Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06097 and BL00243
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:06
# Commandline: needle
# -asequence dna-align/BSNT_06097___iolD.1.5803.seq
# -bsequence dna-align/BL00243___iolD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06097___iolD-BL00243___iolD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06097___iolD-BL00243___iolD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06097___iolD
# 2: BL00243___iolD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1920
# Identity: 1562/1920 (81.4%)
# Similarity: 1562/1920 (81.4%)
# Gaps: 12/1920 ( 0.6%)
# Score: 6363.0
#
#
#=======================================
BSNT_06097___ 1 GTGGGTAAGAAAATTCGCTTAACAACAGCACAGGCGCTGATTAAATTCTT 50
|||||.||||||||.||.|||||.||||||||.|||.|.|||||.|||||
BL00243___iol 1 GTGGGCAAGAAAATACGTTTAACCACAGCACAAGCGTTAATTAAGTTCTT 50
BSNT_06097___ 51 AAACCAGCAGTACATCCATGTTGATGGAAAGGAAGAGCCTTTTGTCGAAG 100
|||.|||||||||||||||||.||||||.|.|||...||.||||||||.|
BL00243___iol 51 AAATCAGCAGTACATCCATGTAGATGGAGAAGAAACTCCGTTTGTCGAGG 100
BSNT_06097___ 101 GGATTTTCACAATTTTCGGTCATGGAAACGTATTAGGGATCGGGCAAGCG 150
|.||.||.||.|||||.||.|||||.|||||..|.||.|||||.||.|||
BL00243___iol 101 GAATCTTTACGATTTTTGGCCATGGGAACGTCGTTGGAATCGGCCAGGCG 150
BSNT_06097___ 151 CTTGAGCAGGATGCAGGCCATTTGAAAGTCTATCAAGGGAAAAATGAACA 200
|||||.||||||||.|||||.||.||.||.|.||||||.||||||||.||
BL00243___iol 151 CTTGAACAGGATGCCGGCCACTTAAAGGTGTTTCAAGGCAAAAATGAGCA 200
BSNT_06097___ 201 AGGAATGGCGCATGCGGCCATGGCGTACAGCAAGCAAATGCTGAGAAGAA 250
.||||||||||||||.||.|||||.|||||||||||||||||||||||.|
BL00243___iol 201 GGGAATGGCGCATGCAGCAATGGCTTACAGCAAGCAAATGCTGAGAAGGA 250
BSNT_06097___ 251 AAATATATGCGGTGTCTACATCCGTCGGACCTGGAGCGGCTAACTTGGTG 300
|.||.|||||.|||||.|||||.||||||||.|||||.||||||.|.|||
BL00243___iol 251 AGATCTATGCCGTGTCGACATCAGTCGGACCGGGAGCAGCTAACCTTGTG 300
BSNT_06097___ 301 GCGGCAGCCGGCACTGCATTGGCAAACAATATCCCAGTTCTCTTGATTCC 350
||.||.||.||.|||||..|.||.|||||.||.|||||.|||||||||||
BL00243___iol 301 GCAGCCGCAGGTACTGCGCTTGCGAACAACATTCCAGTCCTCTTGATTCC 350
BSNT_06097___ 351 GGCAGACACATTTGCGACAAGACAGCCAGACCCTGTACTGCAGCAAATGG 400
.||.||.||||||||.||.||||||||.||.|||||.||.||||||.|.|
BL00243___iol 351 AGCCGATACATTTGCCACGAGACAGCCTGATCCTGTTCTTCAGCAAGTAG 400
BSNT_06097___ 401 AGCAAGAATACAGCGCGGCGATTACGACAAACGATGCATTGAAACCTGTA 450
||||.||||||||.||||||||||||||.||||||||||||||.|||||.
BL00243___iol 401 AGCAGGAATACAGTGCGGCGATTACGACGAACGATGCATTGAAGCCTGTT 450
BSNT_06097___ 451 TCGAGATACTGGGACCGCATTACGCGCCCTGAGCAGCTGATGAGCAGTTT 500
|||||.||.||||||||.||||||||||||||.|||.|||||||||||.|
BL00243___iol 451 TCGAGGTATTGGGACCGTATTACGCGCCCTGAACAGTTGATGAGCAGTCT 500
BSNT_06097___ 501 GCTGCGCGCGTTTGAAGTCATGACTGATCCGGCAAAAGCAGGTCCGGCAA 550
|.|.|||||.||||||||.|||||.||.||.||||||||.|||||.||||
BL00243___iol 501 GATTCGCGCTTTTGAAGTAATGACAGACCCTGCAAAAGCTGGTCCTGCAA 550
BSNT_06097___ 551 CGATTTGTATTTCTCAGGATGTTGAAGGGGAAGCATACGATTTTGATGAA 600
|||||||.||||||||.|||||||||||.||.||.||.|||||.||||||
BL00243___iol 551 CGATTTGCATTTCTCAAGATGTTGAAGGCGAGGCCTATGATTTCGATGAA 600
BSNT_06097___ 601 AGTTTCTTCGTCAAACGGGTTCACTATATTGATCGCATGCAGCCGAGCGA 650
||.||.||.|..|||||.|||||||||.|||||||||...||||||||||
BL00243___iol 601 AGCTTTTTTGAAAAACGCGTTCACTATGTTGATCGCAAAGAGCCGAGCGA 650
BSNT_06097___ 651 GCGCGAGCTTCAAGGTGCGGCGGAGCTGATTAAATCCAGCAAAAAACCTG 700
|||.||.||..|.||.|||||.||.|||||.||.||.|||||||||||..
BL00243___iol 651 GCGTGAACTGAAGGGAGCGGCAGAACTGATCAAGTCGAGCAAAAAACCGC 700
BSNT_06097___ 701 TGATTCTCGTCGGCGGAGGCGCAAAATATTCCGGTGCGCGCGATGAATTG 750
|.||..|.||||||||.||.||.|||||||||||.||||||||.||||||
BL00243___iol 701 TCATCTTGGTCGGCGGCGGAGCGAAATATTCCGGCGCGCGCGACGAATTG 750
BSNT_06097___ 751 GTTGCCATTTCTGAAGCCTATAACATTCCGTTAGTTGAAACACAGGCAGG 800
.|.|||||.||||||||.||.||.||||||.|.||.|||||.|||||.||
BL00243___iol 751 ATCGCCATGTCTGAAGCTTACAATATTCCGCTGGTAGAAACCCAGGCCGG 800
BSNT_06097___ 801 AAAGTCTACTGTTGAGGCAGATTTTGCGAACAACCTTGGCGGAATGGGCA 850
.||.||.||.||.||.||.||||||||.|||||..|.|||||||||||.|
BL00243___iol 801 TAAATCCACAGTAGAAGCCGATTTTGCCAACAATTTGGGCGGAATGGGAA 850
BSNT_06097___ 851 TCACAGGTACACTTGCGGCAAACAAAGCGGCCCGCCAAGCTGATTTGATT 900
||||.|||||.||.|||||||||||||||||.|||...||.||..||||.
BL00243___iol 851 TCACCGGTACGCTGGCGGCAAACAAAGCGGCTCGCGGGGCAGACCTGATC 900
BSNT_06097___ 901 ATCGGCATCGGCACAAGGTATACAGATTTTGCGACATCCTCTAAGACCGC 950
|||||.||.|||||..|.|||||.||||||||||||||.||.||.|||||
BL00243___iol 901 ATCGGAATTGGCACGCGCTATACCGATTTTGCGACATCATCAAAAACCGC 950
BSNT_06097___ 951 TTTTGATTTTGATAAAGCGAAGTTTTTGAACATTAACGTCAGCCGAATGC 1000
||||||.|||||.||.||.||.|||||.||||||||.||||||.||||||
BL00243___iol 951 TTTTGACTTTGACAACGCAAAATTTTTAAACATTAATGTCAGCAGAATGC 1000
BSNT_06097___ 1001 AGGCGTATAAACTTGATGCATTCCAAGTGGTAGCGGATGCGAAAGTGACG 1050
||||.||||||||.|||||.||||||||.||.||.|||||.|||||.|||
BL00243___iol 1001 AGGCTTATAAACTGGATGCTTTCCAAGTCGTTGCCGATGCAAAAGTAACG 1050
BSNT_06097___ 1051 CTTGGCAAACTGCACGGCTTGCTTGAAGGCTATGAGAGCGAGTTCGGCAC 1100
||.|||||||||||||||||..|.|||||||||.|||||||||||||..|
BL00243___iol 1051 CTCGGCAAACTGCACGGCTTATTGGAAGGCTATAAGAGCGAGTTCGGTTC 1100
BSNT_06097___ 1101 AACGTTCCGGGAGCTGAAGGACGAATGGCTAGCTGAACGCGAACGTCTCA 1150
|||..||..|||||||||.|||||||||||.|||||||||||.||..|.|
BL00243___iol 1101 AACCATCAAGGAGCTGAAAGACGAATGGCTTGCTGAACGCGACCGCTTAA 1150
BSNT_06097___ 1151 GCAAAGTGACGTTTAAGCGGGAAGCATTTGA-TCCGGAAATCAAAAATCA 1199
||||.||.||.||||||||.||| .|.||.| |||.|||||.|||.||||
BL00243___iol 1151 GCAAGGTAACATTTAAGCGCGAA-AACTTCACTCCTGAAATTAAAGATCA 1199
BSNT_06097___ 1200 TTTTTCTCAAGAGGTCCTGAATGAATATGCTGACGCGTTGAATACTGAGC 1249
.|||||||||||..|.||.||.||||||||.||.|.|.||.|.||.||.|
BL00243___iol 1200 CTTTTCTCAAGACATACTCAACGAATATGCGGATGTGCTGCAAACCGAAC 1249
BSNT_06097___ 1250 TTCCGCAAACAACGGCATTGCTGACAATCAACGAGAC----GATTCCTGA 1295
|.||||||||||||||||||||..|.|||||.||.|| |||.|
BL00243___iol 1250 TGCCGCAAACAACGGCATTGCTCGCCATCAATGAAACAGTTGATCC---- 1295
BSNT_06097___ 1296 AGACAGTGTCATCATCTGTTCAGCAGGCTCACTCCCAGGAGATTTGCAGC 1345
.|||||.|||.||||.||||||||||||||..|.||.||||||.||||||
BL00243___iol 1296 GGACAGCGTCGTCATTTGTTCAGCAGGCTCTTTGCCGGGAGATCTGCAGC 1345
BSNT_06097___ 1346 GTCTGTGGCATTCTAATGTTCCGAATACGTATCACCTGGAGTATGGGTAT 1395
|.|||||||||||.||.||.|||||||||||.||||||||.||.||.|||
BL00243___iol 1346 GGCTGTGGCATTCAAACGTACCGAATACGTACCACCTGGAATACGGCTAT 1395
BSNT_06097___ 1396 TCTTGCATGGGCTATGAAGTGTCCGGGACACTCGGTCTT-AAACTGGCCC 1444
||.||||||||.||||||||.||.||.||.||||| ||| |||.||||.|
BL00243___iol 1396 TCCTGCATGGGATATGAAGTATCGGGAACGCTCGG-CTTGAAATTGGCGC 1444
BSNT_06097___ 1445 ACCCTGACAGAGAAGTGTATTCAATCGTCGGAGACGGCAGCTTCCTGATG 1494
|.|||||.||||||||.||||||.|.|||||||||||.||||||||||||
BL00243___iol 1445 ATCCTGATAGAGAAGTTTATTCACTGGTCGGAGACGGAAGCTTCCTGATG 1494
BSNT_06097___ 1495 CTTCATTCTGAATTGATCACGGCGATTCAGTACAACAAGAAAATCAATGT 1544
||.||.||.||..|.||.||.||.||.||.||.||.||.|||||.||.||
BL00243___iol 1495 CTCCACTCAGAGCTCATTACAGCAATCCAATATAATAAAAAAATTAACGT 1544
BSNT_06097___ 1545 GCTGCTCTTTGACAACTCAGGATTCGGATGCATCAACAACCTGCAAATGG 1594
|||||||||||||||||||||||||||.|||||||||||.||||||||||
BL00243___iol 1545 GCTGCTCTTTGACAACTCAGGATTCGGCTGCATCAACAATCTGCAAATGG 1594
BSNT_06097___ 1595 ATCACGGCAGCGGCAGCTACTATTGCGAGTTCCGAACAGATGACAACCAA 1644
|.||.||.|.||||||||||||.||.||.|||.||||||..|||||.||.
BL00243___iol 1595 ACCATGGAAACGGCAGCTACTACTGTGAATTCAGAACAGCAGACAATCAG 1644
BSNT_06097___ 1645 ATCCTGAATGTCGATTACGCGAAAGTCGCTGAGGGATACGGCGCGAAAAC 1694
||.||.|||||||||||.||||||||.||.||.||.||.||.||||||||
BL00243___iol 1645 ATTCTCAATGTCGATTATGCGAAAGTGGCCGAAGGCTATGGAGCGAAAAC 1694
BSNT_06097___ 1695 CTACCGCGCAAACACAGTAGAAGAATTAAAAGCGGCGTTAGAGGATGCGA 1744
||||...||.|||||..|.||||||||||||||||||.|.||.|||||.|
BL00243___iol 1695 CTACAAAGCGAACACGATTGAAGAATTAAAAGCGGCGCTGGAAGATGCCA 1744
BSNT_06097___ 1745 AGAAACAGAATGTATCAACATTAATTGAAATGAAGGTGCTGCCTAAAACA 1794
|.|||||..||||.||||||||.||||||||||||||||||||.|||||.
BL00243___iol 1745 AAAAACAAGATGTCTCAACATTGATTGAAATGAAGGTGCTGCCGAAAACG 1794
BSNT_06097___ 1795 ATGACGGACGGCTATGACAGCTGGTGGCATGTCGGAGTGGCAGAGGTATC 1844
|||||||||||||||||||||||||||||.||.||.||.||||||||.||
BL00243___iol 1795 ATGACGGACGGCTATGACAGCTGGTGGCACGTAGGTGTTGCAGAGGTTTC 1844
BSNT_06097___ 1845 TGAACAAGAAAGCGTTCAGAAAGCATACGAAGCAAAAGAGAAAAAGCTGG 1894
.|||||.||||||||.||.||.||.||..||||||||||.||||.|||||
BL00243___iol 1845 CGAACAGGAAAGCGTGCAAAAGGCGTATAAAGCAAAAGAAAAAATGCTGG 1894
BSNT_06097___ 1895 AATCTGCGAAGCAGTATTAG 1914
|||||||.|||||||||||.
BL00243___iol 1895 AATCTGCAAAGCAGTATTAA 1914
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