Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04214 and BL00357

See Amino acid alignment / Visit BSNT_04214 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence dna-align/BSNT_04214___infC.1.5803.seq
#    -bsequence dna-align/BL00357___infC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04214___infC-BL00357___infC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04214___infC-BL00357___infC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04214___infC
# 2: BL00357___infC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 564
# Identity:     423/564 (75.0%)
# Similarity:   423/564 (75.0%)
# Gaps:          63/564 (11.2%)
# Score: 1803.0
# 
#
#=======================================

BSNT_04214___      0 --------------------------------------------------      0
                                                                       
BL00357___inf      1 ATGAGTTGTGAAATCAATTCAAAGATTCTATGGAGGTGGCTCATTATTAG     50

BSNT_04214___      1 ----------TTGGTTAATGAGGGTATCCGTGCACGTGAGGTCCGTTTAA     40
                               |||||||||||||||||||||||.|||||.||.|||||.|
BL00357___inf     51 CAAAGATCAATTGGTTAATGAGGGTATCCGTGCGCGTGAAGTTCGTTTGA    100

BSNT_04214___     41 TCGGACAAAATGGCGACCAGCTTGGAATCAAGTCCCGTCAGGAAGCACTT     90
                     ||||||||||||||||.||||||||.|||||.|||||.|||||||||||.
BL00357___inf    101 TCGGACAAAATGGCGATCAGCTTGGGATCAAATCCCGCCAGGAAGCACTG    150

BSNT_04214___     91 GAAATCGCCGGCCGCGCAAATCTTGACCTTGTGTTAGTTGCAGCGAATGC    140
                     |||||.||.||.|||||||||||||||||||||||.||||||||||||||
BL00357___inf    151 GAAATTGCGGGTCGCGCAAATCTTGACCTTGTGTTGGTTGCAGCGAATGC    200

BSNT_04214___    141 AAAACCGCCTGTCTGCCGAATCATGGACTACGGTAAGTTCCGATTTGAGC    190
                     ||||||||||||||||||.|||||||||||.||.||||.|.||||.||||
BL00357___inf    201 AAAACCGCCTGTCTGCCGGATCATGGACTATGGAAAGTACAGATTCGAGC    250

BSNT_04214___    191 AGCAGAAAAAGGAAAAAGAAGCACGCAAGAATCAAAAAATCATTAACTTA    240
                     |||||||.||||||||.|||||||||||.|||||||||||||||||||||
BL00357___inf    251 AGCAGAAGAAGGAAAAGGAAGCACGCAAAAATCAAAAAATCATTAACTTA    300

BSNT_04214___    241 AAAGAAGTTCGGTTAAGTCCGACAATCGATGAGCATGACTTTAACACGAA    290
                     ||||||||||||.|.||.||....||.||.||.||.|||||.||.||.||
BL00357___inf    301 AAAGAAGTTCGGCTGAGCCCTGGTATTGAAGAACACGACTTCAATACAAA    350

BSNT_04214___    291 ATTGCGCAATGCGATTAAATTCCTTGAAAAAGGCGATAAAGTGAAAGCTT    340
                     ..|.|||||.||.||.||.|||||..|||||||.||.|||||||||||.|
BL00357___inf    351 GCTTCGCAACGCCATCAAGTTCCTGCAAAAAGGGGACAAAGTGAAAGCGT    400

BSNT_04214___    341 CTATCCGCTTTAAAGGACGCGCAATCACTCATAAAGAAATCGGTCAGCGT    390
                     |.||||||||||||||.||.||.|||||.||||||||||||||.|||||.
BL00357___inf    401 CCATCCGCTTTAAAGGCCGTGCGATCACGCATAAAGAAATCGGGCAGCGC    450

BSNT_04214___    391 GTATTAGACCGTTTCTCCGAAGCATGTGCTGAGGTTGCGACAGTCGAAAC    440
                     ||..|.||||||||.||.|||||.||.||.||.||.|||||.||.|||||
BL00357___inf    451 GTGCTGGACCGTTTTTCAGAAGCCTGCGCGGAAGTGGCGACTGTTGAAAC    500

BSNT_04214___    441 AAAACCAAAAATGGACGGCCGCAGCATGTTCTTAATGCTCGCACCGAAAA    490
                     .||.||.||||||||||||||||||||||||.|..|||||||.||.||||
BL00357___inf    501 GAAGCCGAAAATGGACGGCCGCAGCATGTTCCTGGTGCTCGCGCCTAAAA    550

BSNT_04214___    491 ACGAAAAGCAATAA    504
                     ..||||||.||   
BL00357___inf    551 CTGAAAAGTAA---    561


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