Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01391 and BL00255
See
Amino acid alignment /
Visit
BSNT_01391 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence dna-align/BSNT_01391___yfiQ.1.5803.seq
# -bsequence dna-align/BL00255___yfiQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01391___yfiQ-BL00255___yfiQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01391___yfiQ-BL00255___yfiQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01391___yfiQ
# 2: BL00255___yfiQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1161
# Identity: 783/1161 (67.4%)
# Similarity: 783/1161 (67.4%)
# Gaps: 144/1161 (12.4%)
# Score: 2508.0
#
#
#=======================================
BSNT_01391___ 1 ATGCAAATTAAAGAAATTTTTATGATCCGCTGCGTTTCGTGCTTAAGTGT 50
.|||||.|.||||||||||||.|.||.||||||.|.||.||.|||||.||
BL00255___yfi 1 TTGCAAGTAAAAGAAATTTTTGTCATTCGCTGCATCTCCTGTTTAAGCGT 50
BSNT_01391___ 51 CGTCTTGCTCCATATCATTTCAATGGTCCTGATGCTTCAGGC--AGAAGC 98
.||.|||||.|||...||.||||||||.||.|||.|.|.||| |.|.||
BL00255___yfi 51 TGTTTTGCTTCATGCGATATCAATGGTGCTCATGGTGCGGGCGGACATGC 100
BSNT_01391___ 99 TCTTGCAGAT----ATTTCTCACAC----TGTTGATTCTTTCCGCACACT 140
|| |.|||| .|||| | ||||||.||||||.|.||.||
BL00255___yfi 101 TC--GGAGATGCGGTTTTC-----CGGGTTGTTGAATCTTTCAGAACGCT 143
BSNT_01391___ 141 CCTGATGTTCAGCACGCCCGCTTTTATTTTCATCTCTGAATTTTTACTGG 190
||||||||||||.|||||.||.|||||||||||.||.||||||||.||.|
BL00255___yfi 144 CCTGATGTTCAGTACGCCGGCGTTTATTTTCATTTCCGAATTTTTGCTCG 193
BSNT_01391___ 191 CCCGTTCTTATCCTGATGGGGTGCCTGACGGTTTTTTAAAGAAGCGGGGA 240
|.|.|.|.|||||||.|||.||.||.||.||.||||||||.||||||...
BL00255___yfi 194 CGCATGCCTATCCTGGTGGTGTTCCGGAAGGGTTTTTAAAAAAGCGGTTT 243
BSNT_01391___ 241 AAAGTGATTTTTGTTCCTTTTTTATTTATCGCGGCCATCGATG------- 283
|||...|||||..|.||||||.||||||||||.|...|.||||
BL00255___yfi 244 AAAACAATTTTCATCCCTTTTCTATTTATCGCTGTTTTGGATGCTTTTAT 293
BSNT_01391___ 284 ---CGCTG--CTGATGACCAGTGCGATGGGGGGAGAGGTAACCTTTC--- 325
|||.| ||||||| ||| .|.|| ||||
BL00255___yfi 294 GACCGCAGGTCTGATGA----TGC------------AGCAA--TTTCATG 325
BSNT_01391___ 326 --TCGCGT--TTGTGCAAAAA-TATCTGGCGAACGTATTCTTAGGAAACT 370
||| || ||.|..||||| |.| |||||||..|||||||.||.||.|
BL00255___yfi 326 CATCG-GTCATTATTAAAAAACTGT-TGGCGAATATATTCTTGGGGAATT 373
BSNT_01391___ 371 TTATCGGATACTTCATTCTCGTCATCTTTCAATTTTACATGCTGCATATG 420
|.|||||.|||||||||||||||||.||||||||||||.|||||||.|||
BL00255___yfi 374 TCATCGGTTACTTCATTCTCGTCATTTTTCAATTTTACTTGCTGCACATG 423
BSNT_01391___ 421 ATG-TTTCATGAGTACTTGAAAAAAGCATCGCCGAAATGGGTGCTGTCTA 469
|| ||.|||...|..|||.||||.||.|||||.|||||||||||.||.|
BL00255___yfi 424 -TGCTTCCATTCATTTTTGCAAAAGGCTTCGCCTAAATGGGTGCTTTCGA 472
BSNT_01391___ 470 TCTCATTTGTGGTGACAGCCGCTTATTTAGGCTATTTCTCCG--CAGCCA 517
|.||.||||.|||.|||||.||||||||..|||||||| .|| ||..||
BL00255___yfi 473 TTTCTTTTGCGGTCACAGCGGCTTATTTGAGCTATTTC-ACGTTCATTCA 521
BSNT_01391___ 518 GCCCGGCTCCTGCTTC--TGAAGAGGGCGGGGCATTTCCGTTCTTC-TGG 564
.| ||||.| || |.|.||||..|.|.|.||||| ||.||| |||
BL00255___yfi 522 AC----CTCCGG--TCGTTCAGGAGGAGGCGCCGTTTCC-TTTTTCGTGG 564
BSNT_01391___ 565 GTTCCGTTCGCAGGCTGGCTTTTCTACTTTTGTCTAGCCTACTATTGCGG 614
||.|||||..|.||||||||.||.|||||||||.|.|||||.||||||||
BL00255___yfi 565 GTGCCGTTTCCCGGCTGGCTCTTTTACTTTTGTTTGGCCTATTATTGCGG 614
BSNT_01391___ 615 AAAAGAA-TACAAGCGTTTTTTAGCGCTGCTGAACCAATACCGCTGGGTG 663
.||||| |||.||||.|||||.||..|||||.|.|..|||.|....|.|
BL00255___yfi 615 -CAAGAATTACGAGCGCTTTTTGGCATTGCTGGAACGGTACAGGCATGCG 663
BSNT_01391___ 664 GTGTA--CGGCGCCGCAATTGCTTCTGGGGC--GCTG----GTTGTCACT 705
||||| ||||| |||.|||.|.| |.|| .||||..|.
BL00255___yfi 664 GTGTATGCGGCG--------GCTGCTGTGACCGGATGTTTCATTGTAGCG 705
BSNT_01391___ 706 GTTTCTTATGTCGG---TGAAATCGGCATGA--TCAGCTCGAAGCGGCCT 750
|||||.||..|||| .||.||||...||| ||| |||||.||.
BL00255___yfi 706 GTTTCCTACTTCGGCCAAGACATCGCGGTGACGTCA-----AAGCGTCCG 750
BSNT_01391___ 751 GATATCATGCTGTATTCAACAAGCATGATTTTCCTGTGTTTTCACTTGTT 800
||||||.||||.|||||.||||||||.||||||.|.||.||.|||.||||
BL00255___yfi 751 GATATCCTGCTTTATTCGACAAGCATCATTTTCTTATGCTTCCACCTGTT 800
BSNT_01391___ 801 TTCCAAAATGAAGCATGTGCCGAAAATCATGATGTTTATCAGCAACTATT 850
|||.|||.|||||...||.|||||..|.||.|||.|.|||||||||||||
BL00255___yfi 801 TTCAAAACTGAAGTCGGTACCGAAGCTGATTATGATGATCAGCAACTATT 850
BSNT_01391___ 851 CCTTTTCGATTTATCTGCTTCATGCCTATTTTA---TGATTATAGGCTAC 897
|.|||||.||||||.|.||.||.|| ||||| ||||| |.|
BL00255___yfi 851 CTTTTTCTATTTATTTACTGCACGC---TTTTATCCTGATT------TTC 891
BSNT_01391___ 898 GTGTTG-----CTT--------TTGA----ATATGCCCGAAATTCCTGCC 930
|.|||| ||| |||| ||..| |.|.
BL00255___yfi 892 GGGTTGGTCATCTTAACCGCCCTTGACAGCATCGG-----------TACG 930
BSNT_01391___ 931 GTACCGGCTGTTCTCCTGCTGTTTGCCGTGTGTACAGCCGGCCCGATTCT 980
|||.||||||||.|.||..|||||..|.|.|.|||||.||...||.||.|
BL00255___yfi 931 GTATCGGCTGTTTTGCTTTTGTTTTTCATTTCTACAGGCGCTGCGGTTTT 980
BSNT_01391___ 981 GACCTCGTGGGCACTGAATAAATTCAAATACGGGTATTTATTTGTGGGGA 1030
.|..||.|||||..|.||||||||.||.|||||.|||.|.|||||.||.|
BL00255___yfi 981 CATATCCTGGGCCGTCAATAAATTGAAGTACGGCTATATGTTTGTCGGAA 1030
BSNT_01391___ 1031 AAATTTATCAGCC--AAAACAGAAGAAGGTAACAGTCGAAGTGCGTGATC 1078
||||||||..||| ||||.||..|||.|.|.|| ..|||||||..|||
BL00255___yfi 1031 AAATTTATGTGCCGAAAAAGAGGCGAATGGAGCA--AAAAGTGCGCCATC 1078
BSNT_01391___ 1079 ACGCAGGGTGA 1089
|.|||||.|.|
BL00255___yfi 1079 ATGCAGGTTAA 1089
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.