Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04200 and BL00350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence dna-align/BSNT_04200___araD.1.5803.seq
# -bsequence dna-align/BL00350___sgaE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04200___araD-BL00350___sgaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04200___araD-BL00350___sgaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04200___araD
# 2: BL00350___sgaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 714
# Identity: 490/714 (68.6%)
# Similarity: 490/714 (68.6%)
# Gaps: 51/714 ( 7.1%)
# Score: 1600.0
#
#
#=======================================
BSNT_04200___ 1 ATGCTTGAAACATTAAAAAAAGAAGTGCTGGCTGCCAACCTGAAGCTTCA 50
.||||.|||.|.||.|||.||.||||..|....||.||..||.|||||.|
BL00350___sga 1 GTGCTGGAATCTTTGAAAGAACAAGTATTAAAAGCGAATTTGCAGCTTGA 50
BSNT_04200___ 51 AGAGCATCAGCTGGTAACCTTTACGTGGGGAAATGTCAGCGGCATTGACC 100
|||..|.|.|||.||.||||||||.|||||||||||||||||.|||||||
BL00350___sga 51 AGAATACCGGCTTGTCACCTTTACATGGGGAAATGTCAGCGGTATTGACC 100
BSNT_04200___ 101 GTGAAAAAGAAAG--AATTGTCATCAAACCTAGCGGAGTCGAATACAGCG 148
|.||.|| .||| ..|.||||||||.||.|||||.|||.|||||||||
BL00350___sga 101 GGGAGAA--TAAGCTGGTCGTCATCAAGCCGAGCGGTGTCAAATACAGCG 148
BSNT_04200___ 149 ACCTTACAGCAGATGACTTGGTTGTTTTGAACCTTGATGGAGAGGTCGTC 198
|..|.|.|||.||.||.||.||.|||.||||..|.||.||.|||.|.||.
BL00350___sga 149 ATTTGAAAGCCGAAGATTTAGTGGTTCTGAATATGGACGGCGAGATTGTG 198
BSNT_04200___ 199 GAAGGCTCGCTTAAGCCTTCTTCAGATACACCTACCCATGTTTATCTATA 248
|||||....||.|||||.|||||.|||||.||.||.||..|.|||||.||
BL00350___sga 199 GAAGGGGATCTGAAGCCATCTTCCGATACGCCGACACACCTCTATCTTTA 248
BSNT_04200___ 249 TAAAGCC-----TTTCCGAAT--ATCGGGGGAATTGTCCATACCCATTCC 291
|| |||| ||| |||||.||.||.||||||||.||||||
BL00350___sga 249 -----CCGGCAGTTTC--AATCGATCGGCGGGATCGTCCATACGCATTCC 291
BSNT_04200___ 292 CAATGGGCGACAAGCTGGGCGCAATC-GGGCAGAGACATCCCTCCGTTAG 340
|..|||||||||||||||||.||.|| |||.|| |||||.||..||.|.|
BL00350___sga 292 CCGTGGGCGACAAGCTGGGCTCAGTCAGGGAAG-GACATTCCGTCGCTCG 340
BSNT_04200___ 341 GCACGACCCATGCTGATTATTTTGACAGTGCGATTCCATGTACTCGAGAA 390
|.|||||.|||||.||.||.|...||.|.|..|||||.|||||.||.|||
BL00350___sga 341 GAACGACTCATGCCGACTACTACCACGGCGACATTCCGTGTACACGGGAA 390
BSNT_04200___ 391 ATGTATGATGAAGAAATCATTCATGACTACGAACTGAATACAGGAAAAGT 440
|||.||...||.|||||||....|.|.|||||.|||||||||||||||||
BL00350___sga 391 ATGGATCCCGATGAAATCAGGAGTCAATACGAGCTGAATACAGGAAAAGT 440
BSNT_04200___ 441 CATAGCGGAAACCTTTCAGCATCATAACTACGAACAGGTGCCGGGTGTGC 490
.||.|..||.||.||.|.|||||.|.||..|.....||||||.|..||.|
BL00350___sga 441 GATTGTAGAGACGTTCCGGCATCTTGACCCCCTGGCGGTGCCCGCCGTTC 490
BSNT_04200___ 491 TCGTGAATAATCACGGACCGTTCTGCTGGGGCACTGACGCCTTAAATGCC 540
|||||||.||||||||.|||||.||||||||.|..||||||||||.||||
BL00350___sga 491 TCGTGAACAATCACGGGCCGTTTTGCTGGGGAAAAGACGCCTTAACTGCC 540
BSNT_04200___ 541 ATTCATAACGCAGTTGTATTAGAAACGGTTGCCGAAATGGCCTATCACTC 590
.|.||.||.||.||.||..|.|||...||.|||.|.|||||.||.|.|||
BL00350___sga 541 GTACACAATGCCGTCGTCCTGGAAGAAGTCGCCAAGATGGCGTACCGCTC 590
BSNT_04200___ 591 TATTATGCTGAA---------CAA--GGATGTAACCCCAATCAATACAGT 629
..|.|||||||| .|| |||| || |.||.
BL00350___sga 591 CCTGATGCTGAATCCGTCTCTTAAGCGGAT-TA------------AGAGC 627
BSNT_04200___ 630 CC--TGCATGAAAAGCATTTTTATCGAAAACACGGAGCAAATGCGTATTA 677
.| ||||.||.|||||||.||.||||||.|||||.|||.|.||.|||||
BL00350___sga 628 GCTTTGCAGGATAAGCATTATTTTCGAAAGCACGGGGCAGACGCCTATTA 677
BSNT_04200___ 678 TGGCCAGTCATGA- 690
.|||||.| |
BL00350___sga 678 CGGCCAAT----AG 687
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