Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04183 and BL00309
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence dna-align/BSNT_04183___sspI.1.5803.seq
# -bsequence dna-align/BL00309___sspI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04183___sspI-BL00309___sspI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04183___sspI-BL00309___sspI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04183___sspI
# 2: BL00309___sspI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 166/216 (76.9%)
# Similarity: 166/216 (76.9%)
# Gaps: 3/216 ( 1.4%)
# Score: 631.0
#
#
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BSNT_04183___ 1 ATGGATCTTAATTTACGTCATGCCGTCATTGCCAATGTCACCGGCAATAA 50
||||||.|.|||||.||.||||||||.|||||||||||..|.||.||...
BL00309___ssp 1 ATGGATTTGAATTTGCGCCATGCCGTTATTGCCAATGTATCAGGGAACTC 50
BSNT_04183___ 51 TCAGGAGCAGCTTGAGCATACAATCGTAGATGCGATTCAAAGCGGTGAAG 100
.||.||..|||||||.|||||.|||||.||||||||.|||||||||||||
BL00309___ssp 51 GCAAGAAGAGCTTGAACATACGATCGTCGATGCGATCCAAAGCGGTGAAG 100
BSNT_04183___ 101 AAAAAATGCTTCCAGGGCTCGGCGTTTTATTCGAAGTCATTTGGCAGCAC 150
|||||||||||||.||..|.||.||.||.|||||.|||||.|||||||||
BL00309___ssp 101 AAAAAATGCTTCCGGGATTGGGTGTGTTGTTCGAGGTCATCTGGCAGCAC 150
BSNT_04183___ 151 GCATCCGAAAGTGAGAAAAACGAAATGCTGAAAACGCTTGAAGGCGGATT 200
|||.|.|||...||.||||.|||||||||..|.||..|.|||...|||||
BL00309___ssp 151 GCAACTGAATCAGACAAAACCGAAATGCTCGAGACATTGGAACAAGGATT 200
BSNT_04183___ 201 AAAACCCGCCGAATAA 216
|||| ||..|||||
BL00309___ssp 201 AAAA---GCGAAATAA 213
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