Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04258 and BL00362
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence dna-align/BSNT_04258___ytvI.1.5803.seq
# -bsequence dna-align/BL00362___ytvI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04258___ytvI-BL00362___ytvI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04258___ytvI-BL00362___ytvI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04258___ytvI
# 2: BL00362___ytvI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1199
# Identity: 749/1199 (62.5%)
# Similarity: 749/1199 (62.5%)
# Gaps: 166/1199 (13.8%)
# Score: 2108.0
#
#
#=======================================
BSNT_04258___ 1 GTGAATCAATCTTATATCAC-------------------TAT------TT 25
.||||.|||||.|||.|||| ||| ||
BL00362___ytv 1 TTGAACCAATCCTATCTCACAGCTGCGCTTCGGGCAGTGTATGTGCTGTT 50
BSNT_04258___ 26 TTTTCAGAACCCTCTTTGTCATATCAATGACCGCAG-GGTCGATAGCTGC 74
||| ||.|.||.|||| ||.|| ||||
BL00362___ytv 51 TTT---GACCGCTGTTTG-------------CGGAGCGGTC--------- 75
BSNT_04258___ 75 GGCCTATTATTCGTTTCCGTTAACTTATCCGTTCCTGATCGCCCTTATTC 124
|.|||.||.||.|||||||||||.|||||.||..||||.||.|||||||
BL00362___ytv 76 -GGCTACTACTCTTTTCCGTTAACCTATCCTTTTGTGATTGCGCTTATTC 124
BSNT_04258___ 125 T-TTCTTCAGTGATTCATCCTGTTGTCGATTATTTGGACAAAGTGACAGG 173
| ..|.||| ||||..|||||.||||.||.|...|.||.||..||||.||
BL00362___ytv 125 TCGCCATCA-TGATCAATCCTTTTGTGGAATGGCTCGATAAGCTGACCGG 173
BSNT_04258___ 174 ATTCCCCCGA-ACGATAAATGTTCTGGG---CGTTCT----TGCTTTTTT 215
.|||||..|| .|| |.|||| |.|| |||||| .|||||||.
BL00362___ytv 174 GTTCCCGAGAGGCG-TCAATG---TCGGAATCGTTCTGTTCGGCTTTTTG 219
BSNT_04258___ 216 TCTGCTCGCAGCCTTCGGCGTCCTTACCATTCTGGTAGCCGAAATCGTAA 265
.|.|| ||.||| ||||.|..|.||..|..|.||.|||||.|||||..
BL00362___ytv 220 ACCGC-CGGAGC---CGGCTTTTTGACACTGGTCGTTGCCGAGATCGTCT 265
BSNT_04258___ 266 CGGGAACAGCCTATCTAGCAAAAACGCTGCCTCCGCATATCAGCACGTTT 315
|.|||||.||||||.|.||.||||..||.||.|..|| ||||
BL00362___ytv 266 CTGGAACGGCCTATTTGGCTAAAATACTTCCCCTCCA---------GTTT 306
BSNT_04258___ 316 A------------TTTCATATTGCGAAAAATTGTTTACAACTCATATTCA 353
| ||| |||| ||||...||.|||||.|.||| |.|||
BL00362___ytv 307 AATAAAGCCGCTCTTT-ATAT--CGAATCGTTTTTTACGAATCA-AATCA 352
BSNT_04258___ 354 -GCCGCTCTATAACGAGTTAACT-----CTTTTGTTTCAAGAATTGGAAA 397
||||||.|||||.||| || ||||| |||.|.|...|.|||.
BL00362___ytv 353 TGCCGCTGTATAATGAG----CTGGCCGCTTTT-TTTGACGGCCTTGAAG 397
BSNT_04258___ 398 CGAACCAGCAGGCTTCCATCGTCACTCATATCCAGACACTCGGAGATTCT 447
|...||||||||..||.|||.|.||.||..|||| |.|||..
BL00362___ytv 398 CCGCCCAGCAGGAATCGATCATTACACAGGTCCA---------AAATTTG 438
BSNT_04258___ 448 GCCGCTAAAAATGC--CGGGC-------TCCTGCTGTCCCACATTCTAGA 488
|.|..|.||..||| |.||| |..||||.||..|.|||||.||
BL00362___ytv 439 GGCAGTGAACTTGCTTCAGGCACGGCTTTATTGCTTTCAAAAATTCTTGA 488
BSNT_04258___ 489 GATGATCCCGAGATTTTTCGCTCTTCTTCCCAATACGGCGGCGGTTCTGA 538
||.|.|.||....||||||||..||||.||.||||.||||||.||.||||
BL00362___ytv 489 GACGGTGCCCCTTTTTTTCGCCTTTCTGCCGAATATGGCGGCCGTGCTGA 538
BSNT_04258___ 539 TTTTTTCTCTTCTGGCAACCTTTTTTATGA-CAAAGGATTGGCATAAGCT 587
|.|||||.||.|||||.||.||||||||.| |||| |||..||||||..|
BL00362___ytv 539 TCTTTTCGCTCCTGGCCACTTTTTTTATCAGCAAA-GATCTGCATAAAAT 587
BSNT_04258___ 588 -GAAAGCCATGCTTGTTTTAATTCTGCCGGATCGTGTGA---CAGCTAAC 633
.|||.|.|.||..|.|.| .||||.||.||||||.||| |.|.|
BL00362___ytv 588 ACAAAACAAGGCACGGTCT-GTTCTTCCTGATCGTCTGATCTCGGGT--- 633
BSNT_04258___ 634 AGCAAAGCG-------ATCAGCAGCGAATTAAAAAAAGCAATGACTGGTT 676
|| |||| || ||| |||||.||||.||||.||.|.||.|
BL00362___ytv 634 -GC--AGCGGCTGTCTAT--GCA--GAATTGAAAAGAGCACTGGCAGGCT 676
BSNT_04258___ 677 TTATCAAAGCACAAGCCGT---CCTCGTTTTCATCACGATGGTGATTGTA 723
||.|.||.|| |.||| | |||.||....||.|||||||||.|.||.
BL00362___ytv 677 TTGTGAAGGC-CCAGC--TTACCCTTGTGGCGATGACGATGGTGCTCGTG 723
BSNT_04258___ 724 TTTATCGGCCTTTCTCTCTTAAAGGTTGAACACGCCGCAACAATTGCTTT 773
||.|||||.|||||..|.||.|||||..|.||.||.|...|.||.|||||
BL00362___ytv 724 TTGATCGGGCTTTCCGTGTTGAAGGTCAATCATGCTGTGGCGATCGCTTT 773
BSNT_04258___ 774 TTTAATCGGGCTTGTAGATCTTCTCCCTTACTTAGGTGCCGGCTCCGTAT 823
|.|.||||||||.||.||.||.||.||.||.||.||..|.||.||.||||
BL00362___ytv 774 TCTGATCGGGCTGGTCGACCTGCTGCCGTATTTGGGAACAGGGTCTGTAT 823
BSNT_04258___ 824 TTGTGCCCTGGATTTTGTATTTATCGATTACGGGC----CAGCTGCCCCA 869
|||||||.||||||.|.||||||.| |..||| ||||||||.|.
BL00362___ytv 824 TTGTGCCGTGGATTGTCTATTTAGC----AGCGGCCAAACAGCTGCCGCT 869
BSNT_04258___ 870 AGCGATCGGAATCGGTATCCTGTACCTCGTCGTTCT--TATTCAGCGGCA 917
.||||||||..|.||.||.||||||.|||||||.|| |.|||| ||||
BL00362___ytv 870 GGCGATCGGCCTTGGAATTCTGTACATCGTCGTACTTGTCTTCA--GGCA 917
BSNT_04258___ 918 GCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGG 967
|||..|.||.||.|||||..||||....||.|||||..|..|.||..|||
BL00362___ytv 918 GCTTGCCGAACCGAAGATTTTAAGCCGGTCAATCGGACTTCACCCTTTGG 967
BSNT_04258___ 968 CAACGCTCATCGCCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGA 1017
.|||..|.|||||.|||||||||||.||.|||||.||.||.|||.|.|||
BL00362___ytv 968 GAACATTAATCGCGCTGTTTGCCGGTTTCAAATTGTTTGGCTTTCTCGGA 1017
BSNT_04258___ 1018 CTGATTGCGGGACCCGCTGTACTCGTCATCATCCAAGCTTTCATCACAAC 1067
.||||...|||.|||||..|.|||||..|.||.||.|||.||.|.|||||
BL00362___ytv 1018 TTGATCATGGGCCCCGCCCTTCTCGTTCTTATTCAGGCTCTCTTTACAAC 1067
BSNT_04258___ 1068 AGGCGCATTAAAAGAAATATGGTCCTATATCACCGTTCAGCAAAAATAA 1116
|||....||.|.|||.||||||...|.|||.|..|...|..||||||||
BL00362___ytv 1068 AGGTATTTTTAGAGACATATGGCTGTTTATTAAAGGAAATGAAAAATAA 1116
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