Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04162 and BL00327

See Amino acid alignment / Visit BSNT_04162 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:13
# Commandline: needle
#    -asequence dna-align/BSNT_04162___etfA.1.5803.seq
#    -bsequence dna-align/BL00327___etfA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04162___etfA-BL00327___etfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04162___etfA-BL00327___etfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04162___etfA
# 2: BL00327___etfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1005
# Identity:     713/1005 (70.9%)
# Similarity:   713/1005 (70.9%)
# Gaps:          54/1005 ( 5.4%)
# Score: 2358.0
# 
#
#=======================================

BSNT_04162___      1 ATGGGAAAAAAAGTGATCGTGCTTGGAGAAATACGCGATGGGGAATTGCG     50
                     |||.|.||||||||.|||||..|.|||||..|..|.||.||....|||.|
BL00327___etf      1 ATGAGCAAAAAAGTTATCGTATTGGGAGAGTTCAGAGACGGTTCGTTGAG     50

BSNT_04162___     51 GAATGTCACCTTTGAAGCAATAGCTGCAGGAAGAACCATTTCAGGAGATG    100
                     ||||||.||.||.|||||.|||||.|||||||.|||..||.|.|.||..|
BL00327___etf     51 GAATGTGACTTTCGAAGCGATAGCCGCAGGAAAAACGGTTGCCGAAGGGG    100

BSNT_04162___    101 GGGAAGTCATCGGTGTTCTCATCGGTGAAAATG-TACAAAGCATTGCACA    149
                     |.||.||.|||||.||.||..|||||||||..| |.|||..|| |||...
BL00327___etf    101 GAGAGGTGATCGGCGTACTGTTCGGTGAAAGCGTTTCAAGTCA-TGCGGC    149

BSNT_04162___    150 AGAGCTTATTCATTACGGAGCAGATAAAGTTCTTACCGCTGAGGACCCGA    199
                     |||.||.||.||||||||.||.||.|.|||.|||||.||.||..|||||.
BL00327___etf    150 AGAACTGATCCATTACGGCGCTGACAGAGTGCTTACAGCCGAAAACCCGC    199

BSNT_04162___    200 AGCTGAAAACATACACGGCAGACGGGTACAGCCAGGTCATGAGAGGTGTT    249
                     ...||||||..||.|||.|.|||||.||     .|.|||  ||...||||
BL00327___etf    200 TCTTGAAAAACTATACGTCTGACGGCTA-----TGTTCA--AGCCTTGTT    242

BSNT_04162___    250 ATCGAGCA-AGAA------AATCCTGA-TTCAGTCATCTTCGGGCATACG    291
                     ..|||.|| ||||      |||||.|| .||| ||||.|||||.||||||
BL00327___etf    243 GCCGATCATAGAACGCGAGAATCCGGACGTCA-TCATTTTCGGACATACG    291

BSNT_04162___    292 GCAATGGGCAAGGATCTT-TCACCGAAGCTTGCTGCCCGGCTGCAAACAG    340
                     .|||||||.||.|| ||| ||.|||||||||.|.|||||..||..|||||
BL00327___etf    292 TCAATGGGAAAAGA-CTTGTCGCCGAAGCTTTCAGCCCGTATGGGAACAG    340

BSNT_04162___    341 GCTTAATTTCTGATGCTATAGATGT--AAGCGTTACCGGAGGGAATGTTG    388
                     |..|.||.||.|||||..|.|||||  ||  ||..||||.||.||..|.|
BL00327___etf    341 GGCTGATATCGGATGCCGTCGATGTCGAA--GTGGCCGGCGGCAACATCG    388

BSNT_04162___    389 TGTTCACACGGCCGATTTACTCGGGGAAAGCTTTTGAACGCGTCATTTC-    437
                     ||||.|||.||||||||||||||||.|||||.||||||||..||||||| 
BL00327___etf    389 TGTTTACAAGGCCGATTTACTCGGGCAAAGCGTTTGAACGGATCATTTCC    438

BSNT_04162___    438 -AACCGATCCGATGATCTTTGCAACAATTCGCCCCAATAACAT--TCAAG    484
                      ||  |||...|.|||.||||||||.||..|.||.|||||.||  .|..|
BL00327___etf    439 GAA--GATGAAACGATTTTTGCAACGATCAGACCGAATAATATCGCCCCG    486

BSNT_04162___    485 CTTCAGAAAAA---------GACATCAGCAGATCGGGAAGCATCGAAAGC    525
                     |||.|.|||.|         ||||..||| |.|| |.|||||||| ||||
BL00327___etf    487 CTTGACAAAGATGAGACGCGGACAGGAGC-GGTC-GAAAGCATCG-AAGC    533

BSNT_04162___    526 ATAAATGTCTCTCTTACTGACCTTCGCACCGTGATTCAA-GAGGTCGTCA    574
                     |.|        |.||...|||.|..|.||.||.| |||| ||..|.||||
BL00327___etf    534 AGA--------TATTCGGGACATCAGAACGGTCA-TCAAGGACATTGTCA    574

BSNT_04162___    575 AAAAAACAGCTGACGGTGTTGATCTCTCCGAAGCGAAAATTATCGTTGCG    624
                     |||||||..|.||.||.||.|||.|.||.|||||||||||||||||.||.
BL00327___etf    575 AAAAAACGTCCGAAGGCGTCGATTTGTCTGAAGCGAAAATTATCGTAGCC    624

BSNT_04162___    625 GGCGGCCGAGGAGTCAAAAGTAAGGAAGGATTTCAGCCGCTGCAGGAGCT    674
                     |||||.||.||.||||||||..|||||||.|||.|.||||||||||||||
BL00327___etf    625 GGCGGTCGCGGCGTCAAAAGCGAGGAAGGCTTTAAACCGCTGCAGGAGCT    674

BSNT_04162___    675 TGCAGAGGTGCTAGGGGCCGCAGTCGGGGCTTCTCGCGGGGCATGTGACG    724
                     .||.||.||..|.||.|..||.|||||.|||||..|.||.||.|||||||
BL00327___etf    675 CGCCGATGTATTGGGCGGGGCGGTCGGCGCTTCAAGGGGAGCCTGTGACG    724

BSNT_04162___    725 CTGATTATTGCGATTATGCTCTCCAAATCGGGCAGACCGGGAAAGTCGTT    774
                     |.||.||.|||||.|||.|.||.||||||||.||||||||.|||||.||.
BL00327___etf    725 CAGACTACTGCGACTATTCGCTTCAAATCGGCCAGACCGGCAAAGTTGTG    774

BSNT_04162___    775 ACTCCGGATTTGTACATTGCATGCGGCATTTCCGGCGCCATCCAGCATTT    824
                     ||.||.||.||.||.|||||.|||||||||||.||.||.||.|||||..|
BL00327___etf    775 ACACCTGACTTATATATTGCCTGCGGCATTTCAGGAGCGATTCAGCACCT    824

BSNT_04162___    825 GGCCGGCATGTCAAACAGCAAGGTGATCGTCGCCATCAATAAAGACCCCG    874
                     .||.||.||||||||||||||..|.|||||.||||||||.|||||.||.|
BL00327___etf    825 CGCAGGGATGTCAAACAGCAAAATCATCGTTGCCATCAACAAAGATCCGG    874

BSNT_04162___    875 AAGCCGATATCTTTAAAATAGCGGATTACGGCATCGTCGGTGATTTATTT    924
                     ||||.|||||.||||||||.||.||.|||||.||||||||.||.||||||
BL00327___etf    875 AAGCTGATATATTTAAAATTGCCGACTACGGGATCGTCGGCGACTTATTT    924

BSNT_04162___    925 GAAGTTGTCCCGTTATTAACTGAGGAATTCAAACAATTGAATATACA-CT    973
                     |||.|.||.|||.|..|.||.||||||||.|||.|..|||...| || |.
BL00327___etf    925 GAAATCGTTCCGCTGCTCACGGAGGAATTTAAAAAGCTGAGCGT-CAGCA    973

BSNT_04162___    974 CATAA    978
                     |||.|
BL00327___etf    974 CATGA    978


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