Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06095 and BL00242
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:06
# Commandline: needle
# -asequence dna-align/BSNT_06095___iolE.1.5803.seq
# -bsequence dna-align/BL00242___iolE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06095___iolE-BL00242___iolE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06095___iolE-BL00242___iolE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06095___iolE
# 2: BL00242___iolE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 908
# Identity: 682/908 (75.1%)
# Similarity: 682/908 (75.1%)
# Gaps: 19/908 ( 2.1%)
# Score: 2525.0
#
#
#=======================================
BSNT_06095___ 1 ATGGGCAAAAATGAAATCCTGTGGGGAATCGCTCCCATTGGGTGGCGGAA 50
||||||||.|...||||.||.|||||.|||||.|||||.||.||||||||
BL00242___iol 1 ATGGGCAAGACACAAATTCTATGGGGCATCGCCCCCATAGGATGGCGGAA 50
BSNT_06095___ 51 TGATGACATGCCTGAAATTGGAGCGGGAAATACACTTCAGCATTTGTTAA 100
.|||||.||.||.|||||.||.||||||||.|||||||||||||||||.|
BL00242___iol 51 CGATGATATTCCGGAAATCGGCGCGGGAAACACACTTCAGCATTTGTTGA 100
BSNT_06095___ 101 GTGATATCGTTGTCGCACGTTTTCAAGGCACGGAGGTCGGGGGCTTTTTC 150
|.||.||.|||||.||..|.||||||||||||||.||.||.||||||||.
BL00242___iol 101 GCGACATTGTTGTTGCGGGCTTTCAAGGCACGGAAGTGGGCGGCTTTTTT 150
BSNT_06095___ 151 CCCGAACCTGCCATCCTGAACAAAGAGCTGAAGCTTCGGAACTTACGCAT 200
||.|||||.|||||.||.||.||||||||..||||..||||..||.|.||
BL00242___iol 151 CCGGAACCGGCCATTCTCAATAAAGAGCTCGAGCTGAGGAATCTAAGGAT 200
BSNT_06095___ 201 TGCAGGAAAATGGTTCAGCAGTTTTATTTTGCGTGACGGACTTGGTGAAG 250
|||.||.||.|||||||||||.|.|||..|.||.|||||..|||..||||
BL00242___iol 201 TGCCGGCAAGTGGTTCAGCAGCTATATCATTCGGGACGGCATTGAAGAAG 250
BSNT_06095___ 251 CGGCAAAGACATTTAC-CCTGCATTGTGAGTATTTGCAGCAAGTAAACGC 299
|.||.|||..||||.| .|| ||.||..||||.||..|..|.||..|.||
BL00242___iol 251 CAGCCAAGGAATTTGCGGCT-CACTGCCAGTACTTAAAAGACGTCCATGC 299
BSNT_06095___ 300 GGATGTCGCAGTTGTCTCTGAACAAACGTACAGCGTGCAAGGCTTGGAGA 349
.|||||.||.||.||.||.|||||.||||||||.|||||.||||||||.|
BL00242___iol 300 CGATGTTGCGGTCGTATCAGAACAGACGTACAGTGTGCAGGGCTTGGATA 349
BSNT_06095___ 350 AAAATGTGTTCACAGAGAAGCCGCACTTTACGGATGATGAATGGGAGCGG 399
||||.|||||.|.|||.|||||..|.||.||.|||||.||||||.|||||
BL00242___iol 350 AAAACGTGTTTAAAGAAAAGCCTTATTTCACCGATGAAGAATGGCAGCGG 399
BSNT_06095___ 400 CTTTGCGAAGGGCTGAATCACCTTGGCGAAATTGCCGCTCAGC----ATG 445
||.|..|||||..|.||||||||.||.|||||.|||| || |.|
BL00242___iol 400 CTATTTGAAGGTTTAAATCACCTCGGGGAAATCGCCG----GCCGTTACG 445
BSNT_06095___ 446 GCTTGAAGCTTGTCTATCATCATCATCTCGGCACTGGTGTCCAAACAGCG 495
|..|||||||||||||.|||||.||.||||||||.||.||.||.||||.|
BL00242___iol 446 GACTGAAGCTTGTCTACCATCACCACCTCGGCACAGGCGTGCAGACAGAG 495
BSNT_06095___ 496 GAAGAAGTGGACCGCCTGATGGCAGGAACAGACCCTGCGCATGTACACCT 545
|||||.||||||||.||.|||||.|||||.|||||.||.|.|||.|||||
BL00242___iol 496 GAAGAGGTGGACCGGCTCATGGCGGGAACTGACCCGGCACTTGTGCACCT 545
BSNT_06095___ 546 CCTCTATGATACAGGCCATGCGTATATTTCTGACGGCGATTACATGGGGA 595
.||.||.|||||.||.|||||.||.|||||.||.||..||||.|||...|
BL00242___iol 546 TCTGTACGATACGGGGCATGCCTACATTTCAGATGGAAATTATATGAACA 595
BSNT_06095___ 596 TGCTTGAGAAGCATATCGGCCGCATTAAGCATGTGCACTTTAAGGATGCC 645
|..|.|||||||||||.|.|||.||||.|||.||.||.|||||.||.||.
BL00242___iol 596 TTTTAGAGAAGCATATTGACCGTATTAGGCACGTTCATTTTAAAGACGCG 645
BSNT_06095___ 646 CGCCTGAATGTCATGGAACAATGCAGGCTCGAAGGACAATCGTTCCGGCA 695
|||||.||..|||||||..||||||.||..||||||.|.|||||||..||
BL00242___iol 646 CGCCTTAAGATCATGGAGAAATGCAAGCGGGAAGGAAATTCGTTCCAACA 695
BSNT_06095___ 696 ATCATTTTTAAAAGGCATGTTTACGGTTCCCGGTGATGGCTGCATTGACT 745
..|.|||.|..||||.|||||.||.|||||.||.||.||||||||.||.|
BL00242___iol 696 GGCGTTTCTGCAAGGGATGTTCACAGTTCCAGGCGACGGCTGCATCGATT 745
BSNT_06095___ 746 TTAGAGAAGTATATCAGCTGCTGTTGAAGCACAGTTATTCCGGATGGATT 795
||||||||||||||||...|||.||.||||||.|.||||||||.|||||.
BL00242___iol 746 TTAGAGAAGTATATCAAACGCTTTTAAAGCACGGCTATTCCGGCTGGATC 795
BSNT_06095___ 796 GTCATTGAAGCTGAACAGGACCCCGATGTTGCCAACCCGCTGGAGTATGC 845
||..|.|||||.||.|||||.||||||||||||||||||||.||.||.||
BL00242___iol 796 GTAGTGGAAGCCGAGCAGGATCCCGATGTTGCCAACCCGCTTGAATACGC 845
BSNT_06095___ 846 ATTGATTGCGAGAAACTATATTGATCAGCAGTTGTTGGATCTGGC----- 890
||||||.||.|||||.||.||.||||..||.||||||.||.|..|
BL00242___iol 846 ATTGATCGCCAGAAAGTACATCGATCGTCACTTGTTGAATGTCCCAGCAA 895
BSNT_06095___ 891 ----TTAA 894
||||
BL00242___iol 896 CCAATTAA 903
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