Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04196 and BL00347
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence dna-align/BSNT_04196___araP.1.5803.seq
# -bsequence dna-align/BL00347___araP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04196___araP-BL00347___araP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04196___araP-BL00347___araP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04196___araP
# 2: BL00347___araP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 963
# Identity: 705/963 (73.2%)
# Similarity: 705/963 (73.2%)
# Gaps: 39/963 ( 4.0%)
# Score: 2526.5
#
#
#=======================================
BSNT_04196___ 1 ATGAAACCTGTGAAAACGGGAACGGTTCATCCCGTTCC----TTCAGCTG 46
.||||..||||.|||||.|..||.||.|||.|..|||| .|.|||.|
BL00347___ara 1 TTGAAGACTGTTAAAACAGATACAGTGCATTCGTTTCCGCCGGTGAGCAG 50
BSNT_04196___ 47 CGAAACA---ATCAGGCTGGCGAGATGTATTTTATTCGAAAAAAGCGGCG 93
..|||.| |||| ||..|.||||.|||||...||||||.||.
BL00347___ara 51 AAAAAGAAAGATCA-------GACGTTTATTATATTCAGCAAAAGCCGCA 93
BSNT_04196___ 94 CCCTATCTGTTTACAGCGCCATTCGTTTTATCCTTTCTCGTATTTTTTCT 143
|||||..|.||||||||.||.||.||..|.||||||..|.||||||||||
BL00347___ara 94 CCCTACATTTTTACAGCACCTTTTGTACTCTCCTTTTGCATATTTTTTCT 143
BSNT_04196___ 144 ATACCCCATCATTAGTGTCTTCATCATGAGCTTTCAAAGAATATTGCCGG 193
.||.||..|.||.||.|||.||||||||||.||||||||.||..|.||.|
BL00347___ara 144 TTATCCGCTTATCAGCGTCGTCATCATGAGTTTTCAAAGCATTCTCCCCG 193
BSNT_04196___ 194 GAGAGGTGTCCTTTGTCGGTTTGTCTAATTATACAGCGCTAAACAACCCG 243
|.||.||...|||..||||...|...||.||||.|||..|||||||.||.
BL00347___ara 194 GGGAAGTCCGCTTCATCGGGACGGAGAACTATAAAGCATTAAACAATCCT 243
BSNT_04196___ 244 ACGTTCTATACCGCCCTTTGGAATACGCTGGAATACACCTTTTGGACGCT 293
||.||.||||||||.||.|..||.||..|..||||||||||||||||
BL00347___ara 244 ACATTTTATACCGCACTATTCAACACCGTAAAATACACCTTTTGGAC--- 290
BSNT_04196___ 294 GATCGTGCTGATT------CCTGTCCCATTGCTTCTGGCCATATTCCTGA 337
|| |||||||| |||||.||..|..|||||||..|.||..|..
BL00347___ara 291 -AT--TGCTGATTTTAATACCTGTTCCTCTTATTCTGGCAGTCTTTTTAG 337
BSNT_04196___ 338 ATTCAAAGCTGGTCAAATTTAGAAATATATTTAAATCAGCACTATTTATC 387
||||.||.||.||.||.||||.|||..|.||.|||||.||..||||.|||
BL00347___ara 338 ATTCTAAACTCGTAAAGTTTAAAAACGTGTTCAAATCGGCTTTATTCATC 387
BSNT_04196___ 388 CCGGCATTGACCTCAACCATTGTCGCGGGGATCATTTTTCGGCTGATCTT 437
|||||..||||.|||||||||||.||||||||.|||||..|||||||.||
BL00347___ara 388 CCGGCTCTGACTTCAACCATTGTGGCGGGGATTATTTTCAGGCTGATTTT 437
BSNT_04196___ 438 CGGAGAAATGGAAACGTCTCTGGCCAATTCCATCCT-ACTCAAACTCGGC 486
.|||||||||||.||.||.|||||.|||||.||..| .|| ||.|||||.
BL00347___ara 438 TGGAGAAATGGATACATCCCTGGCGAATTCGATATTGGCT-AAGCTCGGA 486
BSNT_04196___ 487 TTTTCACCTCAGAACTGGATGAACAATGAACATACCGGCATGTTTTTGAT 536
..|||.||..|.||||||.||||||||||||||||||||||||||||.||
BL00347___ara 487 GGTTCGCCGTACAACTGGCTGAACAATGAACATACCGGCATGTTTTTAAT 536
BSNT_04196___ 537 GGTGCTGCTTGCTTCATGGAGATGGATGGGAATCAACATCCTTTACTTTT 586
||||.||||.||.||.||||||||||||||.|||||..||||.|||||||
BL00347___ara 537 GGTGATGCTCGCATCTTGGAGATGGATGGGGATCAATGTCCTGTACTTTT 586
BSNT_04196___ 587 TAGCCGGTTTGCAAAATGTGCCGAAAGAGCTGTACGAAGCCGCTGATATA 636
|.||.||.|||||.||.||.||||||||..||||.|||||.||.||.||.
BL00347___ara 587 TGGCGGGCTTGCAGAACGTTCCGAAAGAATTGTATGAAGCTGCCGAAATC 636
BSNT_04196___ 637 GACGGCGCGAATACAATGAAAAAATTTCTGCACATCACGCTGCCGTTTCT 686
|||||.||....||..|.||.||.|||...||.||.|||||.||||||.|
BL00347___ara 637 GACGGGGCAGGCACGTTCAAGAAGTTTTACCATATTACGCTTCCGTTTTT 686
BSNT_04196___ 687 CAAGCCTGTAACCGTATATGTGCTGACCATCAGCATTATCGGCGGCTTCA 736
.|||||.||.|.|||.||.||||||||.||||||||.||||||||||||.
BL00347___ara 687 AAAGCCCGTCAGCGTCTACGTGCTGACGATCAGCATCATCGGCGGCTTCC 736
BSNT_04196___ 737 GGATGTTTGAGGAAAGCTACGTCCTTTGGCAGAATAATTCCCCGGGTAAT 786
||||||||||.|||||||||||.||.||||||||.||.||.|||||.||.
BL00347___ara 737 GGATGTTTGAAGAAAGCTACGTGCTGTGGCAGAACAACTCTCCGGGCAAC 786
BSNT_04196___ 787 ATTGGTCTGACGCTTGTTGGATATTTGTATCAGCAGGGGCTTGCCTACAA 836
||.||.||||||.|.||.|||||..|.|||||||||||||||||||||||
BL00347___ara 787 ATCGGCCTGACGATGGTCGGATACATTTATCAGCAGGGGCTTGCCTACAA 836
BSNT_04196___ 837 CGAAATGGGGTACGGAGCAGCCATCGGCATCGTGCTTTTGATTGTGATCC 886
|.|.|||||.||||||.|.||..|||||||||||||.|||| |.|||.
BL00347___ara 837 CAACATGGGCTACGGATCGGCGCTCGGCATCGTGCTCTTGA---TCATCA 883
BSNT_04196___ 887 TTGT----TGTCAGCCTGATTTCATTAAAGCTGTCAGGCTCGTTTAAGGG 932
||.| || ||||||.|||||||||||||||||.||.||.|||||...
BL00347___ara 884 TTTTCATCTG-CAGCCTCATTTCATTAAAGCTGTCTGGATCTTTTAAAAA 932
BSNT_04196___ 933 GGAGGGATAA--- 942
||||||.||.
BL00347___ara 933 GGAGGGCTATTAA 945
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