Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02037 and BL00290

See Amino acid alignment / Visit BSNT_02037 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence dna-align/BSNT_02037___manA.1.5803.seq
#    -bsequence dna-align/BL00290___manA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02037___manA-BL00290___manA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02037___manA-BL00290___manA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02037___manA
# 2: BL00290___manA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 969
# Identity:     740/969 (76.4%)
# Similarity:   740/969 (76.4%)
# Gaps:          36/969 ( 3.7%)
# Score: 2769.0
# 
#
#=======================================

BSNT_02037___      1 ATGACGACTGAACCGTTATTTTTCAAGCCTGTTTTCAAAGAAAGAATTTG     50
                        |.|||||||||||||||||||.||||||||||.|||||||||||.||
BL00290___man      1 ---ATGACTGAACCGTTATTTTTCGAGCCTGTTTTTAAAGAAAGAATATG     47

BSNT_02037___     51 GGGCGGGACCGCTTTAGCTGATTTTGGCTATACCATTCCGTCACAACGAA    100
                     ||||||.||.||||||||...|||.||||||..||||||.||..|||.||
BL00290___man     48 GGGCGGAACGGCTTTAGCCTCTTTCGGCTATGACATTCCATCCGAACAAA     97

BSNT_02037___    101 CAGGGGAGTGCTGGGCTTTTGCCGCGCATCAAAATGGTCAAAGCGTTGTT    150
                     |||||||||||||||||||.|||||.|||||||||||.||||||||.||.
BL00290___man     98 CAGGGGAGTGCTGGGCTTTCGCCGCACATCAAAATGGACAAAGCGTCGTG    147

BSNT_02037___    151 CAAAACGGAATGTATAAGGGGTTCACGCTCAGCGAATTATGGGAACATCA    200
                     .|||||||..|||||||.|||.||||..|.||||||||||||||..|.||
BL00290___man    148 AAAAACGGCTTGTATAAAGGGCTCACATTAAGCGAATTATGGGATGAACA    197

BSNT_02037___    201 TAGACATTTATTCGGACAGCT-TGAAGGG-GACCGTTTTCCTCTGCTTAC    248
                     ..|.||||||||||||||  | |.||||| |||||.||||||||..|.||
BL00290___man    198 CCGTCATTTATTCGGACA--TATAAAGGGAGACCGCTTTCCTCTTTTGAC    245

BSNT_02037___    249 AAAAATATTAGATGCTGACCAGGACTTATCTGTTCAGGTGCATCCGAATG    298
                     ||||||.||.||.||.|||||.|||.||||.||.||.||||||||.||||
BL00290___man    246 AAAAATTTTGGACGCCGACCAAGACCTATCCGTACAAGTGCATCCAAATG    295

BSNT_02037___    299 ATGAGTATGCCAACATACATGAAAACGGTGAGCTTGGAAAAACAGAATGC    348
                     ||||.|||||.||..|.||.||||||||.|||||||||||.||.||||||
BL00290___man    296 ATGAATATGCAAAGCTGCACGAAAACGGGGAGCTTGGAAAGACGGAATGC    345

BSNT_02037___    349 TGGTACATTATTGATTGCCAAAAAGATGCCGAGATTATTTATGGCCACAA    398
                     |||||.||.|||||||||.|..|||||||.|||||.|||||.||||||.|
BL00290___man    346 TGGTATATCATTGATTGCAAGGAAGATGCGGAGATCATTTACGGCCACCA    395

BSNT_02037___    399 TGCAACAACAAAGGAAGAACT-AACTACCATGATAGAGCGTGGAGAATGG    447
                     |||.|..||...||||||||| ..|| |.|||||.||....|||.|||||
BL00290___man    396 TGCCAAGACGCGGGAAGAACTGGTCT-CAATGATCGAAAACGGAAAATGG    444

BSNT_02037___    448 GATGAGCTCTTGCGCCGTGTAAAGGTAAAGCCGGGGGATTTTTTCTATGT    497
                     .|||||||.||||||||.||.||.||.||||||||.|||||.||||||||
BL00290___man    445 AATGAGCTTTTGCGCCGCGTCAAAGTGAAGCCGGGAGATTTCTTCTATGT    494

BSNT_02037___    498 GCCAAGCGGTACTGTTCATGCGATTGGAAAAGGAATTCTTG-CTTTGGAG    546
                     |||.|||||.||.||.||||||||.||||||||.||| ||| .|||||||
BL00290___man    495 GCCGAGCGGAACCGTCCATGCGATCGGAAAAGGCATT-TTGATTTTGGAG    543

BSNT_02037___    547 ACGCAGCAGAATTCAGACACAACCTACAGATTATATGATTATGACCGAAA    596
                     ||||||||||||||.|||||||||||||||.||||||||||||||.||||
BL00290___man    544 ACGCAGCAGAATTCTGACACAACCTACAGACTATATGATTATGACAGAAA    593

BSNT_02037___    597 AGATGCAGAAGGCAAGCTGCGCGAGCTTCATCTGAAAAAGAGCATCGAAG    646
                     |||.||.|||||.||.|||||||||||.|||.||.||||.|||||.||||
BL00290___man    594 AGACGCTGAAGGAAACCTGCGCGAGCTCCATTTGCAAAAAAGCATAGAAG    643

BSNT_02037___    647 TGATAGAGGTCCCGTCTATTCCAGAACGGCATACAGTTCACCATGAACAA    696
                     ||||.||.||.||||||...||.||.||..|.||.|||||..|.||| |.
BL00290___man    644 TGATCGACGTTCCGTCTTCCCCTGATCGCGAAACCGTTCAATACGAA-AC    692

BSNT_02037___    697 ATTGAG-GATTTGCTTACAACGA------CATTGGTTGAATGCGCTTACT    739
                     ||.|.| ||..|     ||| ||      ||.||.||||.||..||||.|
BL00290___man    693 ATCGGGCGACGT-----CAA-GACTGCCGCACTGATTGATTGTCCTTATT    736

BSNT_02037___    740 TTTCGGTGGGGAAATGGAACTTATCAGGATCAGCAAGCTTAAAGCAGCAA    789
                     |.||.||.|..||||||.|..||..||||||.||..|.||.||.|||.|.
BL00290___man    737 TCTCAGTAGAAAAATGGGATGTAAAAGGATCGGCCTGTTTCAAACAGGAT    786

BSNT_02037___    790 AAACCATTCCTTCTTATCAGTGTGATTGAAGGGGAGGGCCGTATGATCTC    839
                     |||||.||.||||||..|||.||.||.||||||||.||.||.||....||
BL00290___man    787 AAACCGTTTCTTCTTGCCAGCGTCATAGAAGGGGAAGGGCGCATCGCATC    836

BSNT_02037___    840 TGGTGAGTATGTCTATCCTTTCAAAAAAGGAGATCATATGTTGCTGCCTT    889
                     |||.|...||..||.|.|.||.||||||||||||||.|||.|||||||.|
BL00290___man    837 TGGCGGCCATAACTTTTCATTTAAAAAAGGAGATCACATGCTGCTGCCCT    886

BSNT_02037___    890 ACGGTCTTGGAGAATTTAAACTCGAAGGATATGCAGAATGTATCGTCTC-    938
                     ..||..||||||||||||..||||..||..||||.|||||||||||||| 
BL00290___man    887 GGGGCTTTGGAGAATTTACGCTCGCCGGCCATGCGGAATGTATCGTCTCA    936

BSNT_02037___    939 -------CCATCTG--TAA    948
                            |.|| ||  |||
BL00290___man    937 AGCTTATCAAT-TGAATAA    954


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