Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04156 and BL00325
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_04156___uvrC.1.5803.seq
# -bsequence dna-align/BL00325___uvrC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04156___uvrC-BL00325___uvrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04156___uvrC-BL00325___uvrC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04156___uvrC
# 2: BL00325___uvrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1797
# Identity: 1356/1797 (75.5%)
# Similarity: 1356/1797 (75.5%)
# Gaps: 48/1797 ( 2.7%)
# Score: 5051.0
#
#
#=======================================
BSNT_04156___ 1 ATGAACAAACAACTGAAAGAAAAACTCGCCCTCCTTCCTGATCAACCGGG 50
|||||||||.||.|.||||||||.||.|||||.|||||.|||||.||.||
BL00325___uvr 1 ATGAACAAAAAAATCAAAGAAAAGCTGGCCCTTCTTCCGGATCAGCCTGG 50
BSNT_04156___ 51 TTGTTATCTT-ATGAAGGACCGGCAGCAGACTGTGATCTACGTAGGGAAA 99
.||.|| ||| |||||.|||.|||||.|.||.||.||||||||.||||||
BL00325___uvr 51 CTGCTA-CTTGATGAAAGACAGGCAGGATACCGTCATCTACGTCGGGAAA 99
BSNT_04156___ 100 GCAAAAGTGCTGAAAAACAGAGTGCGCTCCTACTTCACCGGTTCTCACGA 149
||.|||.|..|.||||||||.||.||||||||.||||.|||.||.||.||
BL00325___uvr 100 GCGAAAATCTTAAAAAACAGGGTCCGCTCCTATTTCAGCGGGTCCCATGA 149
BSNT_04156___ 150 CGCGAAAACCCAAAGGCTTGTGACGGAAATCGAGGATTTTGAATATATCG 199
.||.|||||.||..|.|||||.|..|||||.||.||.||.|||||.||.|
BL00325___uvr 150 TGCCAAAACACAGCGTCTTGTCAGTGAAATTGAAGACTTCGAATACATTG 199
BSNT_04156___ 200 TGACGTCCTCCAATCTTGAAGCGCTTATTTTAGAAATGAATCTGATCAAA 249
|.||.|||||.||..|.||||||||.|||.|.|||||||||.|.||||||
BL00325___uvr 200 TCACATCCTCGAACATCGAAGCGCTCATTCTTGAAATGAATTTAATCAAA 249
BSNT_04156___ 250 AAGCATGATCCGAAATACAACGTCATGCTCAAAGACGACAAAACCTATCC 299
|||.|.||.||||||||.|||||.|||||.|||||.||.||||.|||.||
BL00325___uvr 250 AAGTACGACCCGAAATATAACGTGATGCTTAAAGATGATAAAAGCTACCC 299
BSNT_04156___ 300 TTTCATAAAACTCACCCATGAACGCCACCCAAGGCTAATTGTCACCCGCA 349
.|||||.|||.||||..|.||.||.||.||.|.|||..|||||||..|.|
BL00325___uvr 300 GTTCATTAAAATCACGAACGAGCGGCATCCGAAGCTGGTTGTCACAAGGA 349
BSNT_04156___ 350 ATGTCAAAAAAGACAAAGGGCGCTATTTCGGGCCGTATCCGAATGTACAG 399
|.|||||||||||||||||.|||||||||||||||||.||.|||||.|||
BL00325___uvr 350 AGGTCAAAAAAGACAAAGGCCGCTATTTCGGGCCGTACCCCAATGTCCAG 399
BSNT_04156___ 400 GCAGCAAGGGAAACAAAAAAACTGCTCGACCGTCTGTATCCTCTCAGAAA 449
||.||.||||||||||||||.|||||.|||||.||.|||||.||||||||
BL00325___uvr 400 GCTGCGAGGGAAACAAAAAAGCTGCTGGACCGCCTCTATCCGCTCAGAAA 449
BSNT_04156___ 450 ATGCTCCAAGCTCCCGGACAGAGTGTGCCTTTACTATCATCTGGGCCAAT 499
.|||.|||||||.||.|||.|.||.||..|.|||||||||||.||.||||
BL00325___uvr 450 GTGCGCCAAGCTGCCTGACCGCGTCTGTTTGTACTATCATCTCGGACAAT 499
BSNT_04156___ 500 GCCTCGCTCCGTGTGTAAAGGATATTTCCGAAGAGACGAACAGAGAGCTG 549
|.||.||.||.||.|||.|.|||.|.||.||.|||||.||||||.||||.
BL00325___uvr 500 GTCTGGCGCCATGCGTATATGATGTGTCTGAGGAGACAAACAGACAGCTC 549
BSNT_04156___ 550 GTTGAAAGCATTACACGTTTCTTAAGGGGCGGCTATAATGAGGTCAAAAA 599
...|||...|||||.||.||.||||..||||||||.|||||.||.||.||
BL00325___uvr 550 ACAGAAGAAATTACCCGCTTTTTAAAAGGCGGCTACAATGAAGTGAAGAA 599
BSNT_04156___ 600 AGAGCTTGAAGAGAAAATGCATGAAGCTGCTGAGAATCTTGAGTTTGAAC 649
|||||||||||..|||||||..|||||..|.||.||.||..|||||||||
BL00325___uvr 600 AGAGCTTGAAGCAAAAATGCTCGAAGCCTCGGAAAACCTGCAGTTTGAAC 649
BSNT_04156___ 650 GAGCAAAAGAGCTTCGTGACCAAATTGCCCATATTGAATCAACGATGGAA 699
|.||.|||||..|.||.||.||||||||||||||.||.||||||||||||
BL00325___uvr 650 GGGCGAAAGAATTCCGCGATCAAATTGCCCATATCGAGTCAACGATGGAA 699
BSNT_04156___ 700 AAACAAAAAATGACGATGAACGATCTAGTCGACCGTGATGTATTCGCGTA 749
|||||.|||||||.|.||||.||..|.||.|||||.||||||||.||.||
BL00325___uvr 700 AAACAGAAAATGATGCTGAATGACATGGTTGACCGCGATGTATTTGCCTA 749
BSNT_04156___ 750 CGCGTACGATAAGGGCTGGATGTGCGTGCAGGTCTTTTTCATCCGCCAAG 799
..||||.||.|||||||||||||||||.||||||||.||||||.|.||.|
BL00325___uvr 750 TTCGTATGACAAGGGCTGGATGTGCGTCCAGGTCTTCTTCATCAGGCAGG 799
BSNT_04156___ 800 GAAAGCTCATTGAACGCGATGTCAGCATGTTCCCGCTTTAT-CA-GGAAG 847
|.||..|.||||||.|.||||||||||||||.| |||||| || |||||
BL00325___uvr 800 GCAAATTGATTGAAAGAGATGTCAGCATGTTTC--CTTTATACAGGGAAG 847
BSNT_04156___ 848 CAGATGAAGAGTTCCTCACGTTCATCGGGCAGTTCTATTCAAAAAACAAC 897
||||.||.||.||.||.||.|||||||||||.||.||.||.|||||||||
BL00325___uvr 848 CAGACGAGGAATTTCTGACATTCATCGGGCAATTTTACTCCAAAAACAAC 897
BSNT_04156___ 898 CACTTCCTTCCGAAGGAGATTTTAGTTCCGGACAGCGTAGATCAA-TCCA 946
||.||.|||||||||||.|||||.||.||.||||||||.|| ||| ..||
BL00325___uvr 898 CATTTTCTTCCGAAGGAAATTTTGGTGCCTGACAGCGTCGA-CAAGGACA 946
BSNT_04156___ 947 TGATCGAGCAGCTGCTGGAAACAAACGTTCACCAGCCGAAGAAAGGCCCG 996
||||.|||.||||..||||....|||||.|.|||||||||.|.|||..||
BL00325___uvr 947 TGATTGAGGAGCTTTTGGACGTGAACGTGCGCCAGCCGAAAAGAGGAGCG 996
BSNT_04156___ 997 AAAAAAGAACTGCTCATGCTTGCCCATAAAAATGCGAAAATCGCATTGAA 1046
||||||||.|||||..|.|||||||||||||||||.||..||||.|||||
BL00325___uvr 997 AAAAAAGACCTGCTGCTCCTTGCCCATAAAAATGCAAAGCTCGCTTTGAA 1046
BSNT_04156___ 1047 AGAAAAATTCTCTTTAATCGAACGGGACGAGGAGCGTTCAATCGGGGC-A 1095
.||.||.||.||..|.||.||||||||.||.|||||..|.|||||.|| |
BL00325___uvr 1047 GGAGAAGTTTTCGCTCATTGAACGGGATGAAGAGCGGACGATCGGCGCGA 1096
BSNT_04156___ 1096 GTGCAGAAACTAGGTGAGGCATTAAATATTTATACGCCGCACAGAATTGA 1145
.|| |.||.||.||..|.||..|..|.||.||.|||||..||||||||||
BL00325___uvr 1097 TTG-AAAAGCTCGGAAAAGCGCTGGACATCTACACGCCATACAGAATTGA 1145
BSNT_04156___ 1146 AGCGTTTGATAACTCAAACATACAGGGGACAAACCCGGTTTCTGCGATGA 1195
||||||||||||||||||.||.||.||.||..||||.|||||.||.|||.
BL00325___uvr 1146 AGCGTTTGATAACTCAAATATTCAAGGAACGGACCCTGTTTCGGCCATGG 1195
BSNT_04156___ 1196 TTGTGTTTATCGATGGCAAACCATACAAAAAGGAATACCGCAAATATAAA 1245
||||.|||.|||||||.|||||..|.|||||.||.||||||||||||||.
BL00325___uvr 1196 TTGTATTTCTCGATGGAAAACCGCATAAAAAAGAGTACCGCAAATATAAG 1245
BSNT_04156___ 1246 ATCAAAACCGTTACAGGGCCGGATGATTATGGTTCTATGAGAGAGGTTGT 1295
|||||.||.|||..|||.||.||.||.||.||.||.|||.|.||.||..|
BL00325___uvr 1246 ATCAAGACGGTTGAAGGTCCTGACGACTACGGATCAATGCGCGAAGTCAT 1295
BSNT_04156___ 1296 CAGAAGACGCTATACGAGAGTGCTTCGTGAGAATCTGCCGCTGCCCGATC 1345
|||||||.|.|||||.||.|||||....|||||||||||||||||.|||.
BL00325___uvr 1296 CAGAAGAAGATATACAAGGGTGCTGAAAGAGAATCTGCCGCTGCCTGATT 1345
BSNT_04156___ 1346 TGATCATCATTGACGGAGGAAAAGGGCAGATCAACGCAGCAAGGGATGTC 1395
|.||..|.||.|||||.|||||.||||||.|....||.||....||.||.
BL00325___uvr 1346 TAATTTTGATCGACGGCGGAAAGGGGCAGGTGTCTGCCGCCCTTGACGTT 1395
BSNT_04156___ 1396 ATTGAAAATGAACTCGGCTTGGATATCCCGATCGCCGGTTTAGCGAAAGA 1445
.|.|||||||||||.||..|.|||.||||..|.||||||.|.|.||||||
BL00325___uvr 1396 CTGGAAAATGAACTGGGTCTCGATGTCCCTGTTGCCGGTCTGGTGAAAGA 1445
BSNT_04156___ 1446 TGAAAAACACAGAACCTCAAA--TTTACTGATCGGTGATCCGCTGGAGGT 1493
.||.||.||||||||.||.|| ||| |||||||.|||||.||.|||.|
BL00325___uvr 1446 CGATAAGCACAGAACATCCAACCTTT--TGATCGGCGATCCCCTTGAGAT 1493
BSNT_04156___ 1494 GGTGTATCTGGAACGAAACAGCCAGGAATTTTACCTCCTGCAGCGCATTC 1543
.||..|.||.||.||.||||||||||||||||||||.||.||||||||||
BL00325___uvr 1494 CGTCCAGCTTGAGCGGAACAGCCAGGAATTTTACCTGCTTCAGCGCATTC 1543
BSNT_04156___ 1544 AGGACGAGGTGCACCGTTTTGCAATCAGTTTTCACAGGCAAATCCGCGGA 1593
|||||||.||||||.|.|||||.|||||.||.||||||||..||.|.|||
BL00325___uvr 1544 AGGACGAAGTGCACAGGTTTGCGATCAGCTTCCACAGGCAGCTCAGGGGA 1593
BSNT_04156___ 1594 AAAAGCGCGTTTCAATCCGTTTTGGACGACATCCCGGGTATCGGAGAGAA 1643
||||||||.||||||||.||..||||||.|||.|||||..||||.||..|
BL00325___uvr 1594 AAAAGCGCATTTCAATCGGTGCTGGACGGCATACCGGGCGTCGGCGAACA 1643
BSNT_04156___ 1644 AAGAAAGAAAATGCTGTTAAAGCATTTCGGTTCCGTTAAAAAAATGAAGG 1693
..|.||.|||.||||||||||.|||||||||||||||||.||||||||||
BL00325___uvr 1644 GCGGAAAAAACTGCTGTTAAAACATTTCGGTTCCGTTAAGAAAATGAAGG 1693
BSNT_04156___ 1694 AAGCAAGCCTTGAGGACATCAAAAAAGCCGGTGTTCCCGCA---GCGG-- 1738
||||.|||...||.||.|| ||||| .|||
BL00325___uvr 1694 AAGCGAGCGCCGAAGATAT-----------------CCGCAAGCTCGGCA 1726
BSNT_04156___ 1739 ------------CGGCTCAGCTCCTTTACGACAAATTGCAAAAATAA 1773
||||.|||||..|..|.||...||||.||||||||
BL00325___uvr 1727 TACCTCTGAAAACGGCGCAGCTGATCGAAGAGGCATTGAAAAAATAA 1773
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