Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04324 and BL00376
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence dna-align/BSNT_04324___acuA.1.5803.seq
# -bsequence dna-align/BL00376___acuA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04324___acuA-BL00376___acuA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04324___acuA-BL00376___acuA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04324___acuA
# 2: BL00376___acuA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 644
# Identity: 488/644 (75.8%)
# Similarity: 488/644 (75.8%)
# Gaps: 22/644 ( 3.4%)
# Score: 1817.0
#
#
#=======================================
BSNT_04324___ 1 GTGGAACATCATAAAACATACCATTCAGCAAACATCAAAACAGCA-ACC- 48
|||||.|||||.|||||.||.||| ||.|| |.||..||| |||
BL00376___acu 1 GTGGAGCATCACAAAACTTATCAT---GCCAA----AGAATTGCAGACCG 43
BSNT_04324___ 49 -----GGCTCTTTACTGATAGAAGGGCCTGTCTCTCCAGAGGATTTGGCA 93
||||||.|.||||||||.||.|||.||..|||.||..|..|.|||
BL00376___acu 44 AGAAAGGCTCTGTGCTGATAGAGGGCCCTATCAGTCCCGAAAAACTCGCA 93
BSNT_04324___ 94 GGTTATGAGTTTCATAAAGATTTAACCGCATTTCGCCCGCCTCGCGAGCA 143
|..|||||.|||||..|.||..|.||.||.||||||||..|.|...|.||
BL00376___acu 94 GAATATGAATTTCACGACGAGCTTACAGCCTTTCGCCCATCACAAAAACA 143
BSNT_04324___ 144 GCATGAAGCGCTAGTCGACATTGCAGGCCTTCCCGAAGGGCGCATTATTA 193
.||||||||..||.||||.||.|||||.|||||||||||.||.||.||.|
BL00376___acu 144 ACATGAAGCATTAATCGAAATCGCAGGGCTTCCCGAAGGACGAATCATCA 193
BSNT_04324___ 194 TTGCCAGAGATGGCCG---AACCATTATCGGCTATGTCACGTATTTATAT 240
|.|||.| |..||| |||||||.||||||||||.||.|||.|.|||
BL00376___acu 194 TCGCCCG---TTTCCGGCAAACCATTGTCGGCTATGTGACATATGTTTAT 240
BSNT_04324___ 241 CCTGACCCGCTCGAAAGATGGTCTGAAGGAAATATGGAGGATTTGATTGA 290
||.||||||||.||||||||||||||||||||.|||||..||||.||.||
BL00376___acu 241 CCAGACCCGCTTGAAAGATGGTCTGAAGGAAACATGGAAAATTTAATCGA 290
BSNT_04324___ 291 GCTCGGAGCCATCGAAGTAGCGCCGGACTATC-GGGGATGCGCTGTCGGA 339
|||.||||||||||||||....|||| |..|| |.||...|.|||||||.
BL00376___acu 291 GCTTGGAGCCATCGAAGTCATTCCGG-CGTTCAGAGGTCACTCTGTCGGG 339
BSNT_04324___ 340 AAGACGCTCCTGACCGTCAGCATGATGGATGAACAAATGGAAAACTACAT 389
||||||||.||..|.|||||||||||||||...||.||||||||.||.||
BL00376___acu 340 AAGACGCTGCTTGCGGTCAGCATGATGGATCCGCAGATGGAAAAATATAT 389
BSNT_04324___ 390 TGTGATGACGACAGAATATTACTGGCATTGGGATTTAAAAGGGATGAAAA 439
|.|.||.|||||.|||||||||||||||||||||.||||.||||..||.|
BL00376___acu 390 TATCATCACGACTGAATATTACTGGCATTGGGATCTAAAGGGGACTAACA 439
BSNT_04324___ 440 AAGATGTGTGGGAATACAGAAAGATCATGGAAAAGATGATGAATGCAGGC 489
|||||||.|||||||||||||||||.|||||.||||||||||||||.||.
BL00376___acu 440 AAGATGTTTGGGAATACAGAAAGATGATGGAGAAGATGATGAATGCCGGA 489
BSNT_04324___ 490 GGATTGGTCTGGTTTGCAACGGATGAGCCGGAGATCAGCTCCCACCCTGC 539
|||.|.|||||||||||.||.||.||.|||||.|||||||||||.||.||
BL00376___acu 490 GGACTTGTCTGGTTTGCGACAGACGATCCGGAAATCAGCTCCCATCCCGC 539
BSNT_04324___ 540 AAACTGTCTGATGGCCCGCATTGGGAAAAACGTCAGCCAAGAATCAATTG 589
.||||||.|.|||||.|||||.||.|||.|.|||||.||.|||||.||.|
BL00376___acu 540 CAACTGTTTAATGGCACGCATCGGAAAAGAGGTCAGTCAGGAATCGATCG 589
BSNT_04324___ 590 AGCAATTTGACAGGCTCCGTTTTTATCATCGTTATATGTATTAA 633
|||..||||||||.|||.|.||..|..||||||.||||||||||
BL00376___acu 590 AGCGTTTTGACAGACTCAGATTCCACAATCGTTTTATGTATTAA 633
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