Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02037 and BL00290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:32
# Commandline: needle
# -asequence dna-align/BSNT_02037___manA.1.5803.seq
# -bsequence dna-align/BL00290___manA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02037___manA-BL00290___manA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02037___manA-BL00290___manA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02037___manA
# 2: BL00290___manA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 969
# Identity: 740/969 (76.4%)
# Similarity: 740/969 (76.4%)
# Gaps: 36/969 ( 3.7%)
# Score: 2769.0
#
#
#=======================================
BSNT_02037___ 1 ATGACGACTGAACCGTTATTTTTCAAGCCTGTTTTCAAAGAAAGAATTTG 50
|.|||||||||||||||||||.||||||||||.|||||||||||.||
BL00290___man 1 ---ATGACTGAACCGTTATTTTTCGAGCCTGTTTTTAAAGAAAGAATATG 47
BSNT_02037___ 51 GGGCGGGACCGCTTTAGCTGATTTTGGCTATACCATTCCGTCACAACGAA 100
||||||.||.||||||||...|||.||||||..||||||.||..|||.||
BL00290___man 48 GGGCGGAACGGCTTTAGCCTCTTTCGGCTATGACATTCCATCCGAACAAA 97
BSNT_02037___ 101 CAGGGGAGTGCTGGGCTTTTGCCGCGCATCAAAATGGTCAAAGCGTTGTT 150
|||||||||||||||||||.|||||.|||||||||||.||||||||.||.
BL00290___man 98 CAGGGGAGTGCTGGGCTTTCGCCGCACATCAAAATGGACAAAGCGTCGTG 147
BSNT_02037___ 151 CAAAACGGAATGTATAAGGGGTTCACGCTCAGCGAATTATGGGAACATCA 200
.|||||||..|||||||.|||.||||..|.||||||||||||||..|.||
BL00290___man 148 AAAAACGGCTTGTATAAAGGGCTCACATTAAGCGAATTATGGGATGAACA 197
BSNT_02037___ 201 TAGACATTTATTCGGACAGCT-TGAAGGG-GACCGTTTTCCTCTGCTTAC 248
..|.|||||||||||||| | |.||||| |||||.||||||||..|.||
BL00290___man 198 CCGTCATTTATTCGGACA--TATAAAGGGAGACCGCTTTCCTCTTTTGAC 245
BSNT_02037___ 249 AAAAATATTAGATGCTGACCAGGACTTATCTGTTCAGGTGCATCCGAATG 298
||||||.||.||.||.|||||.|||.||||.||.||.||||||||.||||
BL00290___man 246 AAAAATTTTGGACGCCGACCAAGACCTATCCGTACAAGTGCATCCAAATG 295
BSNT_02037___ 299 ATGAGTATGCCAACATACATGAAAACGGTGAGCTTGGAAAAACAGAATGC 348
||||.|||||.||..|.||.||||||||.|||||||||||.||.||||||
BL00290___man 296 ATGAATATGCAAAGCTGCACGAAAACGGGGAGCTTGGAAAGACGGAATGC 345
BSNT_02037___ 349 TGGTACATTATTGATTGCCAAAAAGATGCCGAGATTATTTATGGCCACAA 398
|||||.||.|||||||||.|..|||||||.|||||.|||||.||||||.|
BL00290___man 346 TGGTATATCATTGATTGCAAGGAAGATGCGGAGATCATTTACGGCCACCA 395
BSNT_02037___ 399 TGCAACAACAAAGGAAGAACT-AACTACCATGATAGAGCGTGGAGAATGG 447
|||.|..||...||||||||| ..|| |.|||||.||....|||.|||||
BL00290___man 396 TGCCAAGACGCGGGAAGAACTGGTCT-CAATGATCGAAAACGGAAAATGG 444
BSNT_02037___ 448 GATGAGCTCTTGCGCCGTGTAAAGGTAAAGCCGGGGGATTTTTTCTATGT 497
.|||||||.||||||||.||.||.||.||||||||.|||||.||||||||
BL00290___man 445 AATGAGCTTTTGCGCCGCGTCAAAGTGAAGCCGGGAGATTTCTTCTATGT 494
BSNT_02037___ 498 GCCAAGCGGTACTGTTCATGCGATTGGAAAAGGAATTCTTG-CTTTGGAG 546
|||.|||||.||.||.||||||||.||||||||.||| ||| .|||||||
BL00290___man 495 GCCGAGCGGAACCGTCCATGCGATCGGAAAAGGCATT-TTGATTTTGGAG 543
BSNT_02037___ 547 ACGCAGCAGAATTCAGACACAACCTACAGATTATATGATTATGACCGAAA 596
||||||||||||||.|||||||||||||||.||||||||||||||.||||
BL00290___man 544 ACGCAGCAGAATTCTGACACAACCTACAGACTATATGATTATGACAGAAA 593
BSNT_02037___ 597 AGATGCAGAAGGCAAGCTGCGCGAGCTTCATCTGAAAAAGAGCATCGAAG 646
|||.||.|||||.||.|||||||||||.|||.||.||||.|||||.||||
BL00290___man 594 AGACGCTGAAGGAAACCTGCGCGAGCTCCATTTGCAAAAAAGCATAGAAG 643
BSNT_02037___ 647 TGATAGAGGTCCCGTCTATTCCAGAACGGCATACAGTTCACCATGAACAA 696
||||.||.||.||||||...||.||.||..|.||.|||||..|.||| |.
BL00290___man 644 TGATCGACGTTCCGTCTTCCCCTGATCGCGAAACCGTTCAATACGAA-AC 692
BSNT_02037___ 697 ATTGAG-GATTTGCTTACAACGA------CATTGGTTGAATGCGCTTACT 739
||.|.| ||..| ||| || ||.||.||||.||..||||.|
BL00290___man 693 ATCGGGCGACGT-----CAA-GACTGCCGCACTGATTGATTGTCCTTATT 736
BSNT_02037___ 740 TTTCGGTGGGGAAATGGAACTTATCAGGATCAGCAAGCTTAAAGCAGCAA 789
|.||.||.|..||||||.|..||..||||||.||..|.||.||.|||.|.
BL00290___man 737 TCTCAGTAGAAAAATGGGATGTAAAAGGATCGGCCTGTTTCAAACAGGAT 786
BSNT_02037___ 790 AAACCATTCCTTCTTATCAGTGTGATTGAAGGGGAGGGCCGTATGATCTC 839
|||||.||.||||||..|||.||.||.||||||||.||.||.||....||
BL00290___man 787 AAACCGTTTCTTCTTGCCAGCGTCATAGAAGGGGAAGGGCGCATCGCATC 836
BSNT_02037___ 840 TGGTGAGTATGTCTATCCTTTCAAAAAAGGAGATCATATGTTGCTGCCTT 889
|||.|...||..||.|.|.||.||||||||||||||.|||.|||||||.|
BL00290___man 837 TGGCGGCCATAACTTTTCATTTAAAAAAGGAGATCACATGCTGCTGCCCT 886
BSNT_02037___ 890 ACGGTCTTGGAGAATTTAAACTCGAAGGATATGCAGAATGTATCGTCTC- 938
..||..||||||||||||..||||..||..||||.||||||||||||||
BL00290___man 887 GGGGCTTTGGAGAATTTACGCTCGCCGGCCATGCGGAATGTATCGTCTCA 936
BSNT_02037___ 939 -------CCATCTG--TAA 948
|.|| || |||
BL00290___man 937 AGCTTATCAAT-TGAATAA 954
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