Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00764 and BL00277
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:24
# Commandline: needle
# -asequence dna-align/BSNT_00764___dctB.1.5803.seq
# -bsequence dna-align/BL00277___dctB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00764___dctB-BL00277___dctB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00764___dctB-BL00277___dctB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00764___dctB
# 2: BL00277___dctB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1297
# Identity: 581/1297 (44.8%)
# Similarity: 581/1297 (44.8%)
# Gaps: 539/1297 (41.6%)
# Score: 1007.5
#
#
#=======================================
BSNT_00764___ 1 ATGAAGAGTTTGCT-TGCATGTCTCGCACTGATGATCGCTGGAATTGCAA 49
||||..|.|.|||| |.|.|||.| .|||.|.
BL00277___dct 1 ATGAGAAATATGCTATCCGTGTTT-------------------TTTGTAT 31
BSNT_00764___ 50 CCGCTTTATTTATTGGATTCCATGATCATACAGGCAATAAAAAGATTGTT 99
.|||||||.|..||||| ||| |.|||.||...|||||..|..|
BL00277___dct 32 GCGCTTTAATCTTTGGA----ATG--CTTACGGGGTGTAAAAGCAGCG-- 73
BSNT_00764___ 100 TATG--ATGACGAACAGGAAGGCCTGCAGGATCAAATCGT---GTTTAAA 144
||| || ||||.| .|||.|||.||| |||
BL00277___dct 74 -ATGTAAT-----------AGGCGT---CGATAAAACCGTAACGTT---- 104
BSNT_00764___ 145 TTCAGCCACGTGGTTGCTGAAAATACGCCAAAAGGGCTGG--CCGCCAAT 192
||| |.|||||.|.|| |||.||.| .|| |..||.||
BL00277___dct 105 -------ACG-GCTTGCTCACAA----CCATAATG--AGGAACACCCCAT 140
BSNT_00764___ 193 ---AAATTCGCTGATTTGGTGAACGAAAA-----ATCAGGCG-GGAAAAT 233
.||.|| ||| ||..||| |..||.|| .|||||.
BL00277___dct 141 CCACAAGTC-----TTT-----ACTCAAATTTTCAAAAGACGTAGAAAAG 180
BSNT_00764___ 234 AAAA--------------ATAG---AAGTATTTCCGAATGGAAGCCTGTA 266
|||| |.|| ||||.|.|||.|||| ||...
BL00277___dct 181 AAAACCAATGGCACCGTTAAAGTGCAAGTGTATCCAAATG-----CTCAG 225
BSNT_00764___ 267 CTCGG------ACATTGAAGAAATTGAAGCATTG---CAAAACGG----- 302
||||| || .|||||..||||| |||| ||.|.|||
BL00277___dct 226 CTCGGTTCAGAAC-GTGAAGTGATTGA---ATTGACACAGACCGGGGCTG 271
BSNT_00764___ 303 -CGAT-------------GTTCAA-------------TTTATC----GCC 321
|||| ||.||| |||.|| |.|
BL00277___dct 272 TCGATCTGGCTAAAGTAAGTGCAAGCGCTTTAGAAAGTTTTTCAGAGGTC 321
BSNT_00764___ 322 CCCTCCA-CATCGAAGCTCGGCATGCTCTCGCCTGAATGGGGAGTGCTGG 370
..||||| |.|| ||||
BL00277___dct 322 TACTCCATCTTC--AGCT-------------------------------- 337
BSNT_00764___ 371 ATCTGCCGTATGCATTT-ACAG--------ATTACAACGCCGTCAAAAAA 411
||||.|||..|||| |||| ||| ||.|..||
BL00277___dct 338 ---TGCCTTATTTATTTGACAGCAAACATCATT---------TCTATGAA 375
BSNT_00764___ 412 GGGCTGAACGGAAGCATCGGCACACAGCTGTTTGATTCTCTAAAGAAAAA 461
|...||.||.|....||.|..|.|.|..|||.||||.| ||.||||||
BL00277___dct 376 GCCATGGACAGTGATATTGCAAAAGAAATGTATGATAC---AACGAAAAA 422
BSNT_00764___ 462 CCAATTAAAAGGACTGGCCTATTGGACGAA------------CGGCTTTA 499
| |.|| ||..|||||||..|| |||..|||
BL00277___dct 423 C------ATAG----GGTTTATTGGATTAACCTACTATGATGCGGGATTA 462
BSNT_00764___ 500 AGCAAAT----CAC----AACAAATCAAGGGCCGGT--------CAAAAC 533
.|.||.| ||| |||||| |||.| ||||..
BL00277___dct 463 CGGAACTTTTACACAAAGAACAAA-------CCGATTATGCACCCAAATG 505
BSNT_00764___ 534 ACC-----GGATGATTTAAAA------GGGCAGGATCTGCGCATTATGC- 571
||| || ||||||| |.|||| |.|.| |||
BL00277___dct 506 ACCTTAAAGG----TTTAAAAATTCGGGTGCAG---CCGAG-----TGCT 543
BSNT_00764___ 572 AAAGCGATGTG-ATTGAGGATCAGTTCAAGCTGCTTGGCGCAACACCTCA 620
|.||||||..| ||.|.|||.| ||| ||..|||.|||.|..|||
BL00277___dct 544 ACAGCGATTCGAATGGTGGAAC---TCA---TGGGTGGAGCACCTACTC- 586
BSNT_00764___ 621 TCA--GGAATCCTT-----CAATTCTACCTTTCAGCTGTTAGAAAACAA- 662
|| || ||| .||.|.|| |.|||| .|.|.|..|||
BL00277___dct 587 -CAATGG----CTTATGGAGAAGTATA---TACAGC--ATTGCAGTCAAG 626
BSNT_00764___ 663 TGTAGTCGATGGCGAAGAAAATACAA---------TTT--CAAACATCTA 701
||||.||||||||...|||| |||| ||| |||.||.|.|
BL00277___dct 627 TGTAATCGATGGCACCGAAA--ACAACGAAATGGCTTTAACAAGCAGCAA 674
BSNT_00764___ 702 T------------TCTAAAAAAT-TTTATAAT--------------GTTC 724
| .|.|||.||| ||.|||.| ||||
BL00277___dct 675 TCACGGGGAGGTGGCAAAAGAATATTCATACTCAGAACATGCAATCGTTC 724
BSNT_00764___ 725 AGGACTATTT--------------GACAATAAGCAGCCACGGTTACCTCG 760
.||| ||||| |||||.|||
BL00277___dct 725 CGGA-TATTTTGATCATGAATTTGGACAAAAAG----------------- 756
BSNT_00764___ 761 GCTACGCTGTCATGACTGATGAACACTTCTGGAAGGCGCA-AACACCAGA 809
||.||.|| |.|||.| ||||.||||
BL00277___dct 757 --------------------GATCAATT-----AAGCGAAGAACAGCAGA 781
BSNT_00764___ 810 AACAAGACGCATTT----TGACTGAAGCGATGAAGGAGACGACGGAGTGG 855
| | |||..||||||..|||.|||.|.||.||||..
BL00277___dct 782 A------------TGCGGTGATCGAAGCGGCGAAAGAGTCTACTGAGTAT 819
BSNT_00764___ 856 AATGAAA-CGTAT--GCCGAACAAA-TGAACAAGGAGCAGCTGGAAGAAA 901
.|..||| |||.| ||.|||.||| ||||.| .||.|.|| |||||
BL00277___dct 820 CACAAAATCGTTTGGGCTGAAGAAACTGAAAA---TGCGGTTG--AGAAA 864
BSNT_00764___ 902 TCAA---AAA-------GAA-TTCTGCTATACATATTTATGAGCTGTCAG 940
.||| ||| ||| ||| ||.| ||| |||
BL00277___dct 865 GCAAAGGAAATGGGAGTGAAGTTC-------CACA------AGC---CAG 898
BSNT_00764___ 941 ATAAAGAGAAACAAGAAT--------GGATG----AA----GCGTCTTGA 974
||||||.| ||||| || ||.||.|||
BL00277___dct 899 ----------ACAAGACTCCATTCCGGGATGCGGTAAGCCCGCTTCATGA 938
BSNT_00764___ 975 CCCTGTTTACCGGCAGTATGAGCCCATCTTCGGGCGG-----GAGCTGAT 1019
|| |||.|| ||| ||..||||
BL00277___dct 939 ---TG---------AGTTTG---CCA-----------AAAAAGAATTGAT 962
BSNT_00764___ 1020 CCGGAA---ACTGTTGG----------AGCTGCGAAAAGATTCATAG 1053
||||| |||.|.|| |||| ||||.|.|.|
BL00277___dct 963 -CGGAAAATACTATAGGGAAATTCGAAAGCT---AAAAAAGTAA--- 1002
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