Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06098 and BL00244
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:06
# Commandline: needle
# -asequence dna-align/BSNT_06098___iolC.1.5803.seq
# -bsequence dna-align/BL00244___iolC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06098___iolC-BL00244___iolC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06098___iolC-BL00244___iolC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06098___iolC
# 2: BL00244___iolC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 982
# Identity: 767/982 (78.1%)
# Similarity: 767/982 (78.1%)
# Gaps: 8/982 ( 0.8%)
# Score: 2946.0
#
#
#=======================================
BSNT_06098___ 1 ATGAAGTATACATTCAATGAAGAGAAGGCTTTTGACATTATTGCCATCGG 50
|||||||||||.||.|||||||||||.|..|||||||||.|.||.|||||
BL00244___iol 1 ATGAAGTATACGTTTAATGAAGAGAAAGAATTTGACATTGTAGCGATCGG 50
BSNT_06098___ 51 CCGGGCATGTATTGACCTGAACGCAGTCGAATACAACCGCCCAATGGAAG 100
|||.|||||.||.||..|.||||||||||||||||||.|.||.|||||..
BL00244___iol 51 CCGCGCATGCATCGATTTAAACGCAGTCGAATACAACAGGCCGATGGAGC 100
BSNT_06098___ 101 AGACGATGACATTTTCCAAATACGTCGGCGGTTCACCTGCGAATATCGCG 150
||||||||||||||||.|||||.||||||||.||.||.||.|||||.||.
BL00244___iol 101 AGACGATGACATTTTCAAAATATGTCGGCGGCTCCCCGGCTAATATTGCA 150
BSNT_06098___ 151 ATCGGCAGCGCGAAGCTTGGCTTAAAAGCGGGCTTCATCGGCAAAATTCC 200
||||||||..|.||..|.|||||.||..|.||.||.|||||.||.|||||
BL00244___iol 151 ATCGGCAGTTCCAAATTAGGCTTGAAGACCGGATTTATCGGGAAGATTCC 200
BSNT_06098___ 201 GGATGACCAGCATGGAAGATTCATAGAGTCCTATATGAGAAAGACCGGCG 250
||||||||||||.||.||||||||.||..|||||||||||||.||.||.|
BL00244___iol 201 GGATGACCAGCACGGCAGATTCATCGAAACCTATATGAGAAATACAGGTG 250
BSNT_06098___ 251 TTGATACAACACAGATGGTTGTTGATCAAGATGGACACAAAGCAGGCCTT 300
|.|||||..||||.||||..||||||.||||.|||||.|||||.||.|||
BL00244___iol 251 TCGATACGTCACAAATGGCGGTTGATAAAGACGGACATAAAGCTGGGCTT 300
BSNT_06098___ 301 GCATTTACAGAAATCCTCAGCCCTGAAGAATGCAGCATTTTAATGTATCG 350
||.||.||||||||..|.|||||||||||||||||||||||||||||..|
BL00244___iol 301 GCTTTCACAGAAATTTTAAGCCCTGAAGAATGCAGCATTTTAATGTACAG 350
BSNT_06098___ 351 CGATGATGTGGCGGATCTTTATCTTGAGCCTTCAGAGGTAAGCGAGGACT 400
.||||||||.||.||||||||.||||..|||||.||.||.|.|||.||||
BL00244___iol 351 GGATGATGTTGCAGATCTTTACCTTGCCCCTTCTGAAGTGAACGAAGACT 400
BSNT_06098___ 401 ATATCG-CAAATGCGAAAATGCTGCTTGTTTCCGGGACAGCGCTCGCCAA 449
||||.| ||||| ||||.|||||.|||||.||.||.||.|||||.||.||
BL00244___iol 401 ATATTGCCAAAT-CGAAGATGCTTCTTGTGTCAGGTACGGCGCTGGCTAA 449
BSNT_06098___ 450 AAGCCCGTCACGGGAAGCGGTGCTAAAAGCTGTTCAATACGCGAAGAAGC 499
||||||.||.||.|||||||||||.|||||.||.||....|||||.||||
BL00244___iol 450 AAGCCCTTCCCGCGAAGCGGTGCTGAAAGCCGTACAGCTGGCGAAAAAGC 499
BSNT_06098___ 500 ATCAGGTTAAAGTGGTGTTCGAACTGGATTACCGTCCGTATACGTGG-CA 548
||||.||.||||||||.||.||.||.||.||.|||||.||||||||| ||
BL00244___iol 500 ATCAAGTGAAAGTGGTCTTTGAGCTTGACTATCGTCCATATACGTGGACA 549
BSNT_06098___ 549 GTCATCAGATGAAACAGCCGTTTATTATTCTTTGGTTGCCGAGCAGTCTG 598
||..|.||.|||||.|||||.||.|||.|..|.||||||||.||.||.|
BL00244___iol 550 -TCTGCGGAGGAAACGGCCGTCTACTATACGCTTGTTGCCGAACAATCAG 598
BSNT_06098___ 599 ATATCGTCATCGGCACACGCGATGAATTTGATGTGATGGAAAACCGCACA 648
|.||.||||||||.||.||.|||||.||||||||.||||||||....|..
BL00244___iol 599 ACATTGTCATCGGGACGCGTGATGAGTTTGATGTAATGGAAAATAAGAGC 648
BSNT_06098___ 649 GGCGGAAGCAATGAAGAATCCGTCAATCATTTATTTGGCCATTCAGCCGA 698
|||||.||||||||||||||.||..|.||||||||||..|||||.||.||
BL00244___iol 649 GGCGGCAGCAATGAAGAATCTGTTCAGCATTTATTTGCACATTCCGCAGA 698
BSNT_06098___ 699 CCTCGTTGTCATCAAACACGGCGTCGAAGGCTCTTACGCATACAGCAAAT 748
.||.||.||.|||||.|||||.||||||||.||.||.|||||||||||||
BL00244___iol 699 TCTTGTCGTTATCAAGCACGGTGTCGAAGGTTCATATGCATACAGCAAAT 748
BSNT_06098___ 749 CCGGCGAGGTATTCCGCGCTCAAGCGTACAAGACAAAAGTGCTGAAAACC 798
||||.||.||.|||||.||..||||||||||.||.||.||..|||||||.
BL00244___iol 749 CCGGGGACGTCTTCCGGGCGAAAGCGTACAAAACGAAGGTCTTGAAAACG 798
BSNT_06098___ 799 TTTGGAGCCGGTGACTCCTATGCGTCAGCCTTTATCTATGGCCT--TGTC 846
||||||||.||.||.||.||.||.||.|||||..||||.||.|| |.||
BL00244___iol 799 TTTGGAGCGGGCGATTCATACGCCTCCGCCTTCCTCTACGGACTCGTTTC 848
BSNT_06098___ 847 AGCGGAAAAGACATTGAAACGGCATTGAAATACGGCAGTGCTTCCGCTTC 896
| ||.|||||.||||||||.||..||||||||||.||.||||||||.||
BL00244___iol 849 A--GGCAAAGATATTGAAACCGCGCTGAAATACGGAAGCGCTTCCGCCTC 896
BSNT_06098___ 897 CATTGTGGTGAGTAAGCATAGTTCGTCAGAAGCGATGCCGACTGCGGAAG 946
.|||||.||....|||||.||.||.||.||||||||||||||.|..|..|
BL00244___iol 897 GATTGTTGTTTCAAAGCACAGCTCATCTGAAGCGATGCCGACAGTCGCCG 946
BSNT_06098___ 947 AAATCGTACAGCTTATTGAAGCACAGTCATAA 978
|.||.|.|.|||||||||..||.|||||.|||
BL00244___iol 947 AGATTGAAGAGCTTATTGCGGCTCAGTCTTAA 978
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