Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04316 and BL00373
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence dna-align/BSNT_04316.1.5803.seq
# -bsequence dna-align/BL00373___ytsP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04316-BL00373___ytsP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04316-BL00373___ytsP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04316
# 2: BL00373___ytsP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity: 358/504 (71.0%)
# Similarity: 358/504 (71.0%)
# Gaps: 21/504 ( 4.2%)
# Score: 1203.5
#
#
#=======================================
BSNT_04316 1 ATGTTCCATGTCG-AAAAACAATCTGGAGATAAAGAAAAAGACTATCAGC 49
|||||.||||||| |||||||....|.|| ||||||||||.|.||..|||
BL00373___yts 1 ATGTTTCATGTCGAAAAAACAGAAGGCAG-TAAAGAAAAAAAATACGAGC 49
BSNT_04316 50 TTCTGCTAAAACAGCTCGAAGCCATGACCGAAGACGAAACAGACCAAATA 99
||||.||.||||||.||||.||..||||.||||.||||.|.||....||.
BL00373___yts 50 TTCTCCTCAAACAGATCGATGCGCTGACAGAAGGCGAACCTGATATGATC 99
BSNT_04316 100 GCTAACTA-TGCAAATGCCTCAGCACTGCTGTATCATTCGCTGCCTGAAG 148
||.|| || .|||||.||.||.||.||..|||||||.||..||...||.|
BL00373___yts 100 GCCAA-TACAGCAAACGCTTCCGCTCTTTTGTATCAATCATTGGAAGACG 148
BSNT_04316 149 TCAACTGGGCGGGTTTCTATTTTGCCAAAGAAGAGGATGGACAGCTTGTG 198
|||||||||||||.||.|||||||||||| ||.||..||||||||
BL00373___yts 149 TCAACTGGGCGGGCTTTTATTTTGCCAAA------GACGGTGAGCTTGTG 192
BSNT_04316 199 TTAGGTCCGTTCCAAGGCCTCCCGGCATGTGTTCGGATTCCTTTCGGCAG 248
.|.||.||||||||.||.||.||.|||||.||..|.||.||.|||||.|.
BL00373___yts 193 CTCGGGCCGTTCCAGGGACTTCCTGCATGCGTAAGAATCCCGTTCGGGAA 242
BSNT_04316 249 AGGGGTTTGCGGCACAGCGTACGCAAACGGAAAAGTGGAACGTGTTGAGG 298
|||.||.||||||||.||.||..|||||||....||.||.||.|||||.|
BL00373___yts 243 AGGCGTCTGCGGCACCGCTTATACAAACGGCCGGGTCGAGCGCGTTGAAG 292
BSNT_04316 299 ATGTAAACGCGTTTCCTGGACATATCGCCTGCGATGCAGCGTCCCAATCA 348
||||.|||||.||.||.|||||.||.||.||.|||||||||||||||||.
BL00373___yts 293 ATGTGAACGCATTCCCCGGACACATTGCGTGTGATGCAGCGTCCCAATCC 342
BSNT_04316 349 GAAATTGTGCTTCCGATTCGTGTAGACGGAAAAATTGTCGGCGTCTTGGA 398
|||||.||..|||||.||...||.|||||.|..||..||||.||..|.||
BL00373___yts 343 GAAATCGTAGTTCCGCTTGAAGTTGACGGGAGCATCATCGGAGTGCTCGA 392
BSNT_04316 399 CATCGACAGCCCAGTGAAAAACCGTTTCGACGAAATTGATGAAAAATACT 448
.|||||||||||..|.||||||||.|||||.||||.||||||..|.||.|
BL00373___yts 393 TATCGACAGCCCGATTAAAAACCGCTTCGATGAAACTGATGAGTATTATT 442
BSNT_04316 449 TAACTCAATTTGCCGAAACGCTAGAAAAAGCGTT--AGCG--------CA 488
|.|...|.||..|.||.|.|||.| .|.|||||| |||| |.
BL00373___yts 443 TGAAAAAGTTCACGGAGAAGCTTG-GAGAGCGTTTAAGCGAAAAGAGCCG 491
BSNT_04316 489 GTAA 492
||||
BL00373___yts 492 GTAA 495
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