Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05161 and BL00264
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:16
# Commandline: needle
# -asequence dna-align/BSNT_05161___lacA.1.5803.seq
# -bsequence dna-align/BL00264___lacA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05161___lacA-BL00264___lacA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05161___lacA-BL00264___lacA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05161___lacA
# 2: BL00264___lacA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2121
# Identity: 1544/2121 (72.8%)
# Similarity: 1544/2121 (72.8%)
# Gaps: 126/2121 ( 5.9%)
# Score: 5530.0
#
#
#=======================================
BSNT_05161___ 1 ATGTCAAAGCTTGAAAAAACGCACGTAACAGAAGCGAAATTTATGCTCCA 50
|||.||||..||.|.|..||.| ||||.|.||..|||||.||
BL00264___lac 1 ATGCCAAAAATTTATACGACCC---------AAGCAAGATACATGCTTCA 41
BSNT_05161___ 51 TGGGGGAGACTACAACCCCGATCAGTGGCTGGATCGGCCCGATATTTTAG 100
.||||||||||||||.||.|||||||||||.||.||.||.||||||.|.|
BL00264___lac 42 CGGGGGAGACTACAATCCGGATCAGTGGCTTGACCGTCCGGATATTCTTG 91
BSNT_05161___ 101 CTGACGATATCAAACTGATGAAGCTTTCTCATACGAATACGTTTTCTGTC 150
|.||.||.|||||.||||||||||||.|.|||||||||||.|||||.||.
BL00264___lac 92 CAGATGACATCAAGCTGATGAAGCTTGCCCATACGAATACATTTTCAGTG 141
BSNT_05161___ 151 GGCATTTTTGCATGGAGCGCACTTGAGCCGGAGGAGGGCGTATATCAATT 200
||.||||||.||||||||||.||||||||||||||.|||||.|||...||
BL00264___lac 142 GGGATTTTTTCATGGAGCGCCCTTGAGCCGGAGGAAGGCGTCTATACGTT 191
BSNT_05161___ 201 TGAATGGCTGGATGATATTTTTGAGCGGATTCACAGTATAGGCGGCCGGG 250
|||||||||||||||||||||||||.|.||||||.|.|..|||||||||.
BL00264___lac 192 TGAATGGCTGGATGATATTTTTGAGAGCATTCACCGGAACGGCGGCCGGA 241
BSNT_05161___ 251 TCATATTAGCAACGCCGAGCGGAGCCCGTCCGGCCTGGCTGTCGCAAACC 300
|.|||||.||.||.||||||||.||||||||.||.|||||||||||||..
BL00264___lac 242 TTATATTGGCGACACCGAGCGGCGCCCGTCCTGCTTGGCTGTCGCAAAAG 291
BSNT_05161___ 301 TATCCGGAAGTTTTGCGCGTCAATGCCTCCCGCGTCAAACAGCTGCACGG 350
|||||||||||..|||||||.|||||....||||||||||||||||||||
BL00264___lac 292 TATCCGGAAGTGCTGCGCGTGAATGCTGAACGCGTCAAACAGCTGCACGG 341
BSNT_05161___ 351 CGGAAGGCACAACCACTGCCTCACATCTAAAGTCTACCGAGAAAAAAC-- 398
||||||||||||.||.|||.||||.||..|.||.|||||.||||||||
BL00264___lac 342 CGGAAGGCACAATCATTGCTTCACTTCATACGTATACCGTGAAAAAACGA 391
BSNT_05161___ 399 ACGGCACATCAACCGCTTATTAGCAGAACGATACGGACA-TCACCCGGCG 447
|.| |.|||||||||.|..|.||.|||.|.||||| || .||.|..||.
BL00264___lac 392 AAG--AGATCAACCGCATGCTGGCTGAAAGGTACGG-CAGCCAGCATGCC 438
BSNT_05161___ 448 CTGTTAATGTGGCACATTTCAAACGAATACGGGGGAGATTGCCACTGTGA 497
||.||.||||||||..||||.|||||||||||.|||||.|||||.|||||
BL00264___lac 439 CTTTTGATGTGGCATGTTTCCAACGAATACGGAGGAGAATGCCATTGTGA 488
BSNT_05161___ 498 TCTATGCCAGCATGCTTTCCGGGAGTGGCTGAAATCGAAATATGACAACA 547
||.|||.|||||.||.|||.|.||.|||||||||..|||.| |||||
BL00264___lac 489 TCAATGTCAGCACGCCTTCAGAGACTGGCTGAAAAAGAAGT---ACAAC- 534
BSNT_05161___ 548 GCCTCAAGA--------CATTGAACCAGGCGTGGTGGACCCCTTTTTGGA 589
||.|| |.|||||..|.||.||||||||.||||||||||
BL00264___lac 535 ----CATGATATTAAATCTTTGAATGACGCATGGTGGACGCCTTTTTGGA 580
BSNT_05161___ 590 GCCATACGTTCAATGACTGGTCACAAATTGAAAGCCCTTCGCCGATCGGT 639
||||.||.|||||.||.||||||||.||||||...||.||.||||||||.
BL00264___lac 581 GCCACACCTTCAACGATTGGTCACAGATTGAATCGCCGTCTCCGATCGGG 630
BSNT_05161___ 640 GAAAATGGCTTGCATGGCCTGAATTTAGATTGGCGCCGGTTCGTCACCGA 689
|||||||...||||.|||.||||||||||.|||||.||.||||||||.||
BL00264___lac 631 GAAAATGCGGTGCACGGCTTGAATTTAGACTGGCGACGCTTCGTCACTGA 680
BSNT_05161___ 690 TCAAACGATTTCGTTTTATAAAAATGAAATCATTCCGCTGAAAGAATTGA 739
.||.|||||.||.||||.|.|||||||||||.|||||.|.||.|||.|.|
BL00264___lac 681 CCAGACGATCTCTTTTTTTCAAAATGAAATCGTTCCGTTAAAGGAAATCA 730
BSNT_05161___ 740 CGCCTGATATCCCTATCACAACGAATTTTATGGCTGATACACCGGATTTG 789
||||..||||.||.||.||.||.|||||||||||.||.||.|..|||||.
BL00264___lac 731 CGCCGAATATTCCGATTACGACCAATTTTATGGCGGACACGCATGATTTA 780
BSNT_05161___ 790 ATCCCGTATCAGGGCCTCGACTACAGCAAATTTGCAAAGCATGTCGATGT 839
||.||||.|||.||.||.|||||||||||.|||||.|||||..|.||.||
BL00264___lac 781 ATTCCGTTTCAAGGGCTGGACTACAGCAAGTTTGCCAAGCACCTGGACGT 830
BSNT_05161___ 840 CATCAGCTGGGACGCTTATCCTGTCTGGCACAATGACTGGGAAAGCACAG 889
.||||||||||||||.|||||.|.|||||||||.||.|||||||||||||
BL00264___lac 831 GATCAGCTGGGACGCGTATCCCGCCTGGCACAACGATTGGGAAAGCACAG 880
BSNT_05161___ 890 CTGATTTGGCGATGAAGGTCGGCTTTATCAATGATCTGTACCGAAGCTTG 939
|.||||||||.|||||.||||||||||||||||||.|||||||.|||.||
BL00264___lac 881 CAGATTTGGCCATGAAAGTCGGCTTTATCAATGATTTGTACCGCAGCCTG 930
BSNT_05161___ 940 AAGCAGCAGCC-TTTCTTATTAATGGAGTGTACGCCAAGCGCGGTCAATT 988
||.|||||||| |||| |.||||||||.|..|||||||||||.|||||||
BL00264___lac 931 AAACAGCAGCCGTTTC-TCTTAATGGAATCGACGCCAAGCGCTGTCAATT 979
BSNT_05161___ 989 GGCATAACGTCAACAAGGCAAAGCGCCCGGGCATGAATCTGCTGTCATCC 1038
||||..|..|.||.||.||.||.||.|||||||||.|.||.|||||.||.
BL00264___lac 980 GGCACGATTTTAATAAAGCGAAACGGCCGGGCATGCACCTCCTGTCTTCT 1029
BSNT_05161___ 1039 ATGCAAATGATTGCCCACGGCTCGGACAGCGTTCTCTATTTCCAATACCG 1088
.||||.|||||.||.|||||.||.||||||.|.||||||||.||||..||
BL00264___lac 1030 GTGCAGATGATCGCACACGGATCTGACAGCATCCTCTATTTTCAATGGCG 1079
BSNT_05161___ 1089 CAAATCACGAGGGTCATCAGAAAAATTACACGGAGCGGTTGTGGATCATG 1138
.|||||.||.||.|||||.||||||||.||.||.||||||||.|..||||
BL00264___lac 1080 GAAATCCCGCGGCTCATCGGAAAAATTTCATGGTGCGGTTGTCGGCCATG 1129
BSNT_05161___ 1139 ACAATAG-CCCGAAGAACCGCGTCTTTCAAGAAGTGGCCAAGGTAGGCGA 1187
|||||.| .||| ||||||||||.|||.||||||||||.||.||.||..|
BL00264___lac 1130 ACAATTGTTCCG-AGAACCGCGTGTTTAAAGAAGTGGCAAAAGTCGGGCA 1178
BSNT_05161___ 1188 GACATTGGAACGGCTGTCCGAAGTTGTCGGAACGAAGAGGACGGCTCAAA 1237
.||..|.|||..||||||.|||||...||||||||...||.|.||..|..
BL00264___lac 1179 AACCCTTGAAGCGCTGTCTGAAGTCACCGGAACGATCCGGCCTGCGGATG 1228
BSNT_05161___ 1238 CCGCGATTTTATATGACTGGGAAAATCATTGGGCGCTCGAGGATGCTCAG 1287
.|||||||.|.||.||.||||||||.||||||||||||.|.|||||.||.
BL00264___lac 1229 TCGCGATTCTCTACGATTGGGAAAACCATTGGGCGCTCCAAGATGCACAA 1278
BSNT_05161___ 1288 GGGTTTGCGAAGGCGACAAAACGTTATCCGCAAACGCTTCAGCAGCATTA 1337
||.||.|.||.|...||.||.||.|||||.|||||.||.||..||||.||
BL00264___lac 1279 GGATTCGGGATGAAAACCAAGCGGTATCCCCAAACCCTGCACGAGCACTA 1328
BSNT_05161___ 1338 CCGCACATTCTGGGAACACGATATCCCTGTCGACGTCATCACGAAAGAAC 1387
||||.|.||.|||||.|..|||||.||.||||||||.||.|||||.||||
BL00264___lac 1329 CCGCGCGTTTTGGGAGCGTGATATTCCAGTCGACGTGATTACGAAGGAAC 1378
BSNT_05161___ 1388 AAGACTTTTCACCATATAAACTGCTGATCGTCCCGATGCTGTATTTAATC 1437
|.||.||||||.|.||....|||||||||||.||||||||.||.|||...
BL00264___lac 1379 AGGATTTTTCATCGTACCGGCTGCTGATCGTTCCGATGCTTTACTTAGCA 1428
BSNT_05161___ 1438 AGCGAGGACACCATTTCCCGTTTAAAAGCGTTTACGGCTGATGGCGGCAC 1487
|||||.||.||.||..|.||.|||||.||.|||.|.||..|.||.|||||
BL00264___lac 1429 AGCGAAGAAACAATCGCGCGCTTAAAGGCATTTGCTGCCAACGGGGGCAC 1478
BSNT_05161___ 1488 CTTAGTCATGACGTATATCAGCGGGGTTGTGAATGAGCATGACTTAACAT 1537
.||.||.|||||.|||||.|||||..|.||.||.||...|||..|.||.|
BL00264___lac 1479 ATTGGTGATGACCTATATTAGCGGAATCGTCAACGAATCTGATCTGACCT 1528
BSNT_05161___ 1538 ACACAGGCGGATGGC----ATCCGGATCTTCAAGCTATATTTGGAGTTGA 1583
|...||||||||||| | |||||.||||..||.|||||..|.||
BL00264___lac 1529 ATTTAGGCGGATGGCCAAAA----GATCTGCAAGAGATGTTTGGCATGGA 1574
BSNT_05161___ 1584 GCCTCTTGAAACGGACACCCTGTATCCGAAGGATCGAAACGCTGTCAGCT 1633
||||.|||||||.||.||.||.||||||...|||..|||.||.|||.|.|
BL00264___lac 1575 GCCTGTTGAAACCGATACACTCTATCCGGGCGATAAAAATGCGGTCCGTT 1624
BSNT_05161___ 1634 ACCGCAGCCAAATA-------TATGAAATGAAGGATTATGCAACCGTGAT 1676
|.| ||.| |||||..||||.|||||.||.||||||.|
BL00264___lac 1625 ATC-------AAAACCGGTCGTATGAGCTGAAAGATTACGCGACCGTGCT 1667
BSNT_05161___ 1677 TGATGTAAAGACAGCTTCAGT--GGAAG----CG-----GTGTATCAAGA 1715
|| ||| ||||| ||.|| || .|.|||.|.||
BL00264___lac 1668 ---------GA-AGC-TCAGTACGGCAGATCCCGAGGGATTCTATGAGGA 1706
BSNT_05161___ 1716 AGATTTTTATGCGCGCACGCCAGCGGTCACAAGCCATGAGTATCAGCAGG 1765
.||.|||||||||..||||.|.||.||.||.||||||...||..|.||||
BL00264___lac 1707 CGACTTTTATGCGGACACGACGGCTGTGACGAGCCATCCATACAAACAGG 1756
BSNT_05161___ 1766 GCAAGGCGTATTTTATCGGCGCGCGTTT--GGAGGATCAATTTCAGCGTG 1813
|.||..||||||.||||||.|||||||| |.|| .||||||||.||.|
BL00264___lac 1757 GGAAAACGTATTATATCGGTGCGCGTTTAAGCAG--CCAATTTCATCGGG 1804
BSNT_05161___ 1814 ATTTCTATGAGGGTC--TGATCACAGACCTGTCTCTTTCTCCAG---TTT 1858
||||.||| ||..| ||||.|.|||.|| || ||.
BL00264___lac 1805 ATTTTTAT--GGAACATTGATTAAAGAGCT------------AGCGATTC 1840
BSNT_05161___ 1859 TTCCGGTTCGGCACGGAAAA---------GGCGTCTCCGTACAAGCGAGG 1899
..||||.||...|||..||| |||||||||||.||||..||.
BL00264___lac 1841 AACCGGCTCTTGACGTGAAACATCAGCCTGGCGTCTCCGTTCAAGTCAGA 1890
BSNT_05161___ 1900 CAGGATCAGGACAATGATTATATTTTTATCATGAATTTCACGGAAGAAAA 1949
||||||.||||.|||||.||||||||.||||||||||||||||||.||..
BL00264___lac 1891 CAGGATGAGGAAAATGACTATATTTTCATCATGAATTTCACGGAAAAACG 1940
BSNT_05161___ 1950 ACAGCTGGTCACGT-TTGATCAGAGT-----GTGAAGGACATAATGACAG 1993
.||||..|| ||| ||| |.|| ||.||.||.||..||||.|
BL00264___lac 1941 TCAGCCCGT--CGTGTTG----GCGTCGGCAGTTAAAGATATGCTGACCG 1984
BSNT_05161___ 1994 GAGACATATTGTCAGGCGACCTGACGATGGAAAAGTATGAAGTGAGAATT 2043
||||.|...||.|.|||||..|.||..|||||||.|||||.|..|||||.
BL00264___lac 1985 GAGAAACGCTGGCCGGCGAAGTCACATTGGAAAAATATGAGGCCAGAATA 2034
BSNT_05161___ 2044 GTCGTAAA---CACACATTAG 2061
|..||||| .|.|.|.|||
BL00264___lac 2035 GCGGTAAAAGCAAAAGAATAG 2055
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