAGACATTGGA 641
|||||||||||.||.|||||.||.|||.||.|.||.||.|||.|..|.||
BL00385___dna 592 CCTGAATTTGTCAGGGAGCTGAAAAATGCGATACATGATCAGTCGCTTGA 641
BSNT_04231___ 642 AGAGAAGCTCAATATGGTAAAGACCACACCCGTATTGATGCTTGATGACA 691
.||.|||||..|||||||.|||.|.||.||..|..|||||||.|||||||
BL00385___dna 642 GGAAAAGCTTGATATGGTCAAGTCTACGCCGATTCTGATGCTCGATGACA 691
BSNT_04231___ 692 TCGGAGCAGAATCAATGACAAGCTGGGTAAGGGATGAAGTCATCGGAACG 741
||||.||.||.||.|||.||||||||||.||||||||.||..||||..|.
BL00385___dna 692 TCGGTGCGGAGTCCATGTCAAGCTGGGTGAGGGATGAGGTGCTCGGCGCC 741
BSNT_04231___ 742 GTGCTTCAACACAGAATGTCCCAGCAGCTGCCTACTTTCTTTTCTTCTAA 791
.|.|||||.|||||||||||||||||||||||.||.||.||.|||||.||
BL00385___dna 742 ATCCTTCAGCACAGAATGTCCCAGCAGCTGCCGACGTTTTTCTCTTCAAA 791
BSNT_04231___ 792 TTTCTCA-CCTGACGAGCTGAAGCATCATTTTACGTATTCGCAGAGGGGA 840
.|| |.| |||||.||.|||||.||.|||||.||.||||||||.||||||
BL00385___dna 792 CTT-TGATCCTGATGAACTGAAACACCATTTCACCTATTCGCAAAGGGGA 840
BSNT_04231___ 841 GAAAAAGAAGAAGTAAAAGCTGCAAGATTAATGGAGCGGATATTATATTT 890
||||||||||||||||||||.|||||..|.|||||..||.|..|.|||||
BL00385___dna 841 GAAAAAGAAGAAGTAAAAGCGGCAAGGCTGATGGAAAGGGTGCTGTATTT 890
BSNT_04231___ 891 GGCTGCTCCGATCCGCCTTGACGGAGAAAACCGCCGCCATCCATAA 936
.||..|.||..||||.||.|||||..|||||||.|| ||..|||
BL00385___dna 891 AGCGACGCCTGTCCGGCTGGACGGGAAAAACCGGCG---TCAGTAA 933
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