Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06089 and BL00238

See Amino acid alignment / Visit BSNT_06089 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:05
# Commandline: needle
#    -asequence dna-align/BSNT_06089___iolI.1.5803.seq
#    -bsequence dna-align/BL00238___iolI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06089___iolI-BL00238___iolI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06089___iolI-BL00238___iolI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06089___iolI
# 2: BL00238___iolI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 837
# Identity:     666/837 (79.6%)
# Similarity:   666/837 (79.6%)
# Gaps:           0/837 ( 0.0%)
# Score: 2646.0
# 
#
#=======================================

BSNT_06089___      1 ATGAAACTTTGTTTTAATGAAGCGACAACATTGGAAAACTCAAACCTTAA     50
                     |||||.||.||.|||||||||||.||.||.||||||||.|||||||||..
BL00238___iol      1 ATGAAGCTATGCTTTAATGAAGCAACGACGTTGGAAAATTCAAACCTTGC     50

BSNT_06089___     51 ACAGGATTTAGAATTATGCGAAAAGCACGGCTATGATTATATTGAAATCC    100
                     |.|.||..|.||||..||.||.||||||||.||.||||||||.|||||||
BL00238___iol     51 AAAAGACCTCGAATACTGTGAGAAGCACGGATACGATTATATCGAAATCC    100

BSNT_06089___    101 GCACAATGGATAAGCTGCCGGAGTACTTAAAAGATCATTCATTGGCAGAT    150
                     |.||.||||||||||||||.||||||||||||||.|||.|..|..||||.
BL00238___iol    101 GGACGATGGATAAGCTGCCTGAGTACTTAAAAGACCATGCTCTCTCAGAG    150

BSNT_06089___    151 CTTGCGGAATATTTTCAAACCCATCACATCAAACCGCTTGCCTTAAACGC    200
                     .|.||.||.|||||||||||.|||||.||.||.|||||.|||||.||.||
BL00238___iol    151 TTAGCCGAGTATTTTCAAACTCATCATATTAAGCCGCTGGCCTTGAATGC    200

BSNT_06089___    201 ACTCGTTTTCTTCAACAACCGTGATGAAAAGGGCCACAACGAGATCATCA    250
                     .||.||.||.|||||||||||.||||||||.||.|||...||.||||||.
BL00238___iol    201 CCTTGTCTTTTTCAACAACCGCGATGAAAAAGGGCACCGTGAAATCATCG    250

BSNT_06089___    251 CTGAATTTAAAGGCATGATGGAAACATGCAAAACCCTCGGTGTGAAATAT    300
                     ..|||||||||||||||||||||||.|||||||..||.|||||||||||.
BL00238___iol    251 AAGAATTTAAAGGCATGATGGAAACGTGCAAAATGCTTGGTGTGAAATAC    300

BSNT_06089___    301 GTGGTGGCCGTTCCGCTTGTGACAGAGCAGAAGATTATAAAAGAAGAGAT    350
                     |||||.||.||.||||||||.||.||.||.||.||..||||||||||.||
BL00238___iol    301 GTGGTCGCGGTACCGCTTGTCACCGAACAAAAAATCTTAAAAGAAGATAT    350

BSNT_06089___    351 CAAAAAGAGCAGTGTAGACGTGCTGACTGAGCTGTCAGATATCGCGGAGC    400
                     .|||...|||...||.||.||||||||.|||||||||||.|||||.||||
BL00238___iol    351 TAAAGCAAGCTCCGTCGAAGTGCTGACAGAGCTGTCAGACATCGCTGAGC    400

BSNT_06089___    401 CGTACGGCGTAAAAATAGCGCTTGAATTTGTCGGCCATCCGCAATGTACG    450
                     |||||||||||||.||.||..|.||.||||||||.||.|||.|.||||||
BL00238___iol    401 CGTACGGCGTAAAGATCGCTGTCGAGTTTGTCGGTCACCCGGAGTGTACG    450

BSNT_06089___    451 GTCAATACGTTTGAACAGGCGTATGAGATCGTAAACACAGTTAACCGTGA    500
                     |||||||||||....|||||.|||||.|||||.|..||.||.|||||.||
BL00238___iol    451 GTCAATACGTTCAGCCAGGCCTATGACATCGTCATGACCGTGAACCGCGA    500

BSNT_06089___    501 CAATGTCGGGCTTGTCCTTGACAGTTTTCACTTCCATGCAATGGGTTCAA    550
                     .||||||||.|||||..|||||||.||.||.||||||||||||||.||||
BL00238___iol    501 TAATGTCGGCCTTGTTTTTGACAGCTTCCATTTCCATGCAATGGGCTCAA    550

BSNT_06089___    551 ATATTGAGAGCTTAAAGCAGGCGGACGGAAAGAAAATCTTCATCTATCAT    600
                     .|.|||||...|||||..||||||||||.||||||||||||||.||||||
BL00238___iol    551 GTCTTGAGGATTTAAAAAAGGCGGACGGCAAGAAAATCTTCATTTATCAT    600

BSNT_06089___    601 ATTGATGATACAGAAGATTTCCCAATCGGCTTTTTAACAGATGAGGATCG    650
                     ||.|||||.||.|||||.||.||||||||.|||||||.||||||.||.||
BL00238___iol    601 ATCGATGACACGGAAGACTTTCCAATCGGATTTTTAAGAGATGAAGACCG    650

BSNT_06089___    651 TGTATGGCCGGGACAAGGGGCAATTGACTTAGATGCCCACTTATCAGCAC    700
                     |||.|||||||||||.||.||.||.|||||.|||||||||||||||.|..
BL00238___iol    651 TGTTTGGCCGGGACAGGGAGCCATCGACTTGGATGCCCACTTATCAACTT    700

BSNT_06089___    701 TGAAGGAAATCGGCTTCTCTGATGTTGTTTCGGTTGAGCTCTTCCGGCCT    750
                     ||||.||.|||||.||.||.|||||.||.||.|||||..|.|||.|.|||
BL00238___iol    701 TGAAAGACATCGGTTTTTCGGATGTCGTATCAGTTGAATTGTTCAGACCT    750

BSNT_06089___    751 GAATACTATAAGCTGACTGCTGAGGAAGCCATTCAAACAGCGAAAAAAAC    800
                     ||||||||||||||||..||.||.|||.|.||||.|||.||.|||.||||
BL00238___iol    751 GAATACTATAAGCTGAGCGCGGAAGAAACGATTCGAACGGCCAAAGAAAC    800

BSNT_06089___    801 AACAGTGGATGTCGTATCAAAATACTTCAGCATGTAA    837
                     ||||||.||.||.||.|||||||||||||..||.|||
BL00238___iol    801 AACAGTTGAAGTTGTTTCAAAATACTTCAAGATTTAA    837


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