Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06114 and BL00247
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence dna-align/BSNT_06114___htpG.1.5803.seq
# -bsequence dna-align/BL00247___htpG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06114___htpG-BL00247___htpG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06114___htpG-BL00247___htpG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06114___htpG
# 2: BL00247___htpG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1888
# Identity: 1467/1888 (77.7%)
# Similarity: 1467/1888 (77.7%)
# Gaps: 14/1888 ( 0.7%)
# Score: 5595.5
#
#
#=======================================
BSNT_06114___ 1 GTGGCGAAAAAAGAGTTTAAAGCAGAGTCTAAACGCTTGCTGGATATGAT 50
.||||.||.|.|||.||.||||||||.||.||.||.||||||||.||.||
BL00247___htp 1 ATGGCTAAGAGAGAATTCAAAGCAGAATCCAAGCGATTGCTGGACATCAT 50
BSNT_06114___ 51 GATTAACTCCATTTATACCCAAAAAGAAATTTTCCTGCGCGAGTTAATCT 100
|||.|||||.||||||.|||||||.|||.|.||..|..|.|||.|.||.|
BL00247___htp 51 GATCAACTCGATTTATTCCCAAAAGGAAGTCTTTTTAAGGGAGCTGATAT 100
BSNT_06114___ 101 CCAATTCGAGTGATGCGATTGACAAAATCTATTACAAAGCGCTTACGGAC 150
|||||.||||.|||||.||.||.||||||||.|||||||||||.||.||.
BL00247___htp 101 CCAATGCGAGCGATGCCATCGATAAAATCTACTACAAAGCGCTGACAGAT 150
BSNT_06114___ 151 GATGCGCTTACGTTTGATAAAGACAGTTACTACATAAAGGTCGCAGCTGA 200
|||.|.||.||.|||.|.||||||..||||||||||||..||.|.||.||
BL00247___htp 151 GATTCACTGACATTTAACAAAGACGATTACTACATAAAAATCTCCGCAGA 200
BSNT_06114___ 201 CAAAGATGCGAGAACATTAACCATCTCTGATACGGGGATCGGAATGACAA 250
.|||||....|||||..|.|||||..|.||.||.||.|||||.|||||.|
BL00247___htp 201 TAAAGAAAACAGAACGCTGACCATTGCGGACACCGGAATCGGCATGACGA 250
BSNT_06114___ 251 AGGATGAGCTTGAACAGCATCTTGGAACAATTGCAAAAAGCGGTTCCCTC 300
|.||.|||||||||.|||||||||||||.|||||.||.|||||.||.||.
BL00247___htp 251 AAGAAGAGCTTGAAGAGCATCTTGGAACGATTGCCAAGAGCGGCTCGCTT 300
BSNT_06114___ 301 GCGTTTAAAAAGGAAAACGAGCTGAAAGACGGACATGACATTATCGGGCA 350
|||||||||.|.||||||||..|.||||||||.||.||.||||||||.||
BL00247___htp 301 GCGTTTAAACAAGAAAACGAATTAAAAGACGGGCACGATATTATCGGCCA 350
BSNT_06114___ 351 GTTCGGTGTCGGTTTTTACGCGGCATTTATGGTTGCCGATGTCGTGACAG 400
||||||.||||||||.|||||.||.|||||||||||.||...|||.||.|
BL00247___htp 351 GTTCGGCGTCGGTTTCTACGCCGCTTTTATGGTTGCGGACACCGTCACCG 400
BSNT_06114___ 401 TCATCAGTAAAGCGCTTGGCAGCGAAGAGGCTTATAAATGGGAGTCTGCG 450
||||.|..|||||.|.|||||||||.||.||..||.|||||||.||.||.
BL00247___htp 401 TCATTACAAAAGCCCATGGCAGCGATGAAGCGCATCAATGGGAATCAGCC 450
BSNT_06114___ 451 GGTGCAGACGGCTATACAATTGAGCCG--TGTGAAAAGGATTCTGTCGGT 498
||.||.||||||||||||||.||.||| ||.|||| ||.||.|.|||.
BL00247___htp 451 GGAGCCGACGGCTATACAATCGAACCGGCTGCGAAA--GAATCAGCCGGA 498
BSNT_06114___ 499 ACAGACATTATCCTGAAAATCAAAGAGAACACAGAAGATGACAGCTATGA 548
||.||..|.||.|||||..|.||||||||.|||||.|||||.|.||||||
BL00247___htp 499 ACCGATGTCATTCTGAAGCTGAAAGAGAATACAGACGATGAAAACTATGA 548
BSNT_06114___ 549 CGAATTCTTAGAAGAATATCGTTTAAAAGCGATCATCAAGAAGTACTCCG 598
.||||.|.|.||.|...||||.|||||||||||||||||.|..|||||.|
BL00247___htp 549 TGAATACCTGGATGTTCATCGCTTAAAAGCGATCATCAAAACATACTCTG 598
BSNT_06114___ 599 ACTTCATTCGCTACCCGATCAAAATGGAT-ACGACCATTAATAAGCCGAA 647
|.|||||.||||||||||||||.|||||| .|| |..|.||.||||||||
BL00247___htp 599 ATTTCATCCGCTACCCGATCAAGATGGATGTCG-CGGTCAACAAGCCGAA 647
BSNT_06114___ 648 GGAAGGCAGCGAAAATGAATTCGAAGAGGTGCAGGAAGAGCAGACGGTCA 697
.||||||..||||||||||||.|||||.||.||||||||.||||||||||
BL00247___htp 648 AGAAGGCGCCGAAAATGAATTTGAAGAAGTCCAGGAAGAACAGACGGTCA 697
BSNT_06114___ 698 ACAGCATGGTGCCGATCTGGAGAAAAAACAAAAGCGAGCTGACAGATGAG 747
||||||||||||||||.||||||||||||||||||||.||||.||||||.
BL00247___htp 698 ACAGCATGGTGCCGATTTGGAGAAAAAACAAAAGCGAACTGAAAGATGAA 747
BSNT_06114___ 748 GATTATGAAAAATTCTATGCTGAAAAGCATTACGGGTTTGATAAACCGCT 797
||||||||....||.|||...||||||||||||||.|||||.||.||.||
BL00247___htp 748 GATTATGAGGCGTTTTATAAGGAAAAGCATTACGGTTTTGACAAGCCTCT 797
BSNT_06114___ 798 GACACACGTTCATATCAGTGTGGATGGAGCGGTTCGCTACAACGCGATTC 847
..|.|||.|.||||..||.||.||.||.|||||..|.|||.|.||||||.
BL00247___htp 798 CGCGCACATCCATACAAGCGTAGACGGCGCGGTGAGATACCATGCGATTT 847
BSNT_06114___ 848 TATTCATCCCTGAAAACATGCCGTTTGACTACTATTCCAAGGAATATGAG 897
|||||||.||||||||.||.|||||..|||||||..|.|||||||..|||
BL00247___htp 848 TATTCATTCCTGAAAATATTCCGTTCAACTACTACACGAAGGAATTCGAG 897
BSNT_06114___ 898 AAAGGCTTGGAGCTGTATTCCAATGGCGTGCTGATCATGAATAAGTGCGC 947
||.||..||||.||||||||.||.||.||||||||||||.|.|||||..|
BL00247___htp 898 AAGGGTCTGGAACTGTATTCGAACGGTGTGCTGATCATGGAAAAGTGTCC 947
BSNT_06114___ 948 AGACCTGCTACCGGACCACTTCAGCTTTGTGAAGGGCATGGTCGATTCCG 997
.||.|||||.||.|||||.|||||||||||.||.||.|||||.|||||.|
BL00247___htp 948 GGATCTGCTGCCTGACCATTTCAGCTTTGTCAAAGGAATGGTTGATTCAG 997
BSNT_06114___ 998 AGGATCTGTCGCTGAATATTTCCAGAGAAATGCTGCAGCATGACCGCCAG 1047
|.|||.|.|||||.||.|||||.||.||.|||||.|||||||||.|.|||
BL00247___htp 998 AAGATTTATCGCTCAACATTTCGAGGGAGATGCTCCAGCATGACAGGCAG 1047
BSNT_06114___ 1048 CTGAAGCTGATCGCGAAAAACATCAGCAAGAAAATCAAAAGCGAGCTGCA 1097
|||||||||||.||.||||||||||||||.||||||||.|..||||||.|
BL00247___htp 1048 CTGAAGCTGATTGCCAAAAACATCAGCAAAAAAATCAAGAATGAGCTGAA 1097
BSNT_06114___ 1098 AAGCCTGTTGAAAAAAGACCGCGAGAAATACGAGACGTTCTA-CAAGTCG 1146
.|||.||.|||||||.|||.|.||.|||||||||.|.||.|| ||| |||
BL00247___htp 1098 GAGCTTGCTGAAAAATGACAGAGAAAAATACGAGTCTTTTTATCAA-TCG 1146
BSNT_06114___ 1147 TTTGGCAGACAGCTGAAATTCGGCGTGTATAATGATTTTGGCGCGAATAA 1196
||||||||||||||.||||||||.||.||.|||||||||||.||..||||
BL00247___htp 1147 TTTGGCAGACAGCTTAAATTCGGGGTATACAATGATTTTGGAGCCCATAA 1196
BSNT_06114___ 1197 GGATCAATTGAAGGATCTCCTATTATTCTACTCTTCAAAAGAGAAAAAAC 1246
.||||..|||||.||.||.||..|.|||||.||.||||||||||||||.|
BL00247___htp 1197 AGATCTGTTGAAAGACCTGCTGCTTTTCTATTCATCAAAAGAGAAAAAGC 1246
BSNT_06114___ 1247 TGGTCAGCTTAGACGAGTATGTTTCCAGAATGCCAGAGGAGCAAAAATAC 1296
||||||.|.|.||.||.|||||.|||||||||||.||.||.|||||||||
BL00247___htp 1247 TGGTCACCCTTGAGGAATATGTGTCCAGAATGCCTGAAGATCAAAAATAC 1296
BSNT_06114___ 1297 ATTTATTACGCGACCGGTGATTCTTACGACCGCATTGAGAAACTGCCGCA 1346
||||||||.||..|.||.||.||.||.|||||.||.||.||.||.||.||
BL00247___htp 1297 ATTTATTATGCATCAGGCGACTCGTATGACCGAATAGAAAAGCTTCCTCA 1346
BSNT_06114___ 1347 AACGGAAATGGTGGCGGACAAAGGCTATGAAATCCTCTACTTTACTGAGG 1396
|||.||..||||..||||.|||||.|||||||||||.||.||.||.||||
BL00247___htp 1347 AACCGAGCTGGTTTCGGAAAAAGGGTATGAAATCCTTTATTTCACCGAGG 1396
BSNT_06114___ 1397 ACATCGATGAGTTTGCAATTAAAATGCTGGCTTCTTATCAGGAAAAAGAA 1446
|.|||||||||||.||.||.|||||||||||...||||||.||.||||||
BL00247___htp 1397 ATATCGATGAGTTCGCCATCAAAATGCTGGCGAATTATCAAGAGAAAGAA 1446
BSNT_06114___ 1447 TTCAAGTCCGTATCAAGCGGAGACCTTGGCATAGACACGGATGAGGATCA 1496
||||||||.|||||||||||.|||||.||.||.||.|..|||||.||.||
BL00247___htp 1447 TTCAAGTCGGTATCAAGCGGCGACCTCGGAATCGAAAACGATGACGAGCA 1496
BSNT_06114___ 1497 AAAGCAGTCCGAGGAAGAGGAAAACAAGTATAAGGATCTGTTTAAGGAAA 1546
|||.||.||.||.|..||.||.|.|.|.||.||.||.||||||.|.||.|
BL00247___htp 1497 AAACCAATCTGACGGGGATGACAGCCAATACAAAGACCTGTTTGAAGAGA 1546
BSNT_06114___ 1547 TGAATAACATTCTGTCAGACAAAGTGAAAAACGTCAGAATCTCAAAACGG 1596
||||.||.|.||||...|..||||||||||.|||.||....|||||||||
BL00247___htp 1547 TGAAAAAGACTCTGGATGGAAAAGTGAAAAGCGTGAGGGCGTCAAAACGG 1596
BSNT_06114___ 1597 CTTA--AATCACATCCAGTCTGCCTTGCTGCTGACGGCGAAGTGACAATT 1644
||.| |.|||| ||| ||.||||||||.||||||||.|||||.||.||.
BL00247___htp 1597 CTGAAGACTCAC-TCC-GTATGCCTTGCCGCTGACGGAGAAGTCACCATC 1644
BSNT_06114___ 1645 GAGATGGAAAAAATCTTAAACGCAATGCCTGACAGCCAAAATGTGAAGGC 1694
||||||||.|||||||||||||||||||||||||..||..||||.|||||
BL00247___htp 1645 GAGATGGAGAAAATCTTAAACGCAATGCCTGACAATCAGCATGTAAAGGC 1694
BSNT_06114___ 1695 GGAAAAAGTGCTGGAAATCAACCCGAATCACGAGGTATTCCAAACGCTGC 1744
.||.|||||..||||||||||..|.||.|||||.||.|||.||||..|||
BL00247___htp 1695 TGATAAAGTATTGGAAATCAATACAAACCACGAAGTCTTCAAAACATTGC 1744
BSNT_06114___ 1745 AGGACGCGTTTGAACAA-GATAAAGAGAAGCTGAGCCTGTACACAAACCT 1793
||.|.||.|||| |||| ||.||.||.||..|.|..||||||||...|||
BL00247___htp 1745 AGAATGCTTTTG-ACAACGACAAGGATAAATTCAAACTGTACACCGGCCT 1793
BSNT_06114___ 1794 TCTGTACAATCAGGCGCTTCTCATTGAAGGCCTGCCGATTCAGGACCCTG 1843
.||||||||.||||||||.||.||.||||||.||||.|||.|.|||||.|
BL00247___htp 1794 CCTGTACAACCAGGCGCTGCTGATAGAAGGCTTGCCAATTGAAGACCCCG 1843
BSNT_06114___ 1844 TTGAATTTACGAACAATATTTGCAAGGTCATGGTGTAA 1881
|.||||||||||||.||||.|||||.||.||||..|||
BL00247___htp 1844 TCGAATTTACGAACGATATATGCAAAGTAATGGCATAA 1881
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