Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04180 and BL00340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:15
# Commandline: needle
# -asequence dna-align/BSNT_04180___pheS.1.5803.seq
# -bsequence dna-align/BL00340___pheS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04180___pheS-BL00340___pheS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04180___pheS-BL00340___pheS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04180___pheS
# 2: BL00340___pheS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1047
# Identity: 821/1047 (78.4%)
# Similarity: 821/1047 (78.4%)
# Gaps: 24/1047 ( 2.3%)
# Score: 3171.0
#
#
#=======================================
BSNT_04180___ 1 ATGGAAGAAAAGCTAAAACAGCTGGAACAAGAAGCTTTAGAACAAGTAGA 50
|||.|.|||.||||.||||.|||.|||.|||||||..|.|||.||||.||
BL00340___phe 1 ATGCAGGAAGAGCTGAAACGGCTTGAAAAAGAAGCGGTTGAAAAAGTGGA 50
BSNT_04180___ 51 AGCGGCAAGCTCATTGAAGGTTGTCAATGATATTCG-GGTGCAATATCTC 99
|||.||..|.|||||.||.|..|||||.|||.|.|| |.||| .|||||.
BL00340___phe 51 AGCCGCTGGTTCATTAAAAGAAGTCAACGATGTCCGCGTTGC-GTATCTG 99
BSNT_04180___ 100 GGAAAAAAAGGGCCGATTACAGAAGTGCTGCGCGGAATGGGCAAGCTTTC 149
||||||||.||.|||||.|||||||||||.||.||||||||.|||||.||
BL00340___phe 100 GGAAAAAAGGGACCGATCACAGAAGTGCTTCGGGGAATGGGAAAGCTGTC 149
BSNT_04180___ 150 TGCTGAGGAACGTCCAAAAATGGGGGCCCTCGCGAACGAAGTAAGGGAGC 199
.|||||.|||.|.||.||||||||||||.|.||||||||||||||.|||.
BL00340___phe 150 CGCTGAAGAAAGGCCGAAAATGGGGGCCTTGGCGAACGAAGTAAGAGAGA 199
BSNT_04180___ 200 GTATTGCCAATGCGATTGCTGACAAAAA----CGAGAAGCTTGAAGAAGA 245
..||.|||...|||||.||.||.||||| || .|||||.|||||
BL00340___phe 200 AAATCGCCGCGGCGATCGCCGAAAAAAATGCCCG----CCTTGAGGAAGA 245
BSNT_04180___ 246 GGAAATGAAACAGAAGCTTGCAGGA-CAGACAATTGACGTCACGCTGCCG 294
.||..|||||..||||| ||.|.|| |||||.||||||||.|||||.|||
BL00340___phe 246 AGAGGTGAAAAGGAAGC-TGAAAGAGCAGACGATTGACGTGACGCTTCCG 294
BSNT_04180___ 295 GGGAACCCTGTTG----CAGTCG-GCGGCCGCCATCCGCTCACTGTTGTC 339
||.|.||||| || |||..| |||| ||||||||.||..|.||.
BL00340___phe 295 GGAAGCCCTG-TGAAAACAGGAGCGCGG----CATCCGCTGACGATCGTT 339
BSNT_04180___ 340 ATTGAAGAAATTGAAGATTTATTTATCGGTATGGGCTACACAGTCGAGGA 389
|||||||||||.|||||.||.||||||.|.|||||.||..|.||.||.||
BL00340___phe 340 ATTGAAGAAATCGAAGACTTGTTTATCAGCATGGGATATTCGGTGGAAGA 389
BSNT_04180___ 390 AGGGCCAGAGGTTGAAACGGATTACTACAACTTCGAATCGCTCAATCTTC 439
.|||||.||.||.|||||.||.||.||.|||||||||.|||||||.||||
BL00340___phe 390 GGGGCCTGAAGTGGAAACCGACTATTATAACTTCGAAGCGCTCAACCTTC 439
BSNT_04180___ 440 CGAAAGAACACCCTGCGCGCGATATGCAGGACAGCTTTTACATCACAGAG 489
|||||||.|||||.||.||.||||||||.|||||||||||.||.||.||.
BL00340___phe 440 CGAAAGAGCACCCGGCCCGGGATATGCAAGACAGCTTTTATATTACGGAA 489
BSNT_04180___ 490 GAAACTTTGATGAGAACGCAAACTTCTCCTGTCCAAACACGGACGATGGA 539
||.||..||||||||||.||.||.||||||||.||.||.||.||||||||
BL00340___phe 490 GATACGCTGATGAGAACACAGACATCTCCTGTTCAGACGCGCACGATGGA 539
BSNT_04180___ 540 AAAGCATAAAGGCAAAGGTCCCGTTAAAATCATTTGCCCGGGTAAAGTAT 589
|||.||||||||||||||.||.||.||||||||.|||||.||.|||||.|
BL00340___phe 540 AAAACATAAAGGCAAAGGCCCTGTCAAAATCATCTGCCCCGGCAAAGTGT 589
BSNT_04180___ 590 ATCGCCGTGATAACGATGATGCGACGCACTCTCACCAATTTATGCAAATT 639
|.|||||.||.||||||||||||||.||.||.||.||.||||||||.|||
BL00340___phe 590 ACCGCCGCGACAACGATGATGCGACACATTCCCATCAGTTTATGCAGATT 639
BSNT_04180___ 640 GAAGGGCT-TGTCGTTGACAAAAACATCAGCATGAGTGATTTAAAAGGAA 688
|||||||| || |||||||....|.|||||||||||.||.||||||||||
BL00340___phe 640 GAAGGGCTCTG-CGTTGACCGTGATATCAGCATGAGCGACTTAAAAGGAA 688
BSNT_04180___ 689 CGCTTGAACTCGTTGCGAAAAAAATGTTCGGGCAAGACCGTGAAATCAGA 738
|.||.|||...||.||||||||.||||||||..||||.||.|||||||||
BL00340___phe 689 CCCTGGAAACGGTCGCGAAAAAGATGTTCGGCGAAGAGCGCGAAATCAGA 738
BSNT_04180___ 739 CTCCGCCCAAGCTTCTTCCCGTTTACTGAGCCTTCAGTAGAAGTGGATGT 788
||.||.||||||||||||||||||||.|||||.||.||.|||||.|||||
BL00340___phe 739 CTGCGTCCAAGCTTCTTCCCGTTTACAGAGCCGTCTGTCGAAGTCGATGT 788
BSNT_04180___ 789 GACATGCTTTAAATGTGGTGGAAACGGCTGCTCAGTATGTAAAGGAACAG 838
..|.|||||||||||.||.||.||.||||||||.||.||||||..|||.|
BL00340___phe 789 TTCCTGCTTTAAATGCGGAGGCAAAGGCTGCTCCGTTTGTAAACAAACGG 838
BSNT_04180___ 839 GCTGGATTGAAATCCTCGGTGCCGGAATGGTTCACCCGAACGTGCTTAAA 888
|||||||.|||||.|||||.|||||||||||.||.|||||||||||..||
BL00340___phe 839 GCTGGATCGAAATTCTCGGCGCCGGAATGGTGCATCCGAACGTGCTCGAA 888
BSNT_04180___ 889 ATGGCTGGCTTTGATCCGAAGGAATATCAGGGCTTCGCATTCGGAATGGG 938
|||||.||.||.|||.|.||..||||||||||.||.||.||.||.|||||
BL00340___phe 889 ATGGCCGGATTCGATTCCAAACAATATCAGGGATTTGCTTTTGGGATGGG 938
BSNT_04180___ 939 TGTTGAGCGCATCGCGATGCTGAAATACGGCATTGATGATATCCGCCACT 988
.|||||.||.|||||.||||||||.|||||||||||.||.||.||.||.|
BL00340___phe 939 CGTTGAACGGATCGCAATGCTGAAGTACGGCATTGACGACATTCGTCATT 988
BSNT_04180___ 989 TCTATACAAACGATGTCAGATTTATTTCGCAGTTTAAACAGGCGTAA 1035
|||||||.|||||||||||||||.|.||.||.||||||||.||.|||
BL00340___phe 989 TCTATACGAACGATGTCAGATTTTTATCTCAATTTAAACAAGCTTAA 1035
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