Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04197 and BL00348
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence dna-align/BSNT_04197___araN.1.5803.seq
# -bsequence dna-align/BL00348___araN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04197___araN-BL00348___araN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04197___araN-BL00348___araN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04197___araN
# 2: BL00348___araN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1347
# Identity: 972/1347 (72.2%)
# Similarity: 972/1347 (72.2%)
# Gaps: 87/1347 ( 6.5%)
# Score: 3379.5
#
#
#=======================================
BSNT_04197___ 1 ATGAAAAAAATGACTGTCTGTTTTCTTGCGCTCATGATGCTGCTTACATT 50
.|||||| |.||.||| |||| ||..|.||
BL00348___ara 1 GTGAAAA------------GGTTCCTT----TCAT-------CTATCTTT 27
BSNT_04197___ 51 A--GTCA--------------TTGC------CGGGTGTTCAGCAGAAAAA 78
| |||| |||| |||| ||.|| ||...|.
BL00348___ara 28 ATGGTCACGGTCGCTGTATGTTTGCTTTTATCGGG-GTGCA--AGGCGAG 74
BSNT_04197___ 79 T----CATCCGGCAAATCGGGTGAAACTGAGCTGACCTTTTGGACATTTA 124
| |.||||...||.|||..|..||.||.|||||.|||||||||||.|
BL00348___ara 75 TCCTGCCTCCGATCAAGCGGACGGCACCGAACTGACATTTTGGACATTCA 124
BSNT_04197___ 125 ACGGGCTTCATGAGCAGTTCTATGTAGAAATGGTGAAGGAATGGAATAAA 174
||||.||||||||.|||||.||||..||.||||||||.||||||||.|||
BL00348___ara 125 ACGGCCTTCATGAACAGTTTTATGCTGAGATGGTGAAAGAATGGAACAAA 174
BSNT_04197___ 175 AAATATCCTGACCGCAAAATTAAGCTGAATACGGTCGTTTATCCGTATGG 224
||.|||||.||.||.|||||.||..|.|||||.||.||.|||||||||||
BL00348___ara 175 AAGTATCCCGAGCGAAAAATCAAATTAAATACAGTGGTGTATCCGTATGG 224
BSNT_04197___ 225 ACAAATGCACGATAACTTGTCGATCTC-CTTAATAG-CGGGAGAAGGCGT 272
|||.|||||.||.||.||.||.||||| ||| .||| ||||| ||||.||
BL00348___ara 225 ACAGATGCATGACAATTTATCTATCTCGCTT-TTAGCCGGGA-AAGGGGT 272
BSNT_04197___ 273 CCCTGATATTGCCGATGTCGAATTGGCCCGTTTTTCAAACTTTTTGAAGG 322
.||.||||||||||||||.||..|||..||.|.|||.|||||||||||||
BL00348___ara 273 TCCAGATATTGCCGATGTTGAGCTGGGGCGCTATTCGAACTTTTTGAAGG 322
BSNT_04197___ 323 TCTCTGACATACCGCTTGCCGATTTGACTCCGCTGATTGAAAAGGACCGC 372
.|||||||||.||.|||.|||||||.||.|||||..|.||..|.||.|||
BL00348___ara 323 GCTCTGACATTCCTCTTACCGATTTAACGCCGCTTGTGGAGGACGAACGC 372
BSNT_04197___ 373 GATAAATTCGTTGAGGCGCGGCTGACCCTGTACAGCAAAAACGGCAAGCT 422
||.||.||.|||||.|||.|||||||.||.||||||||.|||||||||||
BL00348___ara 373 GACAAGTTTGTTGAAGCGAGGCTGACGCTCTACAGCAAGAACGGCAAGCT 422
BSNT_04197___ 423 TTACGGACTCGATACGCATGTAGGAACAACAGTCATGTTTTATAACATGG 472
|||||||||.||.||.|||||.|||||.||.||.||||.|||.|||||||
BL00348___ara 423 TTACGGACTTGACACACATGTCGGAACTACCGTGATGTATTACAACATGG 472
BSNT_04197___ 473 ATGTGATGAAGAAAGCCGGCGTCAATCCTGACGATATTAAAACATGGGAT 522
|..|||||||.|||||.|||||..||||.|||||.||.|||||||||||.
BL00348___ara 473 AAATGATGAATAAAGCAGGCGTTGATCCGGACGACATCAAAACATGGGAA 522
BSNT_04197___ 523 GATTACCATAAAGCCGGACAGAAAGTGCG-CAAAGTGACCGGGAAGCCGA 571
||||||....||| |||.||.||||..|| |||||....|||.|||||||
BL00348___ara 523 GATTACAGGGAAG-CGGGCAAAAAGGTCGTCAAAGCTCTCGGAAAGCCGA 571
BSNT_04197___ 572 TGGGAACGGTAGAAACAAATGATTCCGGAACGTTCTTATCT----ATGAT 617
||...|||.|.|||||.|..|| ||.||| |||.|.||| .||.|
BL00348___ara 572 TGACGACGATTGAAACGACCGA--CCCGAA--TTCATTTCTGCCGCTGGT 617
BSNT_04197___ 618 TTCACAGCAAAACTCAGGTTATTTTGATAAAAACGGCAAGCTGATCCTCA 667
|||.|||||....||.|||||.||||||.|..|.||...|.|||...|.|
BL00348___ara 618 TTCCCAGCAGGGATCCGGTTACTTTGATGAGCAGGGGCGGTTGACATTAA 667
BSNT_04197___ 668 ATAATGACACCAACGTCAAAACACTTCAATATTTAAAAGACATGATCAAT 717
|.|||||.||.|||||.|||||.||..||| |||.||||||.| |.|.|
BL00348___ara 668 ACAATGAGACAAACGTGAAAACGCTCGAAT-TTTTAAAGACTT--TAATT 714
BSNT_04197___ 718 GATAAA-ACGATGATTCCTG------CGCCGGGCGGCGGGCATCACAGTG 760
||.||| || |..|||.|.| ||||.||.|||...||||||||||
BL00348___ara 715 GAGAAAGAC-AAAATTGCCGTCACAACGCCCGGAGGCAATCATCACAGTG 763
BSNT_04197___ 761 AAGAATACTACGGCTTTATGAACCAAGGAGGAGCTGCTTCAGTCCTCATG 810
||||.||.|||||.||||||||||||||.||.||.||.||.|||.|.|||
BL00348___ara 764 AAGAGTATTACGGATTTATGAACCAAGGCGGCGCGGCGTCTGTCTTAATG 813
BSNT_04197___ 811 CCGATTTGGTATATGGGAAGATTTATCGACTATATGCCTGATCTGAAAGG 860
|||||.|||||||||||..|.|||.|.||.|||||||||||..|||||||
BL00348___ara 814 CCGATCTGGTATATGGGCCGTTTTTTGGATTATATGCCTGACTTGAAAGG 863
BSNT_04197___ 861 GAAAATTGCCATCAGGCCGCTCCCGGCATGGAAAGAGGGAGGCGACCGCT 910
||||||.||.|||||.|||||.|||||||||.||||.||.||.|||||||
BL00348___ara 864 GAAAATCGCGATCAGACCGCTGCCGGCATGGGAAGAAGGGGGAGACCGCT 913
BSNT_04197___ 911 CGGCAGGTTTGGGCGGTACGGCAACTGTTGTGCCGAAACAAGCCAAGCAT 960
|.||.||..|||||||.|||||.||.||..|.||.|||||.||.||.||.
BL00348___ara 914 CAGCGGGAATGGGCGGAACGGCCACCGTGATTCCAAAACAGGCGAAACAG 963
BSNT_04197___ 961 GTTGAGTTAGCAAAAGAGTTTTTAGCCTTTGCGAAGGGCTCTAAAGAAGG 1010
||.||..|.||.||.||.||.||....|||||.||.|..||.||||||||
BL00348___ara 964 GTCGATCTGGCCAAGGATTTCTTGAAATTTGCCAAAGCGTCAAAAGAAGG 1013
BSNT_04197___ 1011 AAACAAAAAGCTCTGGAGCGTACTAGGGTTTGACCCGCTTCGCTGGGATG 1060
.||||..|||||.||||.|||.||.|||||.||.|||||..|.|||||||
BL00348___ara 1014 CAACATCAAGCTGTGGACCGTGCTCGGGTTCGATCCGCTCAGATGGGATG 1063
BSNT_04197___ 1061 TCTGGAGCTCCAAGGAATTGAAAGAGA--AAAACAAGTACACGGATTACT 1108
|.|||..|||..|.||||||||| |.| |||.||| ||.||.||.||||
BL00348___ara 1064 TGTGGGACTCGGACGAATTGAAA-AAACCAAATCAA-TATACAGAATACT 1111
BSNT_04197___ 1109 TCCAAAACGG--AACAGGCATTTTTTCCGTGCTGCTCGATATCAAGGATG 1156
|.|||||||| |||| |||.|||||||||||.||.||.||.|||||||
BL00348___ara 1112 TTCAAAACGGACAACA--CATCTTTTCCGTGCTTCTTGACATAAAGGATG 1159
BSNT_04197___ 1157 AAATCAATCCAATTTA-TTTACATGAGGATTTTGCCAAGGCTTCAGACCT 1205
|.||||||||..|||| .|||| ||||||||.|||.|||.||||.||.||
BL00348___ara 1160 AGATCAATCCGCTTTACCTTAC-TGAGGATTATGCGAAGACTTCCGATCT 1208
BSNT_04197___ 1206 TGTCAACAGAAGCGTATTGTTCGACGCGCTTAAATCTCAGCAAAAAACGC 1255
.||||||||||.|.||.|||.|||.|||||.|||.|..||...|||||.|
BL00348___ara 1209 CGTCAACAGAAACATACTGTACGAAGCGCTCAAAACGAAGAGCAAAACAC 1258
BSNT_04197___ 1256 CTAAACAAGCCTTGGACAGAGCGGCAGGTGAACTGAAACAGAAATAG 1302
|.|||.||||.|||||||.|||.||||.||||.|||||..|.|||||
BL00348___ara 1259 CGAAAGAAGCATTGGACAAAGCAGCAGCTGAAGTGAAAGGGCAATAG 1305
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