Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05163 and BL00266
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence dna-align/BSNT_05163___yvfL.1.5803.seq
# -bsequence dna-align/BL00266___yvfL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05163___yvfL-BL00266___yvfL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05163___yvfL-BL00266___yvfL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05163___yvfL
# 2: BL00266___yvfL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1257
# Identity: 950/1257 (75.6%)
# Similarity: 950/1257 (75.6%)
# Gaps: 0/1257 ( 0.0%)
# Score: 3522.0
#
#
#=======================================
BSNT_05163___ 1 GTGCAGCATCGTCAAGTCGCTTTGTTGCTTTCTATCATTCCGGGACTCGG 50
|||||||||||..||...|||||..|..|.||.||.|||||.||.||.||
BL00266___yvf 1 GTGCAGCATCGCAAAAAAGCTTTACTATTATCAATTATTCCCGGTCTGGG 50
BSNT_05163___ 51 GCAATTTTATAACAAGCAATGGATAAAAGGTATTGTCTTTCTTTTCTTAG 100
.|||||.||.||.||.|||||||||||.|||.|..|.||.|||.|.||||
BL00266___yvf 51 CCAATTCTACAATAAACAATGGATAAAGGGTCTGTTATTCCTTCTTTTAG 100
BSNT_05163___ 101 GCGCATCGTTTTTTGCGGTCTTTGGAGATCTGCTCAATATGGGGTTTTGG 150
|||..|||||.||||||||.|||||.|||.||||.|||||||||.|.|||
BL00266___yvf 101 GCGTCTCGTTCTTTGCGGTTTTTGGCGATTTGCTGAATATGGGGCTGTGG 150
BSNT_05163___ 151 GGAATCTTTACACTGGGAACAGAAGTGCCGCGGGATAATTCCGTTTTTCT 200
||..|.|||||.||.|||||.|||||||||||.||.||.||..|||||||
BL00266___yvf 151 GGCCTGTTTACGCTTGGAACCGAAGTGCCGCGCGACAACTCGATTTTTCT 200
BSNT_05163___ 201 GCTGGCGGAAGGGATTATTGCTGTCATCGTGACCTGCTTTGGCCTTGCGG 250
..||||..||||.|||||||||||.||.||.|||||.|||||.||.||.|
BL00266___yvf 201 ATTGGCAAAAGGCATTATTGCTGTGATTGTCACCTGTTTTGGGCTGGCTG 250
BSNT_05163___ 251 TGTATTATGTAAATCTTCGCGATGCGTTCCAAAGCGGAAAACAACGTGAT 300
|.|||||.|..|||.|.||.||.||.|.|||||.||||||....||.|||
BL00266___yvf 251 TCTATTACGCCAATTTGCGGGACGCCTACCAAAACGGAAAGAGGCGCGAT 300
BSNT_05163___ 301 GAAAATAAGCCATTAAGTTCCTTAAAGGAACAATACCAGCATATCATTTC 350
|||.|.|||....|.|||||..|.|||||||||||.||..||.|.||..|
BL00266___yvf 301 GAACAAAAGGAGCTCAGTTCACTCAAGGAACAATATCATAATTTAATAGC 350
BSNT_05163___ 351 TGAGGGCTATCCTTATGTCGTCAGCGGCCCATCTTTGTTTATTTTAATTT 400
|.||||.|||||.|||.||.|||||||.|||||..||||.||..|..|||
BL00266___yvf 351 TCAGGGATATCCGTATCTCATCAGCGGGCCATCGCTGTTCATCCTGGTTT 400
BSNT_05163___ 401 TCGCCGTGATCTTTCCTATCTTATTCAGCTTTGCATTAGCGTTTACAAAC 450
|.|||||..|.|||||.||.||.|||||||||||||||||.|||||||||
BL00266___yvf 401 TTGCCGTTGTTTTTCCGATTTTGTTCAGCTTTGCATTAGCTTTTACAAAC 450
BSNT_05163___ 451 TATGATTTGTATCATTCTCCTCCTGCAAAATTAATTGATTGGGTCGGTTT 500
|||.|..|.||.||||||||.|||||.....|..|.||||||||.||..|
BL00266___yvf 451 TATAACCTCTACCATTCTCCGCCTGCCCGCCTTGTCGATTGGGTAGGAAT 500
BSNT_05163___ 501 TCAAACGTTCGCAAATATTTTCACAGTTGATATTTGGAGGTCGACTTTTT 550
|.|||||||..|..|.||||||||.||||||||||||.|||||||.||||
BL00266___yvf 501 TAAAACGTTTTCCGAAATTTTCACCGTTGATATTTGGCGGTCGACCTTTT 550
BSNT_05163___ 551 TTGATGTACTGGCTTGGACGGTGGTTTGGACACTTGCTGCATCCACACTG 600
|.|||||..|.||||||||..|.||||||||.||||..||.|||||.||.
BL00266___yvf 551 TGGATGTTTTAGCTTGGACCATTGTTTGGACGCTTGTCGCTTCCACGCTC 600
BSNT_05163___ 601 CAAGTCACATTGGGGATTTTTCTCGCGATCATTGTTAACCAGAAAGACCT 650
||||||...|||||.|||||..|.|||.|..|.||.||.|||||.||..|
BL00266___yvf 601 CAAGTCGGGTTGGGAATTTTGTTGGCGGTTGTCGTCAATCAGAAGGAAGT 650
BSNT_05163___ 651 TCGGTTTAAACGTTTTTTTCGGACGATTCTGATTTTGCCATGGGCCGTTC 700
.||.||||||....||||.|||||||||||..|.|||||.||||||||.|
BL00266___yvf 651 CCGCTTTAAAAAAATTTTCCGGACGATTCTTGTCTTGCCTTGGGCCGTGC 700
BSNT_05163___ 701 CCGGTTTTGTGACGATTTTAATTTTTGCGGGACTGTTTAATGATAGCTTC 750
||||||||||.||.|||.|..|.|||||.||.||.||||||||.||||||
BL00266___yvf 701 CCGGTTTTGTTACCATTCTCGTGTTTGCCGGCCTTTTTAATGACAGCTTC 750
BSNT_05163___ 751 GGTGCGATGAATCACGACATCTTGGCTTTCTTCGGGATAGATCCGCTTCC 800
|||||..|.|||||..|.|||.|.||....|||||.||.||||||.||||
BL00266___yvf 751 GGTGCTTTCAATCATCAAATCCTCGCCGCATTCGGCATCGATCCGATTCC 800
BSNT_05163___ 801 GTGGATGACAGATGCCAATTGGTCGAGGCTTGCATTGATTCTCATGCAGG 850
.||||||||..|||||||||||.|||.|||.||..|.|||||.|||||||
BL00266___yvf 801 TTGGATGACGAATGCCAATTGGACGAAGCTGGCGCTTATTCTTATGCAGG 850
BSNT_05163___ 851 GCTGGCTTGGATTTCCGTACATCTTTCTCGTCTCAACAGGCGTATTGCAA 900
|||||||.|||||||||||..|.||..|.||..||||.||.||..||||.
BL00266___yvf 851 GCTGGCTCGGATTTCCGTATGTGTTCATTGTAACAACCGGTGTTCTGCAG 900
BSNT_05163___ 901 TCCATCCCGGACGATCTGTATGAAGCAGCTACGATTGATGGCGCTTCTGT 950
||.||.|||||.||.||.||||||||.||.||||||||.||.||.||||.
BL00266___yvf 901 TCGATTCCGGATGACCTTTATGAAGCGGCGACGATTGACGGAGCGTCTGC 950
BSNT_05163___ 951 CTTTTCAAAGTTGAGATACATCACGCTTCCAATGGTGTTCATTGCAATGG 1000
.|||||.||.||.||..|.||.||.||.||..||.|.||.||.||.||||
BL00266___yvf 951 GTTTTCGAAATTCAGGCATATTACACTGCCGCTGATTTTAATCGCGATGG 1000
BSNT_05163___ 1001 CTCCGATTATCATTACCCAGTTTACGTTTAATTTTAATAACTTTAATATT 1050
|.||||||||||||||.||.||.||.|||||||||||||||||.||||||
BL00266___yvf 1001 CGCCGATTATCATTACGCAATTCACTTTTAATTTTAATAACTTCAATATT 1050
BSNT_05163___ 1051 ATCTATCTATTCAATGGTGGAGGTCCGGCTGTAACCGGATCAACAGCCGG 1100
||.||||||||||||||.||.|||||||||||..||||.||||||||.||
BL00266___yvf 1051 ATTTATCTATTCAATGGAGGCGGTCCGGCTGTTCCCGGGTCAACAGCGGG 1100
BSNT_05163___ 1101 CGGGACAGATATCCTCGTTTCATGGATTTATAAATTGACAATGCAGTCCA 1150
.||.||.||.|||||.||.||.||||||||.||||||||.||||||||.|
BL00266___yvf 1101 AGGAACCGACATCCTGGTGTCCTGGATTTACAAATTGACGATGCAGTCGA 1150
BSNT_05163___ 1151 GTCAATATTCTCTTGCTGCGGCTTTAACCATTTTATTATCTGTATTTGTT 1200
|.||.||.|||.|.||.||.||.||.||.||..|..|.||.||.|||||.
BL00266___yvf 1151 GCCAGTACTCTTTAGCCGCCGCATTGACGATCCTGCTGTCGGTCTTTGTC 1200
BSNT_05163___ 1201 ATCTCCATCGCATTGTGGCAATTCAGACAGACAAAGTCTTTTAAAGAGGG 1250
|||||.||.|||.|||||||.|||||||.||||||.|||||.||||||||
BL00266___yvf 1201 ATCTCAATTGCACTGTGGCAGTTCAGACGGACAAATTCTTTCAAAGAGGG 1250
BSNT_05163___ 1251 GGCATAA 1257
|||.|||
BL00266___yvf 1251 GGCTTAA 1257
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