Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04153 and BL00324
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_04153___lysC.1.5803.seq
# -bsequence dna-align/BL00324___lysC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04153___lysC-BL00324___lysC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04153___lysC-BL00324___lysC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04153___lysC
# 2: BL00324___lysC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1256
# Identity: 935/1256 (74.4%)
# Similarity: 935/1256 (74.4%)
# Gaps: 55/1256 ( 4.4%)
# Score: 3431.5
#
#
#=======================================
BSNT_04153___ 1 ATGGGTCTTATTGTACAAAAATTCGGAGGCACTTCCGTCGGCTCAGTCGA 50
||||||||.||.||.||||||||.||.||.||||||||.||.|||||.||
BL00324___lys 1 ATGGGTCTCATCGTCCAAAAATTTGGCGGAACTTCCGTAGGGTCAGTGGA 50
BSNT_04153___ 51 AAAAATTCAAAATGCGGCAAACCGCGCAATTGCAGAAAAACAGAAAGGCC 100
||||||....||||..|||.||||||..||.|.||||||||||...||.|
BL00324___lys 51 AAAAATATTGAATGTCGCATACCGCGTCATCGAAGAAAAACAGCGCGGTC 100
BSNT_04153___ 101 ATCAAGTCGTTGTCGTCGTTTCAGCAATGGGAAAATCCACTGACGAATTG 150
||.|.||.||.|||||||||||.||.|||||.|||||.||.|||....|.
BL00324___lys 101 ATGATGTTGTCGTCGTCGTTTCGGCGATGGGCAAATCGACGGACTCCCTC 150
BSNT_04153___ 151 GTCAGC-CTTGCAAAAGCTATTTCTGACCAGCCGAGCAAACGCGAAATGG 199
||| || |||||.||.|..||..|.||.||||||||||...|.|||||||
BL00324___lys 151 GTC-GCGCTTGCCAAGGAAATCACCGAGCAGCCGAGCAGCAGGGAAATGG 199
BSNT_04153___ 200 ATATGCTGCTGGCGACAGGCGAGCAGGTCACGATTTCACTCCTTTCAATG 249
|.|||||||||.|.|||||.||||||||.||||||||.||..|..|||||
BL00324___lys 200 ACATGCTGCTGACAACAGGAGAGCAGGTGACGATTTCGCTGTTGACAATG 249
BSNT_04153___ 250 GCATTGCAGGAAAAAGGCTATGATGCTGTGTCTTATACTGGCTGGCAGGC 299
||.||||||.|.||.||.||||||||.||.||.|||||.|||||||||||
BL00324___lys 250 GCTTTGCAGAACAAGGGGTATGATGCGGTTTCCTATACAGGCTGGCAGGC 299
BSNT_04153___ 300 GGGAATCCGTACGGAGGCCATTCACGGAAACGCCAGAATTACAGATATCG 349
.||.|||...||.||....||||||||.|||||.||||||||..|.||.|
BL00324___lys 300 CGGCATCGAAACCGAAAATATTCACGGCAACGCAAGAATTACGAACATTG 349
BSNT_04153___ 350 ACACTTCGGTTTTAGCAGACCAGCTTGAAA-------------AAGGAAA 386
|.| |||.|.||| ||||| ||||.||
BL00324___lys 350 ATA------------CAGCCAAGC-TGAAAGAGCGCCTGAATGAAGGGAA 386
BSNT_04153___ 387 AATTGTCATTGTTGCAGGATTCCAAGGCATGACAGAGGATTGTGAAATTA 436
|||.|.|.||||.||.||||||||.|||.|.||||.|||..|.|||||.|
BL00324___lys 387 AATCGCCGTTGTCGCCGGATTCCAGGGCGTCACAGCGGAAGGCGAAATCA 436
BSNT_04153___ 437 CGACATTGGGCCGGGGCGGTTCAGATACAACAGCAGTTGCTTTGGCTGTC 486
|.||..|.|||.|.|||||.||||||||.|||||.|||||..|.||.|..
BL00324___lys 437 CAACGCTCGGCAGAGGCGGATCAGATACGACAGCCGTTGCCCTCGCAGCA 486
BSNT_04153___ 487 GCTTTAAAAGCTGATAAATGTGACATATACACAGACGTGCCAGGCGTGTT 536
||..|.||||||||||||||.|||||.|||||.||.|||||.||.||.||
BL00324___lys 487 GCCCTGAAAGCTGATAAATGCGACATTTACACCGATGTGCCGGGGGTTTT 536
BSNT_04153___ 537 TACAACTGATCCGCGCTATGTGAAATCAGCGAGAAAACTTGCGGGCATCT 586
.||.||.|||||.||||||||||||.|||||.|.||.||.||.||.||||
BL00324___lys 537 CACGACGGATCCCCGCTATGTGAAAACAGCGCGGAAGCTGGCCGGAATCT 586
BSNT_04153___ 587 CATACGATGAAATGCTTGAGCTTGCCAATTTAGGCGCCGGTGTTCTTCAT 636
|.||||||||||||||.||||||||||||.|.||.||.||.||.||||||
BL00324___lys 587 CCTACGATGAAATGCTGGAGCTTGCCAATCTTGGAGCAGGCGTCCTTCAT 636
BSNT_04153___ 637 CCGAGAGCAGTTGAGTTCGCGAAAAATTACCAAGTGCCGTTAGAAGTGCG 686
||||||||.|||||.||.||||||||.|||||.|||||.||.|||||.||
BL00324___lys 637 CCGAGAGCTGTTGAATTTGCGAAAAACTACCAGGTGCCTTTGGAAGTCCG 686
BSNT_04153___ 687 TTCAAGTACAGAAACCGAAGCGGGAACATTAATTGAGGAGGAATCATCCA 736
||||||.||.||||..|||||.||.||||||||.||||||||||||||.|
BL00324___lys 687 TTCAAGCACCGAAAAAGAAGCCGGCACATTAATCGAGGAGGAATCATCAA 736
BSNT_04153___ 737 TGGAACAGAATTTAATTGTCAGAGGCATTGCATTTGAAGATCAAATCACA 786
||||||||||||||||.||.|||||||||||||||||||||||.||||||
BL00324___lys 737 TGGAACAGAATTTAATCGTAAGAGGCATTGCATTTGAAGATCAGATCACA 786
BSNT_04153___ 787 AGAGTAACCATTTACGGGCTGACTAGCGGTCTGACAACTTTGTCTACTAT 836
.|.||.|||.|.|.|||.|||.|.|||||.|||||.||..||||.||.||
BL00324___lys 787 CGCGTGACCGTATGCGGCCTGGCGAGCGGCCTGACGACGCTGTCAACGAT 836
BSNT_04153___ 837 TTTTACGACACTTGCCAAA-AGAAACATAAACGTGGATATCATTATCCAA 885
||||||.||.||.|||||| || |||||.|||||.||.|||||.||.|||
BL00324___lys 837 TTTTACAACGCTCGCCAAACAG-AACATCAACGTTGACATCATCATTCAA 885
BSNT_04153___ 886 ACG----CAGGC-CGAGGACAAGAC-TGGAATTTCCTTCTCTGTCAAAAC 929
.|| ||||| |.|| |||.|| |.| |||||.|||||.||.|||||
BL00324___lys 886 TCGGTGACAGGCACAAG--CAAAACGTCG-ATTTCTTTCTCAGTGAAAAC 932
BSNT_04153___ 930 AGAAGATGCAGATCAAACCGTTGCGGTGCTTGAAGAGTATAAAGACGCGC 979
.|||||...|.|.|..||.||||..||.||.|||||.||.||||||||||
BL00324___lys 933 GGAAGACTTAAAACGGACGGTTGAAGTTCTCGAAGAATACAAAGACGCGC 982
BSNT_04153___ 980 TGGAATTTGAGAAAATCGAGACAGAAAGCAAATTGGCT----AAAGTATC 1025
|.||.|.|||..|.||.||.||.||||.|| |||| |||||.||
BL00324___lys 983 TCGACTATGAACAGATTGAAACGGAAAACA----GGCTTGCCAAAGTGTC 1028
BSNT_04153___ 1026 CATTGTTGGATCCGGCATGGTCTCAAATCCTGGTGTAGCGGCTGAAATGT 1075
.||.||.||.||.||||||.||||.||.||.||.|||||.||.|||||||
BL00324___lys 1029 GATCGTCGGTTCTGGCATGATCTCCAACCCGGGAGTAGCAGCGGAAATGT 1078
BSNT_04153___ 1076 TTGCTGTACTGGCGCAAAAAAACATTTTAATCAAAATGGTCAGCACTTCT 1125
|.|||||.||||||.||||||||||.....||||||||||||||||.||.
BL00324___lys 1079 TCGCTGTGCTGGCGGAAAAAAACATCCAGGTCAAAATGGTCAGCACATCC 1128
BSNT_04153___ 1126 GAAATCAAAGTGTCAACAGTCGTAAGCGAAAATGACATGGTGAAAGCAGT 1175
|||||||||||.||.||.|||||.|.||||...||.|||||||||||.||
BL00324___lys 1129 GAAATCAAAGTTTCGACTGTCGTCAACGAAGGCGATATGGTGAAAGCCGT 1178
BSNT_04153___ 1176 CGAGTCGCTTCACGATGCATTTGAGCTTTCAAA----ACACCCTTCAGCT 1221
.||..||||.||.|||||.|||||.||.||.|| |||.|..|||
BL00324___lys 1179 TGAAGCGCTGCATGATGCTTTTGAACTGTCGAAGCAGACAGCAGTCA--- 1225
BSNT_04153___ 1222 GTGTAA 1227
|.|||
BL00324___lys 1226 -TTTAA 1230
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