Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04275 and BL00366

See Amino acid alignment / Visit BSNT_04275 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence dna-align/BSNT_04275___ytpI.1.5803.seq
#    -bsequence dna-align/BL00366___ytpI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04275___ytpI-BL00366___ytpI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04275___ytpI-BL00366___ytpI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04275___ytpI
# 2: BL00366___ytpI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 341
# Identity:     201/341 (58.9%)
# Similarity:   201/341 (58.9%)
# Gaps:          76/341 (22.3%)
# Score: 521.0
# 
#
#=======================================

BSNT_04275___      1 ATGCTGGTTCTTGTTTTTTTGATTGGGCTTTCCGCCTGCT--TTTATGTG     48
                     ||||.|.||.||||||||||.||||.|.||||.||  |.|  .|||||||
BL00366___ytp      1 ATGCCGTTTTTTGTTTTTTTTATTGTGGTTTCAGC--GATAGCTTATGTG     48

BSNT_04275___     49 TACTATAAAGTAAAAGGCGTACGGGC--------AAAGCCATCTTTGGCA     90
                     ||||..|||||||    .|||.|.||        |||||   ..|||  |
BL00366___ytp     49 TACTTCAAAGTAA----GGTATGTGCGCACCAAAAAAGC---GGTTG--A     89

BSNT_04275___     91 AAAGAAATA-TGTTCAGCAAAATCAAGCAT-------GGCCTTAGGGTCA    132
                     |..|.|||| |.|||.||.||.||||||||       |||||    ||  
BL00366___ytp     90 ACGGGAATACTATTCGGCCAAGTCAAGCATGAGTCTGGGCCT----GT--    133

BSNT_04275___    133 CTAGTCCTGTTCTACGG-GCTCAACCAAATGATATTATTCCATTCAGTAT    181
                      |..||.||||||.||| || |||.||..||||.|||..||  .|.|   
BL00366___ytp    134 -TTATCATGTTCTTCGGCGC-CAATCAGCTGATTTTAAACC--GCGG---    176

BSNT_04275___    182 TAACG------TTAGTAATCGGCGGTATCTTTA------------TCGTC    213
                      .|||      .|.||.|||||||.|||.||||            |||  
BL00366___ytp    177 -CACGCTGGCTGTCGTCATCGGCGTTATTTTTATGCTGACCGGGCTCG--    223

BSNT_04275___    214 ATAGGAGCAGGAAGCGCTTGGGCAGGTTATAAAGCCTTCAGGCATTACAA    263
                        ||||||.|       |||||.||.||.||.||||..|.|||.|| ..
BL00366___ytp    224 ---GGAGCATG-------TGGGCCGGCTACAAGGCCTATAAGCACTA-TG    262

BSNT_04275___    264 TCCCCTT-CACGCCAAAGAAGCTGAAAGAGATCACGCGTAA    303
                     ||||.|| |..||.||||||...|||.|.||..||||.|||
BL00366___ytp    263 TCCCTTTGCTTGCGAAAGAAAACGAACGGGAGAACGCATAA    303


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