Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06099 and BL00245

See Amino acid alignment / Visit BSNT_06099 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:06
# Commandline: needle
#    -asequence dna-align/BSNT_06099___iolB.1.5803.seq
#    -bsequence dna-align/BL00245___iolB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06099___iolB-BL00245___iolB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06099___iolB-BL00245___iolB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06099___iolB
# 2: BL00245___iolB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 823
# Identity:     664/823 (80.7%)
# Similarity:   664/823 (80.7%)
# Gaps:          14/823 ( 1.7%)
# Score: 2676.0
# 
#
#=======================================

BSNT_06099___      1 ATGAGTTATTTGTTGCGTAAGCCGCAGTCGCATGAAGTGTCTAATGGGGT     50
                     ||||||.||||||||||.|||||||||.||.||||..||||..|.||.||
BL00245___iol      1 ATGAGTCATTTGTTGCGCAAGCCGCAGGCGAATGAGCTGTCACAAGGCGT     50

BSNT_06099___     51 CAAACTCGTGCACGAAGTAACGACATCCAACTCTGATCTCACTTATGTAG    100
                     .||.||.||.||||||||.|..|.|||.||.||.|||||.|.||||||.|
BL00245___iol     51 GAAGCTTGTACACGAAGTGAAAAAATCGAATTCCGATCTAAGTTATGTCG    100

BSNT_06099___    101 AGTTTAAAGTGTTAGATCTTGCATCAGGTTCAAGCTATACAGAAGAAT--    148
                     ||||||||||..|.|||||||||.|.||.||.||||||   |||||||  
BL00245___iol    101 AGTTTAAAGTCCTTGATCTTGCACCGGGATCCAGCTAT---GAAGAATCG    147

BSNT_06099___    149 -TGAAAAAACAAGAAATCTGTATTGTGGCGGTAACGGGAAAAATTACAGT    197
                      |||..|||||||||..|||.||.||.|||.|.||.|||||.|||||.|.
BL00245___iol    148 CTGAGCAAACAAGAATGCTGCATCGTCGCGCTTACCGGAAAGATTACCGC    197

BSNT_06099___    198 GACAGATCATGAGTCGACTTTTGAGAATATCGGCACGCGTGAAAGCGTAT    247
                     .||.||||||||...|||.|||||.||||||||||||.|.||||||||.|
BL00245___iol    198 AACCGATCATGAACAGACATTTGAAAATATCGGCACGAGAGAAAGCGTTT    247

BSNT_06099___    248 TTGAACGAAAACCGACAGACAGCGTCTATATATCAAATGACCGTGCA--T    295
                     |.|||.||||.|||||.||||||||.|||.|.||||||||||  |||  |
BL00245___iol    248 TCGAAAGAAAGCCGACCGACAGCGTATATGTGTCAAATGACC--GCAAGT    295

BSNT_06099___    296 TTGAGATCACAGCAGTCAGCGACGCAAGAGTGGCGCTTTGCTATTCTCCA    345
                     |.|..||.||.||.||.|..||.||||||||.||.||.||||||||.||.
BL00245___iol    296 TCGGCATTACCGCCGTTACAGAGGCAAGAGTTGCCCTGTGCTATTCACCT    345

BSNT_06099___    346 TCGGAAAAGCAGCTTCCGACAAAGCTGATCAAAGCGGAAGACAACGGAAT    395
                     ||.|||||.|||||||||||.||.|||||||||||.|||||||||||.||
BL00245___iol    346 TCTGAAAACCAGCTTCCGACGAAACTGATCAAAGCTGAAGACAACGGTAT    395

BSNT_06099___    396 TGAGCATCGCGGGCAATTTTCA--AACAAACGTACTGTTCATAACATTCT    443
                     ||||.|  .||||.||..||||  ||.|||||.||.||.||||||||.||
BL00245___iol    396 TGAGAA--CCGGGGAAAATTCAGCAATAAACGAACCGTCCATAACATACT    443

BSNT_06099___    444 TCCGGATTCAGACCCTTCAGCTAACAGTCTATTAGTAGTTGAAGTCTATA    493
                     ||||||||||||.||||||||.||||||||.|||||.||.||||||||.|
BL00245___iol    444 TCCGGATTCAGATCCTTCAGCGAACAGTCTTTTAGTCGTCGAAGTCTACA    493

BSNT_06099___    494 CAGACAGCGGCAACTGGTCCAGCTACCCGCCTCACAAACATGATCAAGAC    543
                     |.||.|||||.||||||||||||||.|||||.|||||.|||||.||||||
BL00245___iol    494 CTGAAAGCGGAAACTGGTCCAGCTATCCGCCGCACAAGCATGACCAAGAC    543

BSNT_06099___    544 AACTTGCCGGAAGAATCTTTCTTAGAAGAAACGTACTACCATGAGTTAGA    593
                     |||.||||.|||||.||.||.|||||||||||.|||||||||||..|.||
BL00245___iol    544 AACCTGCCTGAAGAGTCCTTTTTAGAAGAAACATACTACCATGAACTTGA    593

BSNT_06099___    594 CCCGGGACAGGGCTTTGTATTTCAGCGCGTATACACAGATGACCGTTCTA    643
                     .|||...||.|||||.||||||||||||||||||||.|||||||||||.|
BL00245___iol    594 TCCGCAGCAAGGCTTCGTATTTCAGCGCGTATACACGGATGACCGTTCCA    643

BSNT_06099___    644 TTGACGAGACAATGACTGTGGAAAATGAAAACGTTGTCATCGTTCCTGCG    693
                     |.||||||||.||||||||.|||||||.|||||||||||||||.||.||.
BL00245___iol    644 TCGACGAGACGATGACTGTTGAAAATGGAAACGTTGTCATCGTGCCGGCC    693

BSNT_06099___    694 GGATACCACCCGGTAGGCGTTCCGGACGGATACACATCCTACTATTTAAA    743
                     ||||||||.||.||.||.||.||.|||||||||||||||||.||||||||
BL00245___iol    694 GGATACCATCCTGTCGGGGTGCCTGACGGATACACATCCTATTATTTAAA    743

BSNT_06099___    744 TGTCATGGCAGGGCCGACGCGAAAATGGAAGTTTTATAACGACCCGGCGC    793
                     .||.|||||||||||||||||.||||||||||||.||||||||||.|..|
BL00245___iol    744 CGTGATGGCAGGGCCGACGCGTAAATGGAAGTTTCATAACGACCCTGACC    793

BSNT_06099___    794 ATGAGTGGATTTTAGAACGCTAA    816
                     ||||.||||||||.|||||||||
BL00245___iol    794 ATGAATGGATTTTGGAACGCTAA    816


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