Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04271 and BL00364

See Amino acid alignment / Visit BSNT_04271 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence dna-align/BSNT_04271___ytrI.1.5803.seq
#    -bsequence dna-align/BL00364___ytrI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04271___ytrI-BL00364___ytrI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04271___ytrI-BL00364___ytrI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04271___ytrI
# 2: BL00364___ytrI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 517
# Identity:     384/517 (74.3%)
# Similarity:   384/517 (74.3%)
# Gaps:          26/517 ( 5.0%)
# Score: 1422.0
# 
#
#=======================================

BSNT_04271___      1 ATGAGGGTCCCCCAACATTACAAAAAACCGGGATGGCAGCGTTTTTTCGC     50
                     |||||..||||.|.|.||||.|||||.||.||.||||||||||||||.||
BL00364___ytr      1 ATGAGAATCCCTCCATATTATAAAAAGCCTGGGTGGCAGCGTTTTTTTGC     50

BSNT_04271___     51 GGGAATGATGTGCGGGGCCGTAATCAGCTGGTTCTTTTTCCTGTTTACCT    100
                     |||||||||||||||.|||.|.||||||||||||.|.|||||||||||.|
BL00364___ytr     51 GGGAATGATGTGCGGAGCCATCATCAGCTGGTTCGTGTTCCTGTTTACAT    100

BSNT_04271___    101 ACGGAACATTCCAAGAGGAGCAGGTCAGCCTCATC---GAAAAGCAAAAA    147
                     |||||||.||.||.|||.||||||||..|.|.|||   |||   ||.|||
BL00364___ytr    101 ACGGAACCTTTCAGGAGAAGCAGGTCGTCTTGATCAGGGAA---CAGAAA    147

BSNT_04271___    148 GAGC---------ATGTAAAAGACTTGAACA-ATCAAATTTCGATCTATC    187
                     ||||         ||.||||     |||.|| ||||     |.||.||.|
BL00364___ytr    148 GAGCGCATCAATGATTTAAA-----TGACCAGATCA-----CCATTTACC    187

BSNT_04271___    188 AGGAAGACCTCCATAAACTGAATGAAGATAATAAAAGAAAACTGCTGATT    237
                     ..||.||.||.|||||.|||||||||||.|||||||||||||||||||||
BL00364___ytr    188 GCGAGGATCTGCATAAGCTGAATGAAGACAATAAAAGAAAACTGCTGATT    237

BSNT_04271___    238 CAAAGCGTCAGCGTCAAATTGCTGAATGGAGATAAATATAAAATATCACA    287
                     |||||||||..||||||..||.|.||.||..|..||||.||..|.|||||
BL00364___ytr    238 CAAAGCGTCGACGTCAAGCTGATCAACGGCAAGCAATACAAGCTGTCACA    287

BSNT_04271___    288 GCCGGATAAAACGAAATTCGAGGAGCATGTAAAGGATGATATTTCAGAGG    337
                     ||||||.|..|.|||.||.|||||||||.|...||||.|.||||||||.|
BL00364___ytr    288 GCCGGACATGATGAACTTTGAGGAGCATATCCGGGATAACATTTCAGATG    337

BSNT_04271___    338 TGATTACAAAAGACATAGAGAGCGTCTATCAAACAAAGGATCTCTTGAAG    387
                     |.||||||||.||.||.||.||||||||.|..||.|||||.||.||.|||
BL00364___ytr    338 TCATTACAAAGGATATCGAAAGCGTCTACCGGACGAAGGAGCTTTTAAAG    387

BSNT_04271___    388 CGGACAATTGAAAATAAAGTCTATATGATCAATGAAAAAAAATACGAGGC    437
                     |||||.|||||||||||||..||||.|||.||.||.|||||.|||.||||
BL00364___ytr    388 CGGACGATTGAAAATAAAGAGTATACGATAAACGATAAAAAGTACAAGGC    437

BSNT_04271___    438 AACCGTCAGAGAATTGATTATTTATACGAGGCTGACAGTGGAACTTGAAA    487
                     .|..||||..|||.|||..|||||||||.||||..|.||.|||.|..|||
BL00364___ytr    438 GAAAGTCACCGAACTGACGATTTATACGCGGCTTTCCGTTGAAATCAAAA    487

BSNT_04271___    488 TATCTTTCGCCACATAA    504
                     |.|||||..||..||||
BL00364___ytr    488 TCTCTTTTTCCGAATAA    504


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