Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06100 and BL00246
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence dna-align/BSNT_06100___mmsA.1.5803.seq
# -bsequence dna-align/BL00246___iolA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06100___mmsA-BL00246___iolA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06100___mmsA-BL00246___iolA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06100___mmsA
# 2: BL00246___iolA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1467
# Identity: 1224/1467 (83.4%)
# Similarity: 1224/1467 (83.4%)
# Gaps: 6/1467 ( 0.4%)
# Score: 5150.0
#
#
#=======================================
BSNT_06100___ 1 ATGGCAGAAATCAGAAAATTAAAAAACTACATCAACGGTGAATGGGTTGA 50
|||||||||||||||||.||||.||||||.||.||.||.|||||||||||
BL00246___iol 1 ATGGCAGAAATCAGAAAGTTAAGAAACTATATTAATGGAGAATGGGTTGA 50
BSNT_06100___ 51 AAGCAAAACAGATCAATATGAAGATGTCGTCAATCCGGCGACGAAAGAAG 100
|||||||||.||..|||||||||||||.||||||||.|||||||||||||
BL00246___iol 51 AAGCAAAACCGACAAATATGAAGATGTAGTCAATCCAGCGACGAAAGAAG 100
BSNT_06100___ 101 TACTATGCCAAGTGCCGATTTCTACAAAAGAGGATATTGATTACGCAGCG 150
|.||.|||||||||||||||||.||...|||||||||.||.|||||||||
BL00246___iol 101 TGCTGTGCCAAGTGCCGATTTCGACGCGAGAGGATATAGAATACGCAGCG 150
BSNT_06100___ 151 CAAACGGCGGCTGAAGCGTTTGAAACATGGTCAAAGGTGGCGGTTCCGCG 200
|||||.|||||||||||||||.|||||||||||||.|||||.||||||||
BL00246___iol 151 CAAACAGCGGCTGAAGCGTTTAAAACATGGTCAAAAGTGGCTGTTCCGCG 200
BSNT_06100___ 201 CCGTGCCAGAATTCTATTTAACTTTCAGCAGCTGCTGTCCCAGCATAAAG 250
|||.||.||||||||||||||||||||||||||..|..|.||||||||||
BL00246___iol 201 CCGGGCAAGAATTCTATTTAACTTTCAGCAGCTTTTAACTCAGCATAAAG 250
BSNT_06100___ 251 AAGAACTGGCTCATCTGATTACCATTGAAAACGGAAAAAACACAAAAGAA 300
|.||.||.||.||.||.||.||.||||||||||||||||||||.||||||
BL00246___iol 251 AGGAGCTTGCCCACCTCATCACGATTGAAAACGGAAAAAACACGAAAGAA 300
BSNT_06100___ 301 GCTTTAGGTGAAGTGGGACGCGGGATTGAAAACGTAGAGTTCGCCGCTGG 350
||.||.||||||||.||||||||.||.||.||.||.|||||.||.|||||
BL00246___iol 301 GCGTTGGGTGAAGTTGGACGCGGCATCGAGAATGTCGAGTTTGCAGCTGG 350
BSNT_06100___ 351 AGCACCTTCCCTGATGATGGGTGACTCACTTGCTTCCATCGCAACGGACG 400
|||.|||||.|||||||||||.||.|||||||||.|.||.|||||.||.|
BL00246___iol 351 AGCGCCTTCACTGATGATGGGAGATTCACTTGCTACAATTGCAACCGATG 400
BSNT_06100___ 401 TTGAAGCGGCGAACTACCGTTACCCAATCGGAGTTGTCGGCGGAATCGCG 450
|||||||||||||||||||.|||||.||||||||.|||||||||||.||.
BL00246___iol 401 TTGAAGCGGCGAACTACCGGTACCCGATCGGAGTCGTCGGCGGAATTGCA 450
BSNT_06100___ 451 CCATTCAACTTCCCGATGATGGTTCCTTGCTGGATGTTCCCGATGGCGAT 500
|||||.|||||||||||||||||.||.||||||||||||||.|||||.||
BL00246___iol 451 CCATTTAACTTCCCGATGATGGTACCATGCTGGATGTTCCCAATGGCCAT 500
BSNT_06100___ 501 CGCGCTCGGCAACACATTTATTTTAAAGCCATCTGAGCGGACTCCGCTGT 550
.|||.|.||.||||||||||||.|.|||||.||.||.|||||.|||||.|
BL00246___iol 501 TGCGTTAGGAAACACATTTATTCTGAAGCCTTCCGAACGGACGCCGCTTT 550
BSNT_06100___ 551 TAACAGAGAAATTGGTTGAGCTTTTTGAAAAAGCGGGCCTTCCGAAAGGG 600
|.||.||.||..|.|||||.||.|||||||||||.||.|||||.||||||
BL00246___iol 551 TGACGGAAAAGCTAGTTGAACTGTTTGAAAAAGCCGGACTTCCAAAAGGG 600
BSNT_06100___ 601 GTATTCAACGTCGTATACGGTGCGCATGACGTTGTGAACGGCATCCTCGA 650
||.|||||.||.||||||||.||.|||||.||.||.||||||||.|||||
BL00246___iol 601 GTCTTCAATGTGGTATACGGCGCACATGATGTAGTAAACGGCATTCTCGA 650
BSNT_06100___ 651 GCATCCCGAAATTAAAGCGATTTCATTTGTAGGCTCCAAGCCAGTCGGCG 700
.||.||.||||||||||||||||||||.||.||.||.||.||.|||||.|
BL00246___iol 651 ACACCCGGAAATTAAAGCGATTTCATTCGTCGGTTCAAAACCGGTCGGAG 700
BSNT_06100___ 701 AATACGTCTACAAAAAAGGAAGCGAACACTTAAAACGCGTTCAATCTCTG 750
||||.|||||.|||||||||||||||.|..|.||||||||||||||.|||
BL00246___iol 701 AATATGTCTATAAAAAAGGAAGCGAAAATCTGAAACGCGTTCAATCGCTG 750
BSNT_06100___ 751 ACTGGTGCGAAAAACCATACGATTGTCTTGAACGATGCGAATCTTGAAGA 800
||.||.||.||||||||.||.||.||..||||||||||.||.||||||||
BL00246___iol 751 ACAGGCGCTAAAAACCACACCATCGTTCTGAACGATGCCAACCTTGAAGA 800
BSNT_06100___ 801 CACGGTCACAAACATCGTCGGAGCTGCCTTCGGTTCTGCCGGTGAACGCT 850
.|||||.|||||.||..||||.|||||.|||||.||||||||.|||||||
BL00246___iol 801 TACGGTAACAAATATTATCGGCGCTGCTTTCGGATCTGCCGGCGAACGCT 850
BSNT_06100___ 851 GCATGGCTTGTGCGGTTGTGACAGTTGAAGAAGGAATCGCCGATGAATTT 900
|||||||.||.||.||.||.||.||||||||||||||.||.|||||.||.
BL00246___iol 851 GCATGGCATGCGCAGTAGTAACGGTTGAAGAAGGAATTGCAGATGAGTTC 900
BSNT_06100___ 901 ATGGCGAA---GCTGCAGGAAAAAGTGGCGGACATTAAAATCGGTAACGG 947
||||..|| |.|.||| ||||...|.||..|.||||||||.|||||
BL00246___iol 901 ATGGAAAAATTGGTTCAG---AAAGCATCTGAAGTCAAAATCGGAAACGG 947
BSNT_06100___ 948 CCTTGATGACGGCGTGTTCTTAGGACCGGTGATTCGCGAAGACAACAAGA 997
.|||||.|||||.||.|||.|.||.||.||.|||||||||||||||||||
BL00246___iol 948 ACTTGACGACGGTGTATTCCTCGGGCCTGTCATTCGCGAAGACAACAAGA 997
BSNT_06100___ 998 AGCGCACGCTCAGCTATATCGAAAAAGGCCTTGAAGAAGGTGCCAGACTC 1047
|.|||||.|||.|||||||..|||||||..|||||||.|||||.|||||.
BL00246___iol 998 AACGCACACTCGGCTATATACAAAAAGGAATTGAAGAGGGTGCGAGACTT 1047
BSNT_06100___ 1048 GTATGTGACGGACGTGAAAATGTGTCTGACGACGGCTACTTTGTCGGCCC 1097
||.||.||||||||.||||||||..|.||.||.|||||.||.||||||||
BL00246___iol 1048 GTCTGCGACGGACGCGAAAATGTTACAGATGAAGGCTATTTCGTCGGCCC 1097
BSNT_06100___ 1098 GACGATCTTTGACAATGTCACAACAGAGATGACGATCTGGAAAGATGAAA 1147
|||.||||||||||||||||||||.||.||||||||||||||.||.||||
BL00246___iol 1098 GACAATCTTTGACAATGTCACAACTGATATGACGATCTGGAAGGACGAAA 1147
BSNT_06100___ 1148 TTTTCGCTCCGGTCTTATCTGTCATCCGTGTGAAAAACCTGAAAGAAGCG 1197
||||.|||||.||..||||.||||||||||||||.|||.|||||||||||
BL00246___iol 1148 TTTTTGCTCCTGTACTATCGGTCATCCGTGTGAAGAACTTGAAAGAAGCG 1197
BSNT_06100___ 1198 ATTGAAATCGCCAATAAGTCTGAGTTTGCGAACGGTGCCTGCTTGTTCAC 1247
.||||.||||||||..||||.||.|||||.|||||.||.|||||||||||
BL00246___iol 1198 GTTGAGATCGCCAACCAGTCCGAATTTGCAAACGGCGCATGCTTGTTCAC 1247
BSNT_06100___ 1248 ATCCAATTCAAACGCAATCCGCTACTTCCGTGAAAACATTGATGCGGGAA 1297
|||.|||||.||.||.||||||||.|||||||||||||||||||||||||
BL00246___iol 1248 ATCGAATTCGAATGCGATCCGCTATTTCCGTGAAAACATTGATGCGGGAA 1297
BSNT_06100___ 1298 TGCTAGGCATCAACCTTGGTGTGCCGGCTCCAATGGCGTTCTTCCCATTC 1347
||||.|||||||||||.|||||.||||||||.|||||.||||||||.|||
BL00246___iol 1298 TGCTCGGCATCAACCTGGGTGTACCGGCTCCGATGGCATTCTTCCCGTTC 1347
BSNT_06100___ 1348 TCAGGTTGGAAATCTTCATTCTTTGGAACGCTGCATGCGAACGGAAAAGA 1397
||.||.|||||.|||||.||||||||.||..|||||||.|||||||||||
BL00246___iol 1348 TCCGGATGGAAGTCTTCGTTCTTTGGTACATTGCATGCCAACGGAAAAGA 1397
BSNT_06100___ 1398 CAGCGTCGACTTCTATACACGTAAAAAAGTGGTAACGGCAAGATTTCCGG 1447
|||||||||.||||||||.||.|||||.||.||.||.|||||||.|||||
BL00246___iol 1398 CAGCGTCGATTTCTATACGCGCAAAAAGGTCGTCACTGCAAGATATCCGG 1447
BSNT_06100___ 1448 CACCTGATTTCAACTAA 1464
|.|||||.|||||.|||
BL00246___iol 1448 CGCCTGACTTCAATTAA 1464
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.