Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04302 and BL00367

See Amino acid alignment / Visit BSNT_04302 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence dna-align/BSNT_04302___ppnK.1.5803.seq
#    -bsequence dna-align/BL00367___ppnK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04302___ppnK-BL00367___ppnK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04302___ppnK-BL00367___ppnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04302___ppnK
# 2: BL00367___ppnK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 826
# Identity:     595/826 (72.0%)
# Similarity:   595/826 (72.0%)
# Gaps:          50/826 ( 6.1%)
# Score: 2074.0
# 
#
#=======================================

BSNT_04302___      1 ATGACCGATCAACGCCGTAATGTTTATTTTTTTCACAAACAGGATC-AGG     49
                     .||||.|   |.|||||.||..|||||||.|||.||||| |..|.| |.|
BL00367___ppn      1 GTGACAG---ACCGCCGAAACATTTATTTCTTTTACAAA-AAAAGCGAAG     46

BSNT_04302___     50 AAACGAACGAACAAGCCCGCTCGT---------TAACACAATTGGCGGAA     90
                     ||||..||||.||         ||         |.|.|||..|.||.|||
BL00367___ppn     47 AAACCGACGAGCA---------GTGCAAAAAACTGAAACAGCTTGCCGAA     87

BSNT_04302___     91 GAGCATGGATTTACCGTTGTGAACCAGCACTCAGACGCTAATATTATCGC    140
                     ||.||.||||||..|||.||..||||.|||...||.||.|||||||||||
BL00367___ppn     88 GAACACGGATTTCGCGTCGTTCACCATCACAATGAAGCCAATATTATCGC    137

BSNT_04302___    141 TAGCATTGGCGGGGACGGCACATTTTTGCAGGCAGTCAGAAAGACGAATT    190
                     .|||||.|||||.|||||.||||||||||||||.||..||||||||||.|
BL00367___ppn    138 AAGCATCGGCGGCGACGGGACATTTTTGCAGGCTGTTCGAAAGACGAACT    187

BSNT_04302___    191 TTCGTGACGACTGCTTGTACGTCGGCATTACCAAAAAGGGGAAAGCTCAT    240
                     |..|.||.||||||.|||||||.|||.|..||||||||||||||||||||
BL00367___ppn    188 TCAGGGATGACTGCCTGTACGTAGGCGTGGCCAAAAAGGGGAAAGCTCAT    237

BSNT_04302___    241 TTATATTGC-GACTTTCATAGTGATGAGCGAGAAAAAATGGTCGATGCAA    289
                     ||.|| ||| ||.|||.|||...||||....||.||||||.|.||.||.|
BL00367___ppn    238 TTGTA-TGCGGATTTTAATATATATGATACCGATAAAATGATTGAAGCGA    286

BSNT_04302___    290 TGACGTTTGAACAAATTGAAGTGAGAAAATATCCGCTGATTGAAGTGACA    339
                     ..|..|..||.|||||.||.||.|||||||||||.|||||.||.||.||.
BL00367___ppn    287 CAAACTCGGAGCAAATCGAGGTCAGAAAATATCCTCTGATCGATGTAACC    336

BSNT_04302___    340 GTGGATAACG---CCAGTCCTTTTCATTGCCTAAACGAGGTTTCCATCCG    386
                     ||   |.|||   ||||   .|||||.||.|||||.||.||.||||||||
BL00367___ppn    337 GT---TGACGGGACCAG---CTTTCAATGTCTAAATGAAGTATCCATCCG    380

BSNT_04302___    387 TTCAAGCATCATTAAAACCTTTGTGATGGACGTGCT-GATTGACGATCTG    435
                     |||||||||.||||||||.|||||.|||||||| || .||.||.|||||.
BL00367___ppn    381 TTCAAGCATTATTAAAACATTTGTAATGGACGT-CTATATAGATGATCTT    429

BSNT_04302___    436 CACTTTGAAACGTTTAGAGGTGACGGAATGATCATCTCAACGCCTACAGG    485
                     ||.||||||||.||..|.||.||||||||||||.|.||.||.||.||.||
BL00367___ppn    430 CATTTTGAAACATTCCGGGGGGACGGAATGATCGTGTCCACTCCGACCGG    479

BSNT_04302___    486 CAGCACCGCCTATAACAAGTCTGTTGCAGGAGCGGTTGTTGATCCGCTGC    535
                     .||||||||.||||||||.||.||||..||.||..|.||||||||||||.
BL00367___ppn    480 AAGCACCGCTTATAACAAATCGGTTGATGGGGCAATCGTTGATCCGCTGA    529

BSNT_04302___    536 TCCCATGCATGCAGGTATCTGAGCTTGCTTCTCTTAACAATAACACCTAC    585
                     |.||||||||.|||||..|.|||||.|||||..|.|||||.|||||.|||
BL00367___ppn    530 TTCCATGCATACAGGTGACAGAGCTCGCTTCATTGAACAACAACACATAC    579

BSNT_04302___    586 CGGACACTCGGCTCGCCATTTGTCCTCAGCTCTGACCGAAAGCTGACCCT    635
                     .|.||.|||||||||||.|||.|..|.|||.|.||.|||||||||||..|
BL00367___ppn    580 AGAACCCTCGGCTCGCCGTTTATTTTAAGCGCGGATCGAAAGCTGACATT    629

BSNT_04302___    636 -----TCGTGTGGTGCAGGACGGCAACGAACACCCAATCATCGGCTTGGA    680
                          ||     ||.||||||||.|||||..|.||.|||||||||.|.||
BL00367___ppn    630 AAAAATC-----GTCCAGGACGGGAACGACTATCCGATCATCGGCCTTGA    674

BSNT_04302___    681 CAATGAAGCACTCAGCACGAGAAATGTGAAAACGA--TCGAAATCAAACT    728
                     .||.|||||..||||.||||..|||||||||  ||  |||||.|||..||
BL00367___ppn    675 TAACGAAGCCTTCAGTACGATGAATGTGAAA--GAAGTCGAAGTCAGCCT    722

BSNT_04302___    729 GTCTAATAAGAAAATCAAAACAGTCAAACTAAAGGACAATTCATTTTGGG    778
                     .||....||||..||||||||..|.|||.||||.||.|||||.||.||||
BL00367___ppn    723 CTCCGGCAAGATGATCAAAACCATTAAATTAAAAGATAATTCGTTCTGGG    772

BSNT_04302___    779 AAAAAGTGAAGCGTACTTTTTTATAG    804
                     |||||||.|.|||.||.|||.||||.
BL00367___ppn    773 AAAAAGTAAGGCGCACATTTCTATAA    798


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04302 and BL00367

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
