Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04162 and BL00327
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_04162___etfA.1.5803.seq
# -bsequence dna-align/BL00327___etfA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04162___etfA-BL00327___etfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04162___etfA-BL00327___etfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04162___etfA
# 2: BL00327___etfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1005
# Identity: 713/1005 (70.9%)
# Similarity: 713/1005 (70.9%)
# Gaps: 54/1005 ( 5.4%)
# Score: 2358.0
#
#
#=======================================
BSNT_04162___ 1 ATGGGAAAAAAAGTGATCGTGCTTGGAGAAATACGCGATGGGGAATTGCG 50
|||.|.||||||||.|||||..|.|||||..|..|.||.||....|||.|
BL00327___etf 1 ATGAGCAAAAAAGTTATCGTATTGGGAGAGTTCAGAGACGGTTCGTTGAG 50
BSNT_04162___ 51 GAATGTCACCTTTGAAGCAATAGCTGCAGGAAGAACCATTTCAGGAGATG 100
||||||.||.||.|||||.|||||.|||||||.|||..||.|.|.||..|
BL00327___etf 51 GAATGTGACTTTCGAAGCGATAGCCGCAGGAAAAACGGTTGCCGAAGGGG 100
BSNT_04162___ 101 GGGAAGTCATCGGTGTTCTCATCGGTGAAAATG-TACAAAGCATTGCACA 149
|.||.||.|||||.||.||..|||||||||..| |.|||..|| |||...
BL00327___etf 101 GAGAGGTGATCGGCGTACTGTTCGGTGAAAGCGTTTCAAGTCA-TGCGGC 149
BSNT_04162___ 150 AGAGCTTATTCATTACGGAGCAGATAAAGTTCTTACCGCTGAGGACCCGA 199
|||.||.||.||||||||.||.||.|.|||.|||||.||.||..|||||.
BL00327___etf 150 AGAACTGATCCATTACGGCGCTGACAGAGTGCTTACAGCCGAAAACCCGC 199
BSNT_04162___ 200 AGCTGAAAACATACACGGCAGACGGGTACAGCCAGGTCATGAGAGGTGTT 249
...||||||..||.|||.|.|||||.|| .|.||| ||...||||
BL00327___etf 200 TCTTGAAAAACTATACGTCTGACGGCTA-----TGTTCA--AGCCTTGTT 242
BSNT_04162___ 250 ATCGAGCA-AGAA------AATCCTGA-TTCAGTCATCTTCGGGCATACG 291
..|||.|| |||| |||||.|| .||| ||||.|||||.||||||
BL00327___etf 243 GCCGATCATAGAACGCGAGAATCCGGACGTCA-TCATTTTCGGACATACG 291
BSNT_04162___ 292 GCAATGGGCAAGGATCTT-TCACCGAAGCTTGCTGCCCGGCTGCAAACAG 340
.|||||||.||.|| ||| ||.|||||||||.|.|||||..||..|||||
BL00327___etf 292 TCAATGGGAAAAGA-CTTGTCGCCGAAGCTTTCAGCCCGTATGGGAACAG 340
BSNT_04162___ 341 GCTTAATTTCTGATGCTATAGATGT--AAGCGTTACCGGAGGGAATGTTG 388
|..|.||.||.|||||..|.||||| || ||..||||.||.||..|.|
BL00327___etf 341 GGCTGATATCGGATGCCGTCGATGTCGAA--GTGGCCGGCGGCAACATCG 388
BSNT_04162___ 389 TGTTCACACGGCCGATTTACTCGGGGAAAGCTTTTGAACGCGTCATTTC- 437
||||.|||.||||||||||||||||.|||||.||||||||..|||||||
BL00327___etf 389 TGTTTACAAGGCCGATTTACTCGGGCAAAGCGTTTGAACGGATCATTTCC 438
BSNT_04162___ 438 -AACCGATCCGATGATCTTTGCAACAATTCGCCCCAATAACAT--TCAAG 484
|| |||...|.|||.||||||||.||..|.||.|||||.|| .|..|
BL00327___etf 439 GAA--GATGAAACGATTTTTGCAACGATCAGACCGAATAATATCGCCCCG 486
BSNT_04162___ 485 CTTCAGAAAAA---------GACATCAGCAGATCGGGAAGCATCGAAAGC 525
|||.|.|||.| ||||..||| |.|| |.|||||||| ||||
BL00327___etf 487 CTTGACAAAGATGAGACGCGGACAGGAGC-GGTC-GAAAGCATCG-AAGC 533
BSNT_04162___ 526 ATAAATGTCTCTCTTACTGACCTTCGCACCGTGATTCAA-GAGGTCGTCA 574
|.| |.||...|||.|..|.||.||.| |||| ||..|.||||
BL00327___etf 534 AGA--------TATTCGGGACATCAGAACGGTCA-TCAAGGACATTGTCA 574
BSNT_04162___ 575 AAAAAACAGCTGACGGTGTTGATCTCTCCGAAGCGAAAATTATCGTTGCG 624
|||||||..|.||.||.||.|||.|.||.|||||||||||||||||.||.
BL00327___etf 575 AAAAAACGTCCGAAGGCGTCGATTTGTCTGAAGCGAAAATTATCGTAGCC 624
BSNT_04162___ 625 GGCGGCCGAGGAGTCAAAAGTAAGGAAGGATTTCAGCCGCTGCAGGAGCT 674
|||||.||.||.||||||||..|||||||.|||.|.||||||||||||||
BL00327___etf 625 GGCGGTCGCGGCGTCAAAAGCGAGGAAGGCTTTAAACCGCTGCAGGAGCT 674
BSNT_04162___ 675 TGCAGAGGTGCTAGGGGCCGCAGTCGGGGCTTCTCGCGGGGCATGTGACG 724
.||.||.||..|.||.|..||.|||||.|||||..|.||.||.|||||||
BL00327___etf 675 CGCCGATGTATTGGGCGGGGCGGTCGGCGCTTCAAGGGGAGCCTGTGACG 724
BSNT_04162___ 725 CTGATTATTGCGATTATGCTCTCCAAATCGGGCAGACCGGGAAAGTCGTT 774
|.||.||.|||||.|||.|.||.||||||||.||||||||.|||||.||.
BL00327___etf 725 CAGACTACTGCGACTATTCGCTTCAAATCGGCCAGACCGGCAAAGTTGTG 774
BSNT_04162___ 775 ACTCCGGATTTGTACATTGCATGCGGCATTTCCGGCGCCATCCAGCATTT 824
||.||.||.||.||.|||||.|||||||||||.||.||.||.|||||..|
BL00327___etf 775 ACACCTGACTTATATATTGCCTGCGGCATTTCAGGAGCGATTCAGCACCT 824
BSNT_04162___ 825 GGCCGGCATGTCAAACAGCAAGGTGATCGTCGCCATCAATAAAGACCCCG 874
.||.||.||||||||||||||..|.|||||.||||||||.|||||.||.|
BL00327___etf 825 CGCAGGGATGTCAAACAGCAAAATCATCGTTGCCATCAACAAAGATCCGG 874
BSNT_04162___ 875 AAGCCGATATCTTTAAAATAGCGGATTACGGCATCGTCGGTGATTTATTT 924
||||.|||||.||||||||.||.||.|||||.||||||||.||.||||||
BL00327___etf 875 AAGCTGATATATTTAAAATTGCCGACTACGGGATCGTCGGCGACTTATTT 924
BSNT_04162___ 925 GAAGTTGTCCCGTTATTAACTGAGGAATTCAAACAATTGAATATACA-CT 973
|||.|.||.|||.|..|.||.||||||||.|||.|..|||...| || |.
BL00327___etf 925 GAAATCGTTCCGCTGCTCACGGAGGAATTTAAAAAGCTGAGCGT-CAGCA 973
BSNT_04162___ 974 CATAA 978
|||.|
BL00327___etf 974 CATGA 978
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