Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04211 and BL00356
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence dna-align/BSNT_04211___rplT.1.5803.seq
# -bsequence dna-align/BL00356___rplT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04211___rplT-BL00356___rplT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04211___rplT-BL00356___rplT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04211___rplT
# 2: BL00356___rplT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity: 330/360 (91.7%)
# Similarity: 330/360 (91.7%)
# Gaps: 0/360 ( 0.0%)
# Score: 1530.0
#
#
#=======================================
BSNT_04211___ 1 ATGCCAAGAGTAAAAGGCGGAACTGTTACACGTAAGCGTCGTAAAAAGGT 50
||||||||||||||||||||||||||||||||.||.||||||||||||||
BL00356___rpl 1 ATGCCAAGAGTAAAAGGCGGAACTGTTACACGCAAACGTCGTAAAAAGGT 50
BSNT_04211___ 51 TCTTAAATTAGCAAAAGGTTATTTCGGTTCAAAACATACATTATACAAAG 100
|||.||||||||||||||||||||.||||||||||||||||||||.||||
BL00356___rpl 51 TCTCAAATTAGCAAAAGGTTATTTTGGTTCAAAACATACATTATATAAAG 100
BSNT_04211___ 101 TAGCTAACCAGCAGGTCATGAAATCTGGAAACTATGCTTTCCGTGACCGT 150
||||||||||||||||.||||||||.||||||||.||||||||.||||||
BL00356___rpl 101 TAGCTAACCAGCAGGTTATGAAATCAGGAAACTACGCTTTCCGCGACCGT 150
BSNT_04211___ 151 CGTCAGAAAAAACGTGATTTCCGTAAACTTTGGATCACTCGTATCAACGC 200
|||||||||||.||.||||||||.|||||||||||||||||||||||.||
BL00356___rpl 151 CGTCAGAAAAAGCGCGATTTCCGCAAACTTTGGATCACTCGTATCAATGC 200
BSNT_04211___ 201 AGCTGCTCGCATGAACGGCCTTTCTTACAGCCGTTTAATGCACGGTCTTA 250
.||.||.|||||||||||.|||||||||||||||||||||||||||||||
BL00356___rpl 201 TGCAGCGCGCATGAACGGTCTTTCTTACAGCCGTTTAATGCACGGTCTTA 250
BSNT_04211___ 251 AGCTTTCTGGTATCGAAGTAAACCGTAAAATGCTTGCTGATCTTGCTGTA 300
|||||||.|||||||||||||||||.||||||||||||||.|||||||||
BL00356___rpl 251 AGCTTTCCGGTATCGAAGTAAACCGCAAAATGCTTGCTGACCTTGCTGTA 300
BSNT_04211___ 301 AACGATCTTACTGCATTCAACCAGCTTGCTGATGCTGCTAAAGCTCAATT 350
||||||||.|..||||||||.||||||||.||.|||||||||||.|||||
BL00356___rpl 301 AACGATCTGAACGCATTCAATCAGCTTGCAGACGCTGCTAAAGCGCAATT 350
BSNT_04211___ 351 AAACAAGTAA 360
.||.||.|||
BL00356___rpl 351 GAATAAATAA 360
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