Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04216 and BL00358
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence dna-align/BSNT_04216___lrgB.1.5803.seq
# -bsequence dna-align/BL00358___lrgB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04216___lrgB-BL00358___lrgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04216___lrgB-BL00358___lrgB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04216___lrgB
# 2: BL00358___lrgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 704
# Identity: 530/704 (75.3%)
# Similarity: 530/704 (75.3%)
# Gaps: 28/704 ( 4.0%)
# Score: 1982.0
#
#
#=======================================
BSNT_04216___ 1 ATGGAAAGCACAATGAGTCCTTATTTTGGGATTGTCGTATCACTTGCTGC 50
||||..||||||||.||.||.|||||.|||||.||.||
BL00358___lrg 1 ------------ATGACACCTTATTTCGGTATCGTCGTTTCACTGGCCGC 38
BSNT_04216___ 51 ATTCGGCATCGGCACCTTTTTATTTAAGAAAACGAAAGGCTTCTTCCTTT 100
|||.||||.||||||.|||||||||||.|||.|.||.||.||.|||.|.|
BL00358___lrg 39 ATTTGGCACCGGCACTTTTTTATTTAAAAAATCAAATGGTTTTTTCTTAT 88
BSNT_04216___ 101 TCACTCCTTTGTTTGTTGCCATGGTGCTGGGGATCGCATTTTTAAAAATC 150
||||.|||.|||||||.||.|||.|.||.||||||||.||||||||||||
BL00358___lrg 89 TCACGCCTCTGTTTGTCGCGATGATTCTTGGGATCGCGTTTTTAAAAATC 138
BSNT_04216___ 151 GGCGGTTTTTCCTACGCGGATTATAATAACGGGGGAGAGATCATTAAGTT 200
|||||||||||.||.|.|||.||.||.|.|||.|||||.|||||||||||
BL00358___lrg 139 GGCGGTTTTTCATATGAGGACTACAAGAGCGGCGGAGACATCATTAAGTT 188
BSNT_04216___ 201 TTTCCTTGAACCGGCAACGATCGCATTTGCAATTCCTTTGTACAAACAAA 250
.||..|.||.||.||.||.||.||.||.||.||||||||.||.|||||..
BL00358___lrg 189 CTTTTTGGAGCCCGCCACAATTGCGTTCGCCATTCCTTTATATAAACAGG 238
BSNT_04216___ 251 GAGATAAGCTTAAAAAATACTGGTGGCAAATCATGGCCTCCATTATTGCC 300
..||.|||.|.|||||.||.|||..|||||||.|.|...||||||||||.
BL00358___lrg 239 CGGACAAGTTGAAAAAGTATTGGCTGCAAATCCTTGGTGCCATTATTGCA 288
BSNT_04216___ 301 GGCTCTATCTGCTCTGTCACGATTGTTTATTTGCTCGCTAAAGGC-ATTC 349
|||||..|||||||.||..|..|.||.|||.||.|||| |||.|| .|.|
BL00358___lrg 289 GGCTCCGTCTGCTCGGTTGCCGTCGTCTATCTGATCGC-AAACGCGCTCC 337
BSNT_04216___ 350 ATCTCGATTCG--GCCGTAATGAAAAGCATGCTTCCGCAGGCGGCTACAA 397
||||.|| || |||||.||||||||||||||.||.|||||.||.||||
BL00358___lrg 338 ATCTTGA--CGGAGCCGTCATGAAAAGCATGCTGCCCCAGGCCGCCACAA 385
BSNT_04216___ 398 CGGCAATTGCGCTTCCTTTATCAAAAGGCATCGG-GGGCATCAGCGACAT 446
||||.|||||.|||||||||||||||||.||||| |||..||| .||.||
BL00358___lrg 386 CGGCGATTGCTCTTCCTTTATCAAAAGGGATCGGCGGGATTCA-AGATAT 434
BSNT_04216___ 447 CACAGCCTTTGCGGTCATCTTTAACGCTGTCATCGTATATGCGCTCGGAG 496
.||.|||||.||.||||||||||||||.||.|||||.|||||||||||.|
BL00358___lrg 435 TACGGCCTTCGCCGTCATCTTTAACGCAGTGATCGTCTATGCGCTCGGCG 484
BSNT_04216___ 497 CATTGTTCTTGAAGGTGTTTAAAGTGAAAAATCCGATTTCTAAAGGATTG 546
|..|.||.|||||..|.||.||||||.|..|||||||..|.|||||.|||
BL00358___lrg 485 CGCTTTTTTTGAAAATCTTCAAAGTGCAGCATCCGATCGCCAAAGGGTTG 534
BSNT_04216___ 547 GCTCTTGGAACATCCGGACATGCACTTGGTGTAGCGGTCGGGATTGAGAT 596
||.||.||||||||.||||||||.||.||.||.||.|||||.||||||||
BL00358___lrg 535 GCGCTCGGAACATCAGGACATGCCCTCGGCGTCGCCGTCGGAATTGAGAT 584
BSNT_04216___ 597 GGGAGAAGTTGAAGCTGCGATGGCAAGTATTGCTGTTGTCGTAGTAGGAG 646
|||.|||||.|||||.||.|||||.||||||||.||||||||.||.||.|
BL00358___lrg 585 GGGGGAAGTCGAAGCGGCAATGGCGAGTATTGCAGTTGTCGTCGTCGGCG 634
BSNT_04216___ 647 TGGTAACGGTTTTGGTCATCCC----TGTGTTCGTGCAGCTGATCGGTGG 692
|.||.||.||.||.|||.|.|| |||||| ||..|||||||.||
BL00358___lrg 635 TCGTGACCGTGTTTGTCGTTCCGTTATGTGTT----CAAATGATCGGCGG 680
BSNT_04216___ 693 ATAA 696
|||.
BL00358___lrg 681 ATAG 684
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