Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02035 and BL00286
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:32
# Commandline: needle
# -asequence dna-align/BSNT_02035___manR.1.5803.seq
# -bsequence dna-align/BL00286___manR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02035___manR-BL00286___manR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02035___manR-BL00286___manR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02035___manR
# 2: BL00286___manR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1987
# Identity: 1543/1987 (77.7%)
# Similarity: 1543/1987 (77.7%)
# Gaps: 83/1987 ( 4.2%)
# Score: 5939.5
#
#
#=======================================
BSNT_02035___ 1 ATGGAATACATAAATACAAGACAAAAAGAGATTTTGTATCTGTTGTTATC 50
||.|||||.||.||||||||.|||.||.|||||||||||||
BL00286___man 1 ---------ATGAATACGAGGCAAAAAGACATTCTGAATCTGTTGTTATC 41
BSNT_02035___ 51 TGAACCTGATGACTATTTAGTTGTGCAAGATTTCGCAGATAGGGTACAGT 100
|||||||||||||||||||||.||.||||||||||||||.||||||.|||
BL00286___man 42 TGAACCTGATGACTATTTAGTCGTACAAGATTTCGCAGACAGGGTAAAGT 91
BSNT_02035___ 101 GTTCTGAAAAAACAATCCGGAATGATTTGAAAGTGATCGAGGATTATCTC 150
|||||||||||||.|||.|.||||||.|||||..|||.||.||.||||||
BL00286___man 92 GTTCTGAAAAAACGATCAGAAATGATCTGAAAACGATTGAAGACTATCTC 141
BSNT_02035___ 151 AATGAGCATTCTCATGCACAGCTTATTCGAAAACCAGGGTTGGGCGTTTA 200
|||.||||||||.||||.||..|.|||||.|||||.||.|||||||||||
BL00286___man 142 AATCAGCATTCTGATGCTCAATTAATTCGCAAACCGGGATTGGGCGTTTA 191
BSNT_02035___ 201 TTTATATATAGAAGAACAAGAAAG-GACCTGGCTAAGCCAACAATTACAT 249
|||..||||.|||||.|||||||| |.|| |..||||||..||||||.||
BL00286___man 192 TTTGAATATTGAAGATCAAGAAAGAGTCC-GTTTAAGCCGGCAATTATAT 240
BSNT_02035___ 250 ACTGAACATTTTTCTTCTAGGCAGCGGAG--------CGATGAAGAAAGA 291
||.|||||| .|.||.||..|| |||||||||||||
BL00286___man 241 ACCGAACAT--------CACGCCGCACAGCAGCTACCCGATGAAGAAAGA 282
BSNT_02035___ 292 ATGCTGCACATTGCTTATGACTTATTAATGAATCCGAAGCCTGTTTCCGC 341
||||||||.||.||||||.|..|||||||||||||.|||||.|||||.||
BL00286___man 283 ATGCTGCAAATCGCTTATCAGCTATTAATGAATCCAAAGCCGGTTTCTGC 332
BSNT_02035___ 342 AAAAGACATTGCTGCTCG-GCATTTTGTCAATCGATCTTCCATAAAAAAG 390
||||||.||.||||| || ||||||..|.|||...||||||||.||||.|
BL00286___man 333 AAAAGAAATGGCTGC-CGAGCATTTCTTGAATAAGTCTTCCATCAAAAGG 381
BSNT_02035___ 391 GATTT--ATACGCAGTAGAAGAGTGGCTGAAGCGTTTTGATCTCACGCTG 438
||||| ||| .|.|.||.|..|||||||||||.||||..|||||.|||
BL00286___man 382 GATTTGAATA--AAATTGACGTTTGGCTGAAGCGGTTTGGCCTCACACTG 429
BSNT_02035___ 439 GTTTCTAGGCAGCGGCTTGGATTAAAGGTTGAAGGGAACGAAAGAAATAA 488
||.||.|.||||||.||.||.||||||.|.|||||.|..||||.||||||
BL00286___man 430 GTATCCAAGCAGCGCCTCGGTTTAAAGATCGAAGGAAGTGAAAAAAATAA 479
BSNT_02035___ 489 AAGAAAGGCATTGGCAAGAATATCTGATTTGATCCACAATACAGCGTTTA 538
.|||||.||..||||..|.||.||.||.|||||..||||..|.|.|||||
BL00286___man 480 GAGAAAAGCGCTGGCGCGCATCTCGGAGTTGATTGACAACCCGGAGTTTA 529
BSNT_02035___ 539 CCAGCCAATTTATTAAAAGTAAGTTTTTACATTATGAAGTAGACTTTGTG 588
|.||||.|||||||||||||||.||||||....|||||||.||.|||||.
BL00286___man 530 CAAGCCGATTTATTAAAAGTAAATTTTTAAGCCATGAAGTGGAATTTGTT 579
BSNT_02035___ 589 ACGAAA--GAAATCAAATCACTACAAAAAAAGCATTCCCTCTATTTCACA 636
| ||| ||.||||.||||.|.||||....||||||..|.||||||||.
BL00286___man 580 A--AAAGTGAGATCAGATCATTGCAAAGGCGGCATTCTTTATATTTCACT 627
BSNT_02035___ 637 GACGAAACGTTTGAAAGTTTGCTGCTGCATACATTGTTAATGGTCCGCCG 686
||.||||||||.||||.|||.|||.|||||||||||.|.|||.|||||||
BL00286___man 628 GATGAAACGTTCGAAAATTTACTGTTGCATACATTGCTGATGATCCGCCG 677
BSNT_02035___ 687 CATCAAAATGAAGCAGCCGAT-TTCATTGTCCCCAAAAGAAATGGCGGCA 735
||||||||||||.|||||||| ..|||| ||.||....|||||.|..|||
BL00286___man 678 CATCAAAATGAAACAGCCGATCACCATT-TCGCCGGGGGAAATCGATGCA 726
BSNT_02035___ 736 GTAAAAAAGAAGAAAGAATATCAATGGACATTTGCTTGTTTACAACGGCT 785
||.||||||||.|||||||.|||.|||||.|||||.||||||.|||||||
BL00286___man 727 GTCAAAAAGAAAAAAGAATTTCAGTGGACGTTTGCCTGTTTAAAACGGCT 776
BSNT_02035___ 786 CGAACCGGTTTTTGCAATCCGCTTCCCTGAAGAAGAAGCCGTGTACTTAA 835
.|||.|.||||||||.||||||||.|||||||||||.|||||.||.||||
BL00286___man 777 GGAAGCTGTTTTTGCGATCCGCTTTCCTGAAGAAGAGGCCGTCTATTTAA 826
BSNT_02035___ 836 CATTACATATATTGGGCGGTAAAGTTCGTTATCCA-TTGCAGACAGAAGA 884
||||.||||||||.|||||.||||||||.||.||| |||.| |.|||||.
BL00286___man 827 CATTGCATATATTAGGCGGAAAAGTTCGCTACCCATTTGGA-AAAGAAGG 875
BSNT_02035___ 885 GAAC------CTTGAAAATGCTGTGCTTCCTAAGGTTGTAGGGCATTTAA 928
|.|| ||.|||||..||.|||||||.||||||||.|...||||||
BL00286___man 876 GGACAGCGGACTGGAAAACCCTTTGCTTCCAAAGGTTGTCGAATATTTAA 925
BSNT_02035___ 929 TCAATCGTGTTTCAGAGCTGAAAATGATGGATTTTCATAAGGATCAGGAT 978
|||||||.||.||||||.||||||||||||||||.|...||||.|.||.|
BL00286___man 926 TCAATCGCGTATCAGAGTTGAAAATGATGGATTTCCGCGAGGACCGGGTT 975
BSNT_02035___ 979 TTGATCAATGGTTTGAACATTCATCTCAATACTGTGCTACAACGGCTGAG 1028
|||||||||||.|||||..||||.||.|||||.||..||.|.||||||||
BL00286___man 976 TTGATCAATGGATTGAAAGTTCACCTTAATACCGTTTTAAACCGGCTGAG 1025
BSNT_02035___ 1029 CTACGATCTTTCTGTAGCAAATCCTATGCTCAATGACATCAAAAAGATGT 1078
|||.||.|||||.|||.|||||||.|||||||||||.||||||||.||||
BL00286___man 1026 CTATGACCTTTCCGTATCAAATCCGATGCTCAATGATATCAAAAAAATGT 1075
BSNT_02035___ 1079 ACCCTTATTTGTTCCACCTCATCATTGATGTTTTGGAAGACATCAATCAT 1128
||||||||.||||.||..|..|||||||||.|.|.|||||||||||.||.
BL00286___man 1076 ACCCTTATCTGTTTCATATTGTCATTGATGCTCTTGAAGACATCAACCAA 1125
BSNT_02035___ 1129 AC-TTTTGATCTTCAAATTCCTGAGGAAGAGGCAGCATATTTGACATTGC 1177
|| ||||.| |||...|||||.||||||||.||.||.|||.|||||||||
BL00286___man 1126 ACGTTTTCA-CTTTCGATTCCCGAGGAAGAAGCCGCCTATCTGACATTGC 1174
BSNT_02035___ 1178 ATTTTCAGGCAGCGATCGAACGGATGCAGTGCAGCAGC-------GAGAC 1220
||||.||.||.||||||| ||.||..|||| .||||
BL00286___man 1175 ATTTCCAAGCGGCGATCG---------AGCGCTTCAGCTATGGAAAAGAC 1215
BSNT_02035___ 1221 A--CATAAAAAGGCGATTATCGTCTGCCACATGGGGATTGGGATGTCACA 1268
| ||||||||.|||||.|||||.||.||.|||||.||.||.||||||||
BL00286___man 1216 AAGCATAAAAAAGCGATCATCGTTTGTCATATGGGCATCGGAATGTCACA 1265
BSNT_02035___ 1269 ATTGCTGCGGACAAAAATTGAACGGAAATGTCATCAAATCGCTGTAATGG 1318
..||||||||||||||||.||||||||||..||.|||||.||.||.||||
BL00286___man 1266 GCTGCTGCGGACAAAAATCGAACGGAAATTCCACCAAATTGCCGTGATGG 1315
BSNT_02035___ 1319 CCTGTATTGCAAAGGCCGATTTAAAGGATTATA--TCAAAAAGCATGAGG 1366
.|||.||.||.||.||.|||||...|||.|||| .|||.| .||.|.|
BL00286___man 1316 ACTGCATCGCGAAAGCAGATTTGGCGGACTATACTGCAAGA--TATAAAG 1363
BSNT_02035___ 1367 ATATTGATCTTGTCATATCCAC---CATTGCGCTGGAGAATATAACGGTT 1413
||||.||.|||||||||||.|| || || ||||||.||.||.|..||
BL00286___man 1364 ATATCGAGCTTGTCATATCAACGGTCA--GC-CTGGAGGATTTATCAATT 1410
BSNT_02035___ 1414 CCCCATATTGTTGTATCTCCGCTTTTAGAGCCTGGC-GAAGAGAAGAAAT 1462
||.||||||||||||||.|||||..|.|||.| ||| ||.|||||.||..
BL00286___man 1411 CCTCATATTGTTGTATCACCGCTGCTCGAGTC-GGCTGATGAGAAAAAGC 1459
BSNT_02035___ 1463 TAAGTGCGTTTATACGTCAGCTGGGCGAATC-ACACCGCCAAAAACAAAA 1511
|.||.|..|||||...||||||.||.||||| || |||||||||||||||
BL00286___man 1460 TCAGCGACTTTATGGATCAGCTCGGTGAATCGAC-CCGCCAAAAACAAAA 1508
BSNT_02035___ 1512 AACGTTTCAGATGCTGAACAATACGACTCCTTTTTTGGTTTTTTTGCAGC 1561
|||||||.|..||||||||.|.||||||||||||.|.|||||.|||||||
BL00286___man 1509 AACGTTTAAAGTGCTGAACGACACGACTCCTTTTCTCGTTTTCTTGCAGC 1558
BSNT_02035___ 1562 AGGAGGCAGAGCACCGCTACAAGTTAATCGAACAGCTGGCGACAGCTTTG 1611
|.|||.||||.||||||||||||.|.||.|||||||||||.|..|||||.
BL00286___man 1559 AAGAGTCAGAACACCGCTACAAGCTGATTGAACAGCTGGCAATCGCTTTA 1608
BSNT_02035___ 1612 TTTGAGAAAGGCTATGTTGATAAGGACTATGCGGTTCATGTGGTGATGAG 1661
|..||||||||||||||.||.||.||.|||||.||.||.|..||..||||
BL00286___man 1609 TACGAGAAAGGCTATGTGGAAAAAGAATATGCCGTACACGCCGTCTTGAG 1658
BSNT_02035___ 1662 GGAAAAAATGTCGGCGACAAATATTGGATCAGGCATTGCCATTCCTCATG 1711
.||.|||||||||||||||||.||.|||.|.|||||.||.|||||.||.|
BL00286___man 1659 AGAGAAAATGTCGGCGACAAACATCGGAGCGGGCATCGCGATTCCCCACG 1708
BSNT_02035___ 1712 CAAACGCTAAATTTATTAAACAATCAGCAATCGCGATTGCCACATTAAAG 1761
|.|||||.|||||.||||||||||||||.||.|||||.||||||||||||
BL00286___man 1709 CGAACGCCAAATTGATTAAACAATCAGCCATTGCGATCGCCACATTAAAG 1758
BSNT_02035___ 1762 GAGCCGCTTGAATGGGGAAATGAAAAAGTTTCGCTCGTTTTTATGCTGGC 1811
|||||||||||.|||||...|||||||||.||||||||.|||||||||||
BL00286___man 1759 GAGCCGCTTGACTGGGGCTCTGAAAAAGTATCGCTCGTCTTTATGCTGGC 1808
BSNT_02035___ 1812 TGTCAAACACGAGGATCAAACCATGACAAAGCAGCTGTTTAGCGAGCTTT 1861
|||||||||.||||||||||.|||||||||.||..||||....|||||.|
BL00286___man 1809 TGTCAAACATGAGGATCAAAACATGACAAAACAATTGTTCCAAGAGCTGT 1858
BSNT_02035___ 1862 CATATCTT-AGCGAGCAGCCGGCCTTCGTCCAGAAGCTGACGAAAGAAGC 1910
| .|.||| ||||||||||||||||||.||||.|||||||||||||||.|
BL00286___man 1859 C-CAGCTTAAGCGAGCAGCCGGCCTTCATCCAAAAGCTGACGAAAGAAAC 1907
BSNT_02035___ 1911 CAATGTCATGACATTTTTATCTCATTTGGATTATTAA 1947
.|||||.||||..||.||||||.||||||||||||||
BL00286___man 1908 AAATGTGATGAAGTTCTTATCTTATTTGGATTATTAA 1944
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